Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0390700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:19233125:19235143:1 gene:Os04g0390700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 62 description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os04t0390700-01)
Sequence	ATGGAGACGCTGAGCATGCTGAAGGTGGGGTACACCCTGCTGCGGAGCGAGACGCCGGCG ACGGACCTCGTCAACGCCTTCATGGACTGGGCGGCGCGCCGCTCGCTGCTCCTCCTCGCC GTCTTCGTGCCGCCCTACCTCGCCTACAGGCTCGCCTCCTCGGCGCTAGCCGCCGCGTCG CCGGAGGACGTCGCCGGCAAGGTCGTCCTCGTCACGGGCGCCTCGTCGGGGATCGGCGAG CAGGTCGCGTACCGGTACGCGCGGAGGGGCGCGCGGCTGGCGCTGGTGGCGAGGAGGGAG GCGAGCCTGGGGGAGGTGGCGGCGAGGGCGAGGGCGCTCGGCTCGCCCGACGTGCTCGCC GTCCCCGGCGACGTCGCGAGGCCCGACGACTGCCGGCGCTTCGTCCAGGCCACCGTCGAA CACTTCGGCCGCCTGGATCATCTTGTGAACAATGCTGGCTTGGCCAACGTGTGCTGGTTT GAGGAGGTGCCAGATGTTGCTAATTTCAAACAAGTCTTGGATGTGAACTTCTGGGGTACG GTTCACCCGACGCACGCCGCTCTCCCCCATCTCAAGGCGAGCCGCGGGAAGATCTTCGTC AACTCCTCGGCATCGGCTGTGCTCGCCATGCCAAGGATGAGTTTCTACAATGCTAGCAAG GCCGCGGTGCACAACTTCGCCGAGACGCTGCGGATGGAGCTCCACGGCGAGGTCGGCGTG ACGGTGGCGACGCCGGGGTGGGTGGACTCGGAGATGACCAAGGGGAAGCACCTGTCCAGC CATGGCGCAATGGAAGTCGACCAGGACACCAGGGATGCTCAGGTGGGGGTGTTCCCGGTG GAGCGCGGCGAGCGGTGCGCGGAGGCGATCGTGGACGCGGTGGCGCGCGGGCGGCGGCGG GTCACCTCGCCGGCGTGGTACGGGGCGCTGTTCCTGTGGCGGACGATGGCGCCCGAGGTG GCGGACGCGTGCCAGCGCGTGTTCTACCACCGGCGGAGCTCCGCCGCCGGCGGCGGAGGG AGGGCGAGGGCGGCGCTGGAGGCCACCGGCGCCAAGGCCGTGCTGCAGCCGCCGTCGCTG CGCAGCTCGGAGATCAAAGTGGAGTAG

Peptide Sequence

PEP ID	Os04t0390700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:19233125:19235143:1 gene:Os04g0390700 transcript:Os04t0390700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 62 description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os04t0390700-01)
Sequence	METLSMLKVGYTLLRSETPATDLVNAFMDWAARRSLLLLAVFVPPYLAYRLASSALAAAS PEDVAGKVVLVTGASSGIGEQVAYRYARRGARLALVARREASLGEVAARARALGSPDVLA VPGDVARPDDCRRFVQATVEHFGRLDHLVNNAGLANVCWFEEVPDVANFKQVLDVNFWGT VHPTHAALPHLKASRGKIFVNSSASAVLAMPRMSFYNASKAAVHNFAETLRMELHGEVGV TVATPGWVDSEMTKGKHLSSHGAMEVDQDTRDAQVGVFPVERGERCAEAIVDAVARGRRR VTSPAWYGALFLWRTMAPEVADACQRVFYHRRSSAAGGGGRARAALEATGAKAVLQPPSL RSSEIKVE

Transcript Sequence

Transcript ID	Os04t0390700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:19233125:19235143:1 gene:Os04g0390700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 62 description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os04t0390700-01)
Sequence	AGAGCTCAGATCAGCAATTCAGCATACATACGACGTCGACGTACGACGACGAGGAAGAAG AGGAGATCGGAGGAGGCAGGCAGCTGCCGAGATCGATCGACCGCCATGGAGACGCTGAGC ATGCTGAAGGTGGGGTACACCCTGCTGCGGAGCGAGACGCCGGCGACGGACCTCGTCAAC GCCTTCATGGACTGGGCGGCGCGCCGCTCGCTGCTCCTCCTCGCCGTCTTCGTGCCGCCC TACCTCGCCTACAGGCTCGCCTCCTCGGCGCTAGCCGCCGCGTCGCCGGAGGACGTCGCC GGCAAGGTCGTCCTCGTCACGGGCGCCTCGTCGGGGATCGGCGAGCAGGTCGCGTACCGG TACGCGCGGAGGGGCGCGCGGCTGGCGCTGGTGGCGAGGAGGGAGGCGAGCCTGGGGGAG GTGGCGGCGAGGGCGAGGGCGCTCGGCTCGCCCGACGTGCTCGCCGTCCCCGGCGACGTC GCGAGGCCCGACGACTGCCGGCGCTTCGTCCAGGCCACCGTCGAACACTTCGGCCGCCTG GATCATCTTGTGAACAATGCTGGCTTGGCCAACGTGTGCTGGTTTGAGGAGGTGCCAGAT GTTGCTAATTTCAAACAAGTCTTGGATGTGAACTTCTGGGGTACGGTTCACCCGACGCAC GCCGCTCTCCCCCATCTCAAGGCGAGCCGCGGGAAGATCTTCGTCAACTCCTCGGCATCG GCTGTGCTCGCCATGCCAAGGATGAGTTTCTACAATGCTAGCAAGGCCGCGGTGCACAAC TTCGCCGAGACGCTGCGGATGGAGCTCCACGGCGAGGTCGGCGTGACGGTGGCGACGCCG GGGTGGGTGGACTCGGAGATGACCAAGGGGAAGCACCTGTCCAGCCATGGCGCAATGGAA GTCGACCAGGACACCAGGGATGCTCAGGTGGGGGTGTTCCCGGTGGAGCGCGGCGAGCGG TGCGCGGAGGCGATCGTGGACGCGGTGGCGCGCGGGCGGCGGCGGGTCACCTCGCCGGCG TGGTACGGGGCGCTGTTCCTGTGGCGGACGATGGCGCCCGAGGTGGCGGACGCGTGCCAG CGCGTGTTCTACCACCGGCGGAGCTCCGCCGCCGGCGGCGGAGGGAGGGCGAGGGCGGCG CTGGAGGCCACCGGCGCCAAGGCCGTGCTGCAGCCGCCGTCGCTGCGCAGCTCGGAGATC AAAGTGGAGTAGATGACGATGTGAAGGCGCGCGGCTTCTTTTGCTGTTGCAAGCTTTGTG TTGAGAAAGAAAAAATGGGGAATAAAAGTTTGGGAAAATGTACGTGCTTGTGGTGATCGA TC