Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0390000-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:19175766:19182525:1 gene:Os04g0390000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0096P03.7 protein. (Os04t0390000-01);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-02);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-03);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-04)
Sequence	ATGGGGTGGTTTCGGGCTGCGTCCGGATTGGCTCGGGTGGCGCTGAGGAGGAACCTGGCG CGTGCTCCGGCGAACCCTTTTGCCGGTCCTGCGCCACGGTACTTCCACTCCACCCGCCCC CGGCGGTTCGCCGCTCCTGTGCCCCGCGCCGTGCCGCTCTCGCGCCTCACCGACAGCTTC CTTGATGGCACCAGCAGCGTGTACCTTGAGGAGCTCCAGAGGGCGTGGGAGGCTGATCCC ACCTCTGTCGACGAGTCCTGGGACAATTTCTTTCGGAACTTTGTCGGGCAGGCTGCAACT TCGCCTGGCATATCTGGGCAGACAATTCAGGAAAGCATGAGGTTGCTGCTTCTTGTGCGA GCGTACCAGGTGAGTGGTCACCTGAAGGCTAAGCTTGATCCTCTCGCGCTAGAGGAGCGG CCTATCCCTGATGTTCTGGACCCTGCGTTCTATGGGTTCTCTGAGGCTGATCTGGACCGG GAGTTTTTTCTTGGTGTGTGGAGGATGGCTGGGTTCTTGTCGGAGAATCGCCCTGTGCAG ACACTCCGTTCTGTGTTGGAGCGGCTTGAGCAAGCTTACTGTGGTACCATTGGGTATGAG TACATGCACATACCTGACAGGGAGAAATGTAATTGGCTGAGGGATAGGATTGAGACGGTC AATGCAAGGGAGTACTCCTACGACCGTCGCCAGGTCATGCTTGATAGGCTCATGTGGAGC ACTCAGTTTGAGAGCTTCTTGGCACAGAAATGGACGACCGCCAAGCGGTTTGGTCTTGAA GGTGCGGAGACACTGATCCCTGGCATGAAGGAGATGTTTGACAGGGCAGCTGATCTTGGT GTAGAGAGCATTGTGATTGGTATGCCACACAGAGGTAGGCTGAATGTCTTGGGAAATGTC GTGAGGAAGCCCTTGCGACAGATCTTCAGTGAGTTTAGTGGTGGTACCAAGCCTGCCGAA GAAGGGGAGGGCTTGTATACAGGGACTGGAGATGTCAAATACCATCTAGGAACTTCATAC GATAGGCCTACCAGAGGTGGAAAGCATATCCATCTGTCTCTGGTTGCAAACCCAAGTCAT TTGGAAGCAGTCGATCCTGTTGTTGCTGGGAAGACCAGAGCAAAACAGTACTATTCTAAT GATCTTGACAGGACCAAGAATTTAGGAGTCTTGTTGCATGGTGATGGAAGCTTCTCAGGG CAGGGTGTAGTGTATGAAACCCTGCATCTCAGTGCTCTTCCAAACTACACTACTGGTGGG ACAATTCACATTGTGGTCAATAATCAGGTTGCTTTCACTACTGATCCAAGGGCAGGGAGG TCTTCGCAGTATTGCACAGATGTTGCTAAAGCATTGGATGCTCCAATTTTCCATGTGAAT GGTGATGACTTGGAGGCAGTGGTTCATGTCTGTGAGCTTGCTGCGGAGTGGCGGCAAACA TTTCATTCTGATGTTGTGGTGGATATTGTATGCTACCGCCGGTTTGGGCATAACGAGATT GATGAGCCTTCCTTCACCCAGCCTAAAATGTACAAGATAATTAGGAACCACCAGAGTGCT CTTGAGATATACCAAAACAGACTTTTAGAATCTGGGAAGATATCCAAGGAAGATATTGAT AAGATGCAGAAGAAGGTCAGCACTATCTTGAATGATGAATTCCAAAACAGCAAAGAATAT ATTCCCAATAAGAGAGACTGGCTCTCAGCTTACTGGACTGGATTCAAGTCACCAGAACAG ATTTCACGAATCCGAAATACTGGTGTCAAGCCAGAGATTCTAAAACGTGTTGGAGAAGCC ATGACTACTCTGCCTGAAAATTTCAAGCCCCACAGGGCTGTCAAAAAGATTTTTGAGCTG CGTCGTCAGATGATTGAGACGGGCGAAGGCATTGATTGGGCTGTTGGTGAAGCACTTGCT TTTGCAACTCTTATAATTGAGGGAAACCATGTTAGGTTAAGTGGTCAGGATGTTGAGAGG GGTACATTCAGCCACCGCCATGCTGTTATCCATGACCAGGAAACTGGAGAGCAATACTGT CCGCTTGATAATCTTGTTATGAATCAAGATGAGGAACTATTTACTGTAAGCAACAGTTCC CTGTCAGAGTTTGCTGTTTTGGGCTTTGAATTGGGCTATTCCATGGAGAATCCAAACTCA CTGGTTTTATGGGAAGCCCAGTTTGGTGATTTTTCCAATGGAGCTCAAGTGATATTTGAT CAGTTTCTGAGTAGTGGAGAGGCAAAATGGCTCCGCCAGACCGGTCTTGTCGTTTGCCTT CCTCACGGATATGATGGTCAGGGGCCTGAACATTCCAGTGCAAGGTTGGAGCGTTTCCTT CAGATGAGTGATGACAACCCTTATGTTATTCCTGAGATGGATCCAACTCTGAGGAAGCAA ATCCAGCAGTGCAACTGGCAAGTTGTGAATGTCACAACTCCTGCAAACTATTTCCATGTC CTGCGTCGCCAGATTCACCGGGACTTCAGAAAGCCTTTGATTGTTATGTCTCCAAAGAAT CTCCTTCGACACAAGGACTGCAAATCGAATCTTTCTGAATTTGATGACCTTGCTGGTCAC CCTGGATTTGACAAGCAAGGAACCCGGTTTAAGCGTCTAATTAAAGATCAGAACAACCAT AAGGACCTTGAGGAGGGAATCAAGCGTTTAGTTCTCTGTTCTGGAAAGGTATATTATGAG TTGGACGAAGAAAGAAGAAAAAAGGAGCGTGATGATGTTGCTATATGTAGAGTTGAACAG CTCTGTCCATTCCCATATGACCTCATCCAGCGCGAGTTGAAGCGATATCCAAATGCCGAG ATTGTTTGGTGCCAAGAGGAACCCATGAACATGGGGGCGTACAGCTACATCAATCCTCGC CTCCTGACCGCGATGAGGGCGCTTGGTCGGGGCACGATAGACGACATCAAATACGTTGGA AGGGCCCCATCTGCAGCCACCGCAACAGGTTTCTACTCCGTCCATGTGCAGGAGCAAACC GAGCTTGTGCAGAAGGCACTGCAGCGAGACCCTATCAACTCTCCATTTTGA

Peptide Sequence

PEP ID	Os04t0390000-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:19175766:19182525:1 gene:Os04g0390000 transcript:Os04t0390000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0096P03.7 protein. (Os04t0390000-01);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-02);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-03);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-04)
Sequence	MGWFRAASGLARVALRRNLARAPANPFAGPAPRYFHSTRPRRFAAPVPRAVPLSRLTDSF LDGTSSVYLEELQRAWEADPTSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVR AYQVSGHLKAKLDPLALEERPIPDVLDPAFYGFSEADLDREFFLGVWRMAGFLSENRPVQ TLRSVLERLEQAYCGTIGYEYMHIPDREKCNWLRDRIETVNAREYSYDRRQVMLDRLMWS TQFESFLAQKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNV VRKPLRQIFSEFSGGTKPAEEGEGLYTGTGDVKYHLGTSYDRPTRGGKHIHLSLVANPSH LEAVDPVVAGKTRAKQYYSNDLDRTKNLGVLLHGDGSFSGQGVVYETLHLSALPNYTTGG TIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCELAAEWRQT FHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKIIRNHQSALEIYQNRLLESGKISKEDID KMQKKVSTILNDEFQNSKEYIPNKRDWLSAYWTGFKSPEQISRIRNTGVKPEILKRVGEA MTTLPENFKPHRAVKKIFELRRQMIETGEGIDWAVGEALAFATLIIEGNHVRLSGQDVER GTFSHRHAVIHDQETGEQYCPLDNLVMNQDEELFTVSNSSLSEFAVLGFELGYSMENPNS LVLWEAQFGDFSNGAQVIFDQFLSSGEAKWLRQTGLVVCLPHGYDGQGPEHSSARLERFL QMSDDNPYVIPEMDPTLRKQIQQCNWQVVNVTTPANYFHVLRRQIHRDFRKPLIVMSPKN LLRHKDCKSNLSEFDDLAGHPGFDKQGTRFKRLIKDQNNHKDLEEGIKRLVLCSGKVYYE LDEERRKKERDDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYSYINPR LLTAMRALGRGTIDDIKYVGRAPSAATATGFYSVHVQEQTELVQKALQRDPINSPF

Transcript Sequence

Transcript ID	Os04t0390000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:19175766:19182525:1 gene:Os04g0390000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0096P03.7 protein. (Os04t0390000-01);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-02);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-03);Similar to OSIGBa0096P03.7 protein. (Os04t0390000-04)
Sequence	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCAACCAATCTCCTCCCCCCTCCTTTCCTC CTCCTCCCGAACCACCGGAATCCGACGCGGCGCCGCCGCGCCACCCCGTTCCGCCGGCTC TCTTCCTCACCTCTCCTCCCCAGGAGATCGTCAATCTCCTCGGTCAGGTGTTTGATCGAT TGCCTGTGGGAAGCATATGGGCGGTTAGATTCGTGAAGTTGAGAGGAATCAGAAGACGGG AATTGTTTGAGGGGACTGAATTTGATCTGGAAAATGGGGTGGTTTCGGGCTGCGTCCGGA TTGGCTCGGGTGGCGCTGAGGAGGAACCTGGCGCGTGCTCCGGCGAACCCTTTTGCCGGT CCTGCGCCACGGTACTTCCACTCCACCCGCCCCCGGCGGTTCGCCGCTCCTGTGCCCCGC GCCGTGCCGCTCTCGCGCCTCACCGACAGCTTCCTTGATGGCACCAGCAGCGTGTACCTT GAGGAGCTCCAGAGGGCGTGGGAGGCTGATCCCACCTCTGTCGACGAGTCCTGGGACAAT TTCTTTCGGAACTTTGTCGGGCAGGCTGCAACTTCGCCTGGCATATCTGGGCAGACAATT CAGGAAAGCATGAGGTTGCTGCTTCTTGTGCGAGCGTACCAGGTGAGTGGTCACCTGAAG GCTAAGCTTGATCCTCTCGCGCTAGAGGAGCGGCCTATCCCTGATGTTCTGGACCCTGCG TTCTATGGGTTCTCTGAGGCTGATCTGGACCGGGAGTTTTTTCTTGGTGTGTGGAGGATG GCTGGGTTCTTGTCGGAGAATCGCCCTGTGCAGACACTCCGTTCTGTGTTGGAGCGGCTT GAGCAAGCTTACTGTGGTACCATTGGGTATGAGTACATGCACATACCTGACAGGGAGAAA TGTAATTGGCTGAGGGATAGGATTGAGACGGTCAATGCAAGGGAGTACTCCTACGACCGT CGCCAGGTCATGCTTGATAGGCTCATGTGGAGCACTCAGTTTGAGAGCTTCTTGGCACAG AAATGGACGACCGCCAAGCGGTTTGGTCTTGAAGGTGCGGAGACACTGATCCCTGGCATG AAGGAGATGTTTGACAGGGCAGCTGATCTTGGTGTAGAGAGCATTGTGATTGGTATGCCA CACAGAGGTAGGCTGAATGTCTTGGGAAATGTCGTGAGGAAGCCCTTGCGACAGATCTTC AGTGAGTTTAGTGGTGGTACCAAGCCTGCCGAAGAAGGGGAGGGCTTGTATACAGGGACT GGAGATGTCAAATACCATCTAGGAACTTCATACGATAGGCCTACCAGAGGTGGAAAGCAT ATCCATCTGTCTCTGGTTGCAAACCCAAGTCATTTGGAAGCAGTCGATCCTGTTGTTGCT GGGAAGACCAGAGCAAAACAGTACTATTCTAATGATCTTGACAGGACCAAGAATTTAGGA GTCTTGTTGCATGGTGATGGAAGCTTCTCAGGGCAGGGTGTAGTGTATGAAACCCTGCAT CTCAGTGCTCTTCCAAACTACACTACTGGTGGGACAATTCACATTGTGGTCAATAATCAG GTTGCTTTCACTACTGATCCAAGGGCAGGGAGGTCTTCGCAGTATTGCACAGATGTTGCT AAAGCATTGGATGCTCCAATTTTCCATGTGAATGGTGATGACTTGGAGGCAGTGGTTCAT GTCTGTGAGCTTGCTGCGGAGTGGCGGCAAACATTTCATTCTGATGTTGTGGTGGATATT GTATGCTACCGCCGGTTTGGGCATAACGAGATTGATGAGCCTTCCTTCACCCAGCCTAAA ATGTACAAGATAATTAGGAACCACCAGAGTGCTCTTGAGATATACCAAAACAGACTTTTA GAATCTGGGAAGATATCCAAGGAAGATATTGATAAGATGCAGAAGAAGGTCAGCACTATC TTGAATGATGAATTCCAAAACAGCAAAGAATATATTCCCAATAAGAGAGACTGGCTCTCA GCTTACTGGACTGGATTCAAGTCACCAGAACAGATTTCACGAATCCGAAATACTGGTGTC AAGCCAGAGATTCTAAAACGTGTTGGAGAAGCCATGACTACTCTGCCTGAAAATTTCAAG CCCCACAGGGCTGTCAAAAAGATTTTTGAGCTGCGTCGTCAGATGATTGAGACGGGCGAA GGCATTGATTGGGCTGTTGGTGAAGCACTTGCTTTTGCAACTCTTATAATTGAGGGAAAC CATGTTAGGTTAAGTGGTCAGGATGTTGAGAGGGGTACATTCAGCCACCGCCATGCTGTT ATCCATGACCAGGAAACTGGAGAGCAATACTGTCCGCTTGATAATCTTGTTATGAATCAA GATGAGGAACTATTTACTGTAAGCAACAGTTCCCTGTCAGAGTTTGCTGTTTTGGGCTTT GAATTGGGCTATTCCATGGAGAATCCAAACTCACTGGTTTTATGGGAAGCCCAGTTTGGT GATTTTTCCAATGGAGCTCAAGTGATATTTGATCAGTTTCTGAGTAGTGGAGAGGCAAAA TGGCTCCGCCAGACCGGTCTTGTCGTTTGCCTTCCTCACGGATATGATGGTCAGGGGCCT GAACATTCCAGTGCAAGGTTGGAGCGTTTCCTTCAGATGAGTGATGACAACCCTTATGTT ATTCCTGAGATGGATCCAACTCTGAGGAAGCAAATCCAGCAGTGCAACTGGCAAGTTGTG AATGTCACAACTCCTGCAAACTATTTCCATGTCCTGCGTCGCCAGATTCACCGGGACTTC AGAAAGCCTTTGATTGTTATGTCTCCAAAGAATCTCCTTCGACACAAGGACTGCAAATCG AATCTTTCTGAATTTGATGACCTTGCTGGTCACCCTGGATTTGACAAGCAAGGAACCCGG TTTAAGCGTCTAATTAAAGATCAGAACAACCATAAGGACCTTGAGGAGGGAATCAAGCGT TTAGTTCTCTGTTCTGGAAAGGTATATTATGAGTTGGACGAAGAAAGAAGAAAAAAGGAG CGTGATGATGTTGCTATATGTAGAGTTGAACAGCTCTGTCCATTCCCATATGACCTCATC CAGCGCGAGTTGAAGCGATATCCAAATGCCGAGATTGTTTGGTGCCAAGAGGAACCCATG AACATGGGGGCGTACAGCTACATCAATCCTCGCCTCCTGACCGCGATGAGGGCGCTTGGT CGGGGCACGATAGACGACATCAAATACGTTGGAAGGGCCCCATCTGCAGCCACCGCAACA GGTTTCTACTCCGTCCATGTGCAGGAGCAAACCGAGCTTGTGCAGAAGGCACTGCAGCGA GACCCTATCAACTCTCCATTTTGAACCTGTAGATTTTATTTGGATAGCCGTGGGTAATCA AACCTTTGATCCAACAGCAAAATTATTGCCTGTGCAGCCATTTGGTGAATAATCCGCTTC GGATGTTTGGTACCGCATGAGAGAAACCATTTGAAACCCATGTTGGGATGCATCATTTTG TGTTTCTTAACATCAAATTAAACCAAGTTGCATCCAATGCTTACTTGAGGAGTAGAAATA AGTCGATGCTGAATACTGATCTTCCATGTTTTTGTGATACTACATTCTTATTACTGCGCC TTTCACCATCC