Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0390500-04
CDS Infomation	cds chromosome:IRGSP-1.0:4:19221064:19225308:1 gene:Os04g0390500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 6 description:Similar to OSIGBa0132D06.2 protein. (Os04t0390500-01);Mn-nicotianamine transporter, Detoxification of excess manganese (Os04t0390500-02);Iron-phytosiderophore transporter protein yellow stripe 1. (Os04t0390500-03);Similar to OSIGBa0132D06.2 protein. (Os04t0390500-04)
Sequence	GTGGAGAGGGTGCCGGCGTGGAGGGAGCAGGTGACGGTGCGGGGGATCGTGGTGAGCGCG GTGCTGGGCGTGCTGTTCTGCCTCATCACGCACAAGCTGAACCTCACGGTGGGGGTGATC CCGTCGCTCAACGTCTCTGCGGGGCTGCTCGGGTACTTCCTGGTGCGGTCGTGGACGGCG GTGCTCGGGAGGCTAGGGTTCGTCATCGCGCCCTTCACCAAGCAGGAGAACACCGTCATC CAGACCTGCGTCGTCGCCTGCTACGGCCTCGCCTTCAGCGGGGGTTTTGGGTCATATATG CTTGCAATGGATCAGAAAACATACGAACTTATTGGGCCAGATTATCCTGGTAACAGGGCG ATCGATGTTATGAATCCTTCATTGGGTTGGATGATCGGGTTCATGTTTGTTGTTAGCTTC CTTGGACTATTTAGTCTTGTTGCACTGCGCAAGGTAATGGTGATTGATTACAAGTTGACC TATCCCAGTGGAACTGCGACAGCTATGTTGATAAATAGCTTCCACACTACCAGTGGAGCA GAGCTTGCAGAAAAGCAAGTTAGCTGTCTCGGAAAGTATTTGAGCATTAGTTTTTTCTGG AACTGCTTCAAGTGGTTCTTCAGCGGCGTTGGGGATTCTTGTGGTTTTGACAATTTCCCA TCTCTGGGACTTGCAGCATTTAAGAACACGTTTTATTTTGATTTCAGTCCAACCTATATT GGATGTGGTCTTATATGCCCACATATTGTTAACTGCTCTACACTTCTTGGAGCAATCATA TCTTGGGGTTTCCTCTGGCCATATATATCTACAAAAGCTGGGGACTGGTATCCAGCTAAC CTAGGAAGCAATGATTTCAAAGGGCTATACGGATACAAGGTTTTTATATCTGTATCTGTG ATACTTGGTGATGGTCTTTATAACCTCATCAAGATCATCTATGCTACTATCAAGGAAGTA ATGAATGCACGGTCGAAGCAAGGAAGACTTCCCCTTGTGCGGGTTCATGATGATGATGAA GGCTCTAAATTATCAGCTGAAGAAAAGCTTCGGAATGACACGTTTCTAAAAGACAGAATT CCATCATGGTTAGCAGGATCAGGTTATGTTGGCCTTGCAGCAATCTCAACAGCAACTGTG CCAATGATCTTCCCGCAGGTCAAGTGGTACCTTGTCCTGTGTGCCTATGTTGTAGCTCCC CTGCTCGCCTTCTGCAACTCATACGGCTGTGGCCTCACAGACTGGAACCTTGCGTCCACG TATGGAAAGATTGGCCTTTTTATTTTTGCCTCCTTGGTTGGCCGAAGCGGTGGCGTGATT GCTGGCCTAGCAGCTTGCGGTGTTATGATGTCCATCGTATCCACCGCTGCCGATCTCATG CAGGACTTCAGGACTGGTTACCTGACCCTCTCTTCACCAAGGTCCATGTTTGTGTCACAG TTGATTGGGACCACCCTTGGCTGCATCATCGCCCCTCTGACCTTTTGGCTCTACTGGACT GCTTTCGATATCGGCAATCCTGATGGCATGTTCAAGGCTCCATATGCCGTCATCTACCGT GAGATGTCAATCCTGGGTGTCGAAGGATTCTCAGCGCTGCCCCAACATTGCCTGGCGATC TGCTCGGTCTTCTTTGTCGCAGCTATTTTGATCAACCTCCTGCGGGACGTCACTCCGAAG AGCGTCTCCAAGTTCATCCCGCTCCCGATGGCTATGGCTGTCCCATTCTACATTGGGGCG TACTTTGCGATCGACATGTTCGTTGGGACGGTTATCCTGTTTGTCTGGGAGAGGGTGAAC CGCAAGGAATCTGAGGACTTTGCAGGCGCGATTGCATCTGGTTTGATCTGCGGTGATGGG ATCTGGAGTGTTCCATCTGCGATATTGTCCATCATGAGGATTGACCCACCAATGTGCATG TACTTCAAGCCATCCCTTACCAGCTGA

Peptide Sequence

PEP ID	Os04t0390500-04
PEP Infomation	pep chromosome:IRGSP-1.0:4:19221064:19225308:1 gene:Os04g0390500 transcript:Os04t0390500-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 6 description:Similar to OSIGBa0132D06.2 protein. (Os04t0390500-01);Mn-nicotianamine transporter, Detoxification of excess manganese (Os04t0390500-02);Iron-phytosiderophore transporter protein yellow stripe 1. (Os04t0390500-03);Similar to OSIGBa0132D06.2 protein. (Os04t0390500-04)
Sequence	VERVPAWREQVTVRGIVVSAVLGVLFCLITHKLNLTVGVIPSLNVSAGLLGYFLVRSWTA VLGRLGFVIAPFTKQENTVIQTCVVACYGLAFSGGFGSYMLAMDQKTYELIGPDYPGNRA IDVMNPSLGWMIGFMFVVSFLGLFSLVALRKVMVIDYKLTYPSGTATAMLINSFHTTSGA ELAEKQVSCLGKYLSISFFWNCFKWFFSGVGDSCGFDNFPSLGLAAFKNTFYFDFSPTYI GCGLICPHIVNCSTLLGAIISWGFLWPYISTKAGDWYPANLGSNDFKGLYGYKVFISVSV ILGDGLYNLIKIIYATIKEVMNARSKQGRLPLVRVHDDDEGSKLSAEEKLRNDTFLKDRI PSWLAGSGYVGLAAISTATVPMIFPQVKWYLVLCAYVVAPLLAFCNSYGCGLTDWNLAST YGKIGLFIFASLVGRSGGVIAGLAACGVMMSIVSTAADLMQDFRTGYLTLSSPRSMFVSQ LIGTTLGCIIAPLTFWLYWTAFDIGNPDGMFKAPYAVIYREMSILGVEGFSALPQHCLAI CSVFFVAAILINLLRDVTPKSVSKFIPLPMAMAVPFYIGAYFAIDMFVGTVILFVWERVN RKESEDFAGAIASGLICGDGIWSVPSAILSIMRIDPPMCMYFKPSLTS

Transcript Sequence

Transcript ID	Os04t0390500-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:19221064:19225308:1 gene:Os04g0390500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 6 description:Similar to OSIGBa0132D06.2 protein. (Os04t0390500-01);Mn-nicotianamine transporter, Detoxification of excess manganese (Os04t0390500-02);Iron-phytosiderophore transporter protein yellow stripe 1. (Os04t0390500-03);Similar to OSIGBa0132D06.2 protein. (Os04t0390500-04)
Sequence	GGGTGGAGAGGGTGCCGGCGTGGAGGGAGCAGGTGACGGTGCGGGGGATCGTGGTGAGCG CGGTGCTGGGCGTGCTGTTCTGCCTCATCACGCACAAGCTGAACCTCACGGTGGGGGTGA TCCCGTCGCTCAACGTCTCTGCGGGGCTGCTCGGGTACTTCCTGGTGCGGTCGTGGACGG CGGTGCTCGGGAGGCTAGGGTTCGTCATCGCGCCCTTCACCAAGCAGGAGAACACCGTCA TCCAGACCTGCGTCGTCGCCTGCTACGGCCTCGCCTTCAGCGGGGGTTTTGGGTCATATA TGCTTGCAATGGATCAGAAAACATACGAACTTATTGGGCCAGATTATCCTGGTAACAGGG CGATCGATGTTATGAATCCTTCATTGGGTTGGATGATCGGGTTCATGTTTGTTGTTAGCT TCCTTGGACTATTTAGTCTTGTTGCACTGCGCAAGGTAATGGTGATTGATTACAAGTTGA CCTATCCCAGTGGAACTGCGACAGCTATGTTGATAAATAGCTTCCACACTACCAGTGGAG CAGAGCTTGCAGAAAAGCAAGTTAGCTGTCTCGGAAAGTATTTGAGCATTAGTTTTTTCT GGAACTGCTTCAAGTGGTTCTTCAGCGGCGTTGGGGATTCTTGTGGTTTTGACAATTTCC CATCTCTGGGACTTGCAGCATTTAAGAACACGTTTTATTTTGATTTCAGTCCAACCTATA TTGGATGTGGTCTTATATGCCCACATATTGTTAACTGCTCTACACTTCTTGGAGCAATCA TATCTTGGGGTTTCCTCTGGCCATATATATCTACAAAAGCTGGGGACTGGTATCCAGCTA ACCTAGGAAGCAATGATTTCAAAGGGCTATACGGATACAAGGTTTTTATATCTGTATCTG TGATACTTGGTGATGGTCTTTATAACCTCATCAAGATCATCTATGCTACTATCAAGGAAG TAATGAATGCACGGTCGAAGCAAGGAAGACTTCCCCTTGTGCGGGTTCATGATGATGATG AAGGCTCTAAATTATCAGCTGAAGAAAAGCTTCGGAATGACACGTTTCTAAAAGACAGAA TTCCATCATGGTTAGCAGGATCAGGTTATGTTGGCCTTGCAGCAATCTCAACAGCAACTG TGCCAATGATCTTCCCGCAGGTCAAGTGGTACCTTGTCCTGTGTGCCTATGTTGTAGCTC CCCTGCTCGCCTTCTGCAACTCATACGGCTGTGGCCTCACAGACTGGAACCTTGCGTCCA CGTATGGAAAGATTGGCCTTTTTATTTTTGCCTCCTTGGTTGGCCGAAGCGGTGGCGTGA TTGCTGGCCTAGCAGCTTGCGGTGTTATGATGTCCATCGTATCCACCGCTGCCGATCTCA TGCAGGACTTCAGGACTGGTTACCTGACCCTCTCTTCACCAAGGTCCATGTTTGTGTCAC AGTTGATTGGGACCACCCTTGGCTGCATCATCGCCCCTCTGACCTTTTGGCTCTACTGGA CTGCTTTCGATATCGGCAATCCTGATGGCATGTTCAAGGCTCCATATGCCGTCATCTACC GTGAGATGTCAATCCTGGGTGTCGAAGGATTCTCAGCGCTGCCCCAACATTGCCTGGCGA TCTGCTCGGTCTTCTTTGTCGCAGCTATTTTGATCAACCTCCTGCGGGACGTCACTCCGA AGAGCGTCTCCAAGTTCATCCCGCTCCCGATGGCTATGGCTGTCCCATTCTACATTGGGG CGTACTTTGCGATCGACATGTTCGTTGGGACGGTTATCCTGTTTGTCTGGGAGAGGGTGA ACCGCAAGGAATCTGAGGACTTTGCAGGCGCGATTGCATCTGGTTTGATCTGCGGTGATG GGATCTGGAGTGTTCCATCTGCGATATTGTCCATCATGAGGATTGACCCACCAATGTGCA TGTACTTCAAGCCATCCCTTACCAGCTGAAAATAGCGCAAAATCCGTTGTTTATTTGGAT GCCAAAATAGAAAAGAATTTTCACATGTATATATTTCTCTCTGTTGTAAATTAGACTGCG CAAAAGTGCAGTAACTTTGTTCTTTCTGTTAATATATTTCTCTGTTT