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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0393300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:19334558:19338593:-1 gene:Os04g0393300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MUB4 description:Membrane-anchored ubiquitin-fold protein, HCG-1 domain containing protein. (Os04t0393300-01);Similar to OSIGBa0145N07.12 protein. (Os04t0393300-03)
Sequence

ATGGCGGAGAAGGAGGAGGGCAAGGTGGCGGCGGAGGGTGGGGCGGAGGCGGAGGCCGAC
GAGGAGGTGGAGGTCAAGTTCCGCCTCTTCGACGGCTCCGACATCGGGCCCCTCCGCTGC
AACGCCGTCGCCACCACCGTCGCCGCCCTCAAGGACCGCGTCGTCGCCGACTGGCCCAAA
GATAAAACAATTGTCCCGAAGACTGCTAATGATGTCAAACTGATAAGTGGAGGAAAAATT
CTAGAAAACGACAAGAACATTGCGCAGTGCAGAGCACCTTTTGGTGATCTTCCGAGCACT
GCTATCACAATGCACGTTGTTGTGCAGCCATCATCAGCCAAATCAAAACCTGACAAGAAG
ACCAACAAGTTGCCAAAGACCACTCGCTGCTCATGTACCATACTATGA

Peptide Sequence

PEP ID

Os04t0393300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:19334558:19338593:-1 gene:Os04g0393300 transcript:Os04t0393300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MUB4 description:Membrane-anchored ubiquitin-fold protein, HCG-1 domain containing protein. (Os04t0393300-01);Similar to OSIGBa0145N07.12 protein. (Os04t0393300-03)
Sequence

MAEKEEGKVAAEGGAEAEADEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPK
DKTIVPKTANDVKLISGGKILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKK
TNKLPKTTRCSCTIL

Transcript Sequence

Transcript ID

Os04t0393300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:19334558:19338593:-1 gene:Os04g0393300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MUB4 description:Membrane-anchored ubiquitin-fold protein, HCG-1 domain containing protein. (Os04t0393300-01);Similar to OSIGBa0145N07.12 protein. (Os04t0393300-03)
Sequence

CAAAGGAAAAGAGAGAGCCCTCCTCTCCTCTCCTACCCTCTTCTTCCTCCTCCTCCTCCT
CGCCTCCCACCAAACCCTAGCACGAGCAGCCCAATCCATCTCCAGCCTCACGAGCTCCAG
TTCGGAGCAGCCTCGCGGTGGGACGAGTCGCCAGTTGGGGAGCTCGGAGGAGGTGAGGCC
GTGGTTGGGGGTTGGGAAGGGGGGAAGGCCAAGAAATGGCGGAGAAGGAGGAGGGCAAGG
TGGCGGCGGAGGGTGGGGCGGAGGCGGAGGCCGACGAGGAGGTGGAGGTCAAGTTCCGCC
TCTTCGACGGCTCCGACATCGGGCCCCTCCGCTGCAACGCCGTCGCCACCACCGTCGCCG
CCCTCAAGGACCGCGTCGTCGCCGACTGGCCCAAAGATAAAACAATTGTCCCGAAGACTG
CTAATGATGTCAAACTGATAAGTGGAGGAAAAATTCTAGAAAACGACAAGAACATTGCGC
AGTGCAGAGCACCTTTTGGTGATCTTCCGAGCACTGCTATCACAATGCACGTTGTTGTGC
AGCCATCATCAGCCAAATCAAAACCTGACAAGAAGACCAACAAGTTGCCAAAGACCACTC
GCTGCTCATGTACCATACTATGAAGGTTCAGTGTCAACTCCATCGACAATAATTTGTATG
TCCGTGAAAATTATGCAGAGAGACAACGAATGGAGAGAAGATTGAAGAAAATCTGGTGCC
AGAGGAGTCCGATGTGTTGTGAGATTGTATTGTAATTGTAAGCTTAGATACTACAGAGAG
TTCGTCCCTCTGCGGCTAGGGAAAAATAGATGTCGTTCGGTCGGTTGCTTGTCTGTTTTA
CCCAACAAAATGTTTCTATATGATGTACAATATACACATACATGCTGTTCTGGAGGAAGA
AGTTGGTTGTTTTTC