Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0389800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:19169130:19171314:1 gene:Os04g0389800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALS2 description:Similar to OSIGBa0096P03.6 protein. (Os04t0389800-01)
Sequence	ATGGCTGCCGCCGCCGCCGCCGCCTCACTCTCCGTCTCCGACGCCGCCGCTAAGCTGCCC AAACCGGGAGGGCAAGTGCAACGGCGACGCGACAGGGATCGTCCACGCGTGGATGCTGCC GCCTGCACCCGCGACAGCCGCCGTCCCACGCGCGAGAGGTGCTCGACGACGGTGTCCCTC GCCGCGACCGCGACCGCGACAACGGCCACGCCCGTGCGCGCGCCGGTCCGGACGCGGGCG CCCATGGGGCAGCGGAAGGGCGCGGACATCGTCGTCGAGGCGCTGGAGCGGTGCGGCGTC CGCGACGTGTTCGAGTACCCGGGCGGCGCGTCAATGGAGATCCACCAGGCGCTGACGCGG TCGCCGGTGATCCGCAACCACCTGCTCCGCCACGAGCAGGGGGAGGCCTTCGCGGCGTCC GGGTACGCGCGCTCGTCGGGGCGGCCGGGCGTCTGCGTCGCCACCTCCGGCCCGGGCGCC ACCAACCTCGTGTCCGCGCTCGCCGACGCCCACCTCGACTCCGTCCCGCTCGTCGCCATC ACGGGGCAGGCCCCGCGCCGCATGATCGGCACCGACGCGTTCCAGGAGACGCCCATCGTC GAGTTCACCCGCTCCATCACCAAGCACAACTACCTAATCCTCGACGTCGACGACATCCCC CGCGTCATCAACGAGGCCTTCTTCCTCGCGTCCACGGGTCGCCCCGGCCCGGTGCTCGTC GACATCCCCAAGGACATCCAGCAGCAGATGGCCGTGCCGTCCTGGGACGCGCCGATGCGC CTCCCGGGGTACATCTCCCGGCTGCCGAAGCCGCCGGCCGCCAACCTGCTCGACGAAGTC ATCCGCCTCGTCGGCGACGCCGAGAGGCCCGTCCTCTACGTCGGCGGCGGGTGCTCCGCG TCGGGCTACGAGCTGCGGCGCTTCGTGGAGCTGACGGGCATCCCGGTGACGACCACCCTC ATGGGCATCGGGAACTTCCCCAGCGACGACCCGCTCTCGCTGCGGATGCTCGGGATGCAT GGCACTGTGTACGCCAACTACGCCGTCGACAACGCCGACCTCCTCCTCGCGCTCGGCGTG CGCTTCGACGACCGCGTCACCGGCAAAGTCGAGGCGTTCGCGAGCAGGGCCAAGATCGTG CACGTCGACATCGACCCGTCGGAGCTCGGGAAGAACAAGCAGCCGCACGTCTCCATCTGC GCCGACGTCAAGCTCGCCCTGCAGGGCATGAACGCGATGCTGGAAGAACAGAGCGCCGCC GCCGCGCGCAAGAACCTCGATTTCAGCGCGTGGCGCTCGGAGCTGGAGAAGAAGAAGGTC GAGTTCCCACTGGGCTACAGAACGTTCGGCGAGGAGATCCCGCCGCAGTACGCCATCCAG GTGCTCGACGAGGTCACCAACGGGGAGGCCATCGTCGCCACGGGCGTCGGGCAGCACCAG ATGTGGGCGACGCAGCACTACACCTACAGGAGGCCCAGGCAGTGGCTCTCGTCCGCCGGG CTGGGCGCCATGGGCTTCGGCCTGCCTGCCGCCGCCGGCGCCGCGGTGGCCAACCCGGGC GCCACCGTGGTCGACATCGACGGCGACGGCAGCCTCCTGATGAACATCCAGGAGCTCGCC ATGGTCCGCGTCGAGGACCTGCCGGTGAAGGTGATGGTGCTGAACAACCAGCACCTGGGC ATGGTGGTGCAGTGGGAGGACAGGTTCTACGACGCCAACAGGGCGCACACCTACCTCGGC AACCCGGCGGCGAACGGCGGCGGCGAGGTGTACCCGGACTTCGTGACGATCGCCGGAGGC TTCGGCATCCCGGCGGCCCGCGTGACGAGGAAGGGCGAGGTCCGCGCCGCCGTCGAGGAG ATGATGGCGGCGCCGGGGCCGTACCTGCTGGACGTCGTCGTGCCTCACCAGGAGCACGTG CTGCCGATGATCCCCAGCAATGGCGCTTTCAAGGACATTATCGTCGACGGTGATGGCCGG AGTTCGTATTAG

Peptide Sequence

PEP ID	Os04t0389800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:19169130:19171314:1 gene:Os04g0389800 transcript:Os04t0389800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALS2 description:Similar to OSIGBa0096P03.6 protein. (Os04t0389800-01)
Sequence	MAAAAAAASLSVSDAAAKLPKPGGQVQRRRDRDRPRVDAAACTRDSRRPTRERCSTTVSL AATATATTATPVRAPVRTRAPMGQRKGADIVVEALERCGVRDVFEYPGGASMEIHQALTR SPVIRNHLLRHEQGEAFAASGYARSSGRPGVCVATSGPGATNLVSALADAHLDSVPLVAI TGQAPRRMIGTDAFQETPIVEFTRSITKHNYLILDVDDIPRVINEAFFLASTGRPGPVLV DIPKDIQQQMAVPSWDAPMRLPGYISRLPKPPAANLLDEVIRLVGDAERPVLYVGGGCSA SGYELRRFVELTGIPVTTTLMGIGNFPSDDPLSLRMLGMHGTVYANYAVDNADLLLALGV RFDDRVTGKVEAFASRAKIVHVDIDPSELGKNKQPHVSICADVKLALQGMNAMLEEQSAA AARKNLDFSAWRSELEKKKVEFPLGYRTFGEEIPPQYAIQVLDEVTNGEAIVATGVGQHQ MWATQHYTYRRPRQWLSSAGLGAMGFGLPAAAGAAVANPGATVVDIDGDGSLLMNIQELA MVRVEDLPVKVMVLNNQHLGMVVQWEDRFYDANRAHTYLGNPAANGGGEVYPDFVTIAGG FGIPAARVTRKGEVRAAVEEMMAAPGPYLLDVVVPHQEHVLPMIPSNGAFKDIIVDGDGR SSY

Transcript Sequence

Transcript ID	Os04t0389800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:19169130:19171314:1 gene:Os04g0389800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALS2 description:Similar to OSIGBa0096P03.6 protein. (Os04t0389800-01)
Sequence	GTGCCTCCAACCTCGCGGCACACGTGACACAGACGCTCGCCGCCGACACGGTGACGTCGC CATGGCTGCCGCCGCCGCCGCCGCCTCACTCTCCGTCTCCGACGCCGCCGCTAAGCTGCC CAAACCGGGAGGGCAAGTGCAACGGCGACGCGACAGGGATCGTCCACGCGTGGATGCTGC CGCCTGCACCCGCGACAGCCGCCGTCCCACGCGCGAGAGGTGCTCGACGACGGTGTCCCT CGCCGCGACCGCGACCGCGACAACGGCCACGCCCGTGCGCGCGCCGGTCCGGACGCGGGC GCCCATGGGGCAGCGGAAGGGCGCGGACATCGTCGTCGAGGCGCTGGAGCGGTGCGGCGT CCGCGACGTGTTCGAGTACCCGGGCGGCGCGTCAATGGAGATCCACCAGGCGCTGACGCG GTCGCCGGTGATCCGCAACCACCTGCTCCGCCACGAGCAGGGGGAGGCCTTCGCGGCGTC CGGGTACGCGCGCTCGTCGGGGCGGCCGGGCGTCTGCGTCGCCACCTCCGGCCCGGGCGC CACCAACCTCGTGTCCGCGCTCGCCGACGCCCACCTCGACTCCGTCCCGCTCGTCGCCAT CACGGGGCAGGCCCCGCGCCGCATGATCGGCACCGACGCGTTCCAGGAGACGCCCATCGT CGAGTTCACCCGCTCCATCACCAAGCACAACTACCTAATCCTCGACGTCGACGACATCCC CCGCGTCATCAACGAGGCCTTCTTCCTCGCGTCCACGGGTCGCCCCGGCCCGGTGCTCGT CGACATCCCCAAGGACATCCAGCAGCAGATGGCCGTGCCGTCCTGGGACGCGCCGATGCG CCTCCCGGGGTACATCTCCCGGCTGCCGAAGCCGCCGGCCGCCAACCTGCTCGACGAAGT CATCCGCCTCGTCGGCGACGCCGAGAGGCCCGTCCTCTACGTCGGCGGCGGGTGCTCCGC GTCGGGCTACGAGCTGCGGCGCTTCGTGGAGCTGACGGGCATCCCGGTGACGACCACCCT CATGGGCATCGGGAACTTCCCCAGCGACGACCCGCTCTCGCTGCGGATGCTCGGGATGCA TGGCACTGTGTACGCCAACTACGCCGTCGACAACGCCGACCTCCTCCTCGCGCTCGGCGT GCGCTTCGACGACCGCGTCACCGGCAAAGTCGAGGCGTTCGCGAGCAGGGCCAAGATCGT GCACGTCGACATCGACCCGTCGGAGCTCGGGAAGAACAAGCAGCCGCACGTCTCCATCTG CGCCGACGTCAAGCTCGCCCTGCAGGGCATGAACGCGATGCTGGAAGAACAGAGCGCCGC CGCCGCGCGCAAGAACCTCGATTTCAGCGCGTGGCGCTCGGAGCTGGAGAAGAAGAAGGT CGAGTTCCCACTGGGCTACAGAACGTTCGGCGAGGAGATCCCGCCGCAGTACGCCATCCA GGTGCTCGACGAGGTCACCAACGGGGAGGCCATCGTCGCCACGGGCGTCGGGCAGCACCA GATGTGGGCGACGCAGCACTACACCTACAGGAGGCCCAGGCAGTGGCTCTCGTCCGCCGG GCTGGGCGCCATGGGCTTCGGCCTGCCTGCCGCCGCCGGCGCCGCGGTGGCCAACCCGGG CGCCACCGTGGTCGACATCGACGGCGACGGCAGCCTCCTGATGAACATCCAGGAGCTCGC CATGGTCCGCGTCGAGGACCTGCCGGTGAAGGTGATGGTGCTGAACAACCAGCACCTGGG CATGGTGGTGCAGTGGGAGGACAGGTTCTACGACGCCAACAGGGCGCACACCTACCTCGG CAACCCGGCGGCGAACGGCGGCGGCGAGGTGTACCCGGACTTCGTGACGATCGCCGGAGG CTTCGGCATCCCGGCGGCCCGCGTGACGAGGAAGGGCGAGGTCCGCGCCGCCGTCGAGGA GATGATGGCGGCGCCGGGGCCGTACCTGCTGGACGTCGTCGTGCCTCACCAGGAGCACGT GCTGCCGATGATCCCCAGCAATGGCGCTTTCAAGGACATTATCGTCGACGGTGATGGCCG GAGTTCGTATTAGTTCTGAACTTCTAATATATGGGACTATCCGTACATTTATCGTCTAAA AATGTGTTATCTATAAATATAGTACCATAGTAATGTAATTACATTGTAACTATATATAAT TGTTCTATAACTTTCGTTAGTTTTG