Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0388800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:19130571:19132906:1 gene:Os04g0388800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C44 description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os04t0388800-01)
Sequence	GTCAATGTAACCAATGGCATGTATACTTATGATAAGAAGGCAAACAAGAGAGCTCGAAAG AATGCGGCTGCTGCAGCAGCGGCAGCAGCAGCTGCAGCCGCCGCTGCTGAGGCTACTACA CGTCCTGCGGGGGTTGATACTTTCTGGACGTCCTGCAATCGCTGCCGGATGCAGTATGAG TACTTGAGAATTTATCTTAACCATAATCTTCTGTGTCCAAACTGCCATCATGCATTCTTG GCAGTAGAGACTGGATTTCCTTGCAACGGGAGCAGTTCTTCATTCTCATGGTCAACCAAA CAGCAGCCGCAGAATAACAATTCCACCAAGCATTCATATGGCTCGACAAGCAGGACTTCT AGCATTCCGGGGACAGGGCATGGGGGTTACCAGCAAGATGGTACTTATGATTCCTACAAC AACCAAAGCTTCCAATGGAATCAGTACTCCAAGACAACACCTGCAGCTGGTACAAATGCA TACGGTACCCAGGCCTTGGAGAAACCGAAAAGGAAACATGAAGAGAGCTACAGTTACAAC TATTCTGCTACTGGCAATTCATATGGCCATGAGAGAACTAATTCAAGGCGTGGCCGGTTT TCAAAGAGGAGAAGGCATAGTAATGATGGTTACACTACTATGGATTTTGGTGGAGATAAC AGAGAAACTGTAGCTGCCAGCACAGAAACAACTGCTTTCACTGACGTGGCAGTGGCACAA GTCAATGGCACTTCAGGGGAAAAGTTGAGATCTGCAGTGAGTGGAAGAAGAGCAAACGTT TTGAGAGAGATTTCTCAGATTGATACACGGGCTCTACTTATTGAGAAAGCCAAGGCTGCC ATCCAGGAAAAATTACAGGAGTGGAACATCACCTCATCGTCACGGCTTGCAGAGAGAGGA AAATCGCAAGGAAAGGTATATCCCAGTGATAACAACATAAAGCAGAATGGGGGCCTCTCT GACAAACATGTCAAAGGGCTCAAGCAATGCAGCTCAAGAAGTGTTGATACCCAAGCACCT ACGGTTGATGAAAAGAACCCGGAACAGAGGCGTGTTCCGGTGTCAATTGATGTCCCAGAT CCTGACTTTCATGATTTTGACAAGGATCGCACAGAGCGTGCTTTTGATAGTGATCAAGTA TGGGCTACATATGATAGTGAGGATGGTATGCCTCGTCTGTATGCAATGGTTCAGAAAGTT CTTTCAATGAGACCTTTCAGAATCCGCATGAGTTTCCTCAACTCCAAGTCCAACAGTGAA CTGGCACCAATAAGCTGGGTTGCCTCTGGTTTTCAGAAGACATGTGGTGATTTCAGGGTT GGGAGATACCAGATTTCTGAAACAGTCAACATATTTTCGCACAAAGTCAGCTGGACTAAA GGCCCCCGTGGGATTATCAGGATCGTTCCTCAGAAAGGTGATACATGGGCTTTATACCGA AACTGGTCTCCTGACTGGAATGAGTTAACACCTGATGATGTGATATACAAGTATGAGATA GTAGAAATTATTGATGATTTCACTGATGAGCAAGGGCTGACAGTCATCCCATTGCTGAAG GTTGCTGGTTTCAAAGCTGTGTTCCATAGGCATATGGATCCGAAAGAGGCCAGGAGGATA CCAAAGGAAGAGCTTTTCCGATTCTCACATCGGGTTCCTTCTCGCCTGCTGACTGGGGAA GAAGGCAACAATGCCCCAAAAGGTTGCCACGAGCTGGACCCTGCAGCAACTCCAGTGGAC CTTCTTAAGGTCATTACAGAAGTTACGGAAGATACAGCAACACAACCTGCTAAGTAG

Peptide Sequence

PEP ID	Os04t0388800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:19130571:19132906:1 gene:Os04g0388800 transcript:Os04t0388800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C44 description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os04t0388800-01)
Sequence	VNVTNGMYTYDKKANKRARKNAAAAAAAAAAAAAAAEATTRPAGVDTFWTSCNRCRMQYE YLRIYLNHNLLCPNCHHAFLAVETGFPCNGSSSSFSWSTKQQPQNNNSTKHSYGSTSRTS SIPGTGHGGYQQDGTYDSYNNQSFQWNQYSKTTPAAGTNAYGTQALEKPKRKHEESYSYN YSATGNSYGHERTNSRRGRFSKRRRHSNDGYTTMDFGGDNRETVAASTETTAFTDVAVAQ VNGTSGEKLRSAVSGRRANVLREISQIDTRALLIEKAKAAIQEKLQEWNITSSSRLAERG KSQGKVYPSDNNIKQNGGLSDKHVKGLKQCSSRSVDTQAPTVDEKNPEQRRVPVSIDVPD PDFHDFDKDRTERAFDSDQVWATYDSEDGMPRLYAMVQKVLSMRPFRIRMSFLNSKSNSE LAPISWVASGFQKTCGDFRVGRYQISETVNIFSHKVSWTKGPRGIIRIVPQKGDTWALYR NWSPDWNELTPDDVIYKYEIVEIIDDFTDEQGLTVIPLLKVAGFKAVFHRHMDPKEARRI PKEELFRFSHRVPSRLLTGEEGNNAPKGCHELDPAATPVDLLKVITEVTEDTATQPAK

Transcript Sequence

Transcript ID	Os04t0388800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:19130571:19132906:1 gene:Os04g0388800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C44 description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os04t0388800-01)
Sequence	TGTCAATGTAACCAATGGCATGTATACTTATGATAAGAAGGCAAACAAGAGAGCTCGAAA GAATGCGGCTGCTGCAGCAGCGGCAGCAGCAGCTGCAGCCGCCGCTGCTGAGGCTACTAC ACGTCCTGCGGGGGTTGATACTTTCTGGACGTCCTGCAATCGCTGCCGGATGCAGTATGA GTACTTGAGAATTTATCTTAACCATAATCTTCTGTGTCCAAACTGCCATCATGCATTCTT GGCAGTAGAGACTGGATTTCCTTGCAACGGGAGCAGTTCTTCATTCTCATGGTCAACCAA ACAGCAGCCGCAGAATAACAATTCCACCAAGCATTCATATGGCTCGACAAGCAGGACTTC TAGCATTCCGGGGACAGGGCATGGGGGTTACCAGCAAGATGGTACTTATGATTCCTACAA CAACCAAAGCTTCCAATGGAATCAGTACTCCAAGACAACACCTGCAGCTGGTACAAATGC ATACGGTACCCAGGCCTTGGAGAAACCGAAAAGGAAACATGAAGAGAGCTACAGTTACAA CTATTCTGCTACTGGCAATTCATATGGCCATGAGAGAACTAATTCAAGGCGTGGCCGGTT TTCAAAGAGGAGAAGGCATAGTAATGATGGTTACACTACTATGGATTTTGGTGGAGATAA CAGAGAAACTGTAGCTGCCAGCACAGAAACAACTGCTTTCACTGACGTGGCAGTGGCACA AGTCAATGGCACTTCAGGGGAAAAGTTGAGATCTGCAGTGAGTGGAAGAAGAGCAAACGT TTTGAGAGAGATTTCTCAGATTGATACACGGGCTCTACTTATTGAGAAAGCCAAGGCTGC CATCCAGGAAAAATTACAGGAGTGGAACATCACCTCATCGTCACGGCTTGCAGAGAGAGG AAAATCGCAAGGAAAGGTATATCCCAGTGATAACAACATAAAGCAGAATGGGGGCCTCTC TGACAAACATGTCAAAGGGCTCAAGCAATGCAGCTCAAGAAGTGTTGATACCCAAGCACC TACGGTTGATGAAAAGAACCCGGAACAGAGGCGTGTTCCGGTGTCAATTGATGTCCCAGA TCCTGACTTTCATGATTTTGACAAGGATCGCACAGAGCGTGCTTTTGATAGTGATCAAGT ATGGGCTACATATGATAGTGAGGATGGTATGCCTCGTCTGTATGCAATGGTTCAGAAAGT TCTTTCAATGAGACCTTTCAGAATCCGCATGAGTTTCCTCAACTCCAAGTCCAACAGTGA ACTGGCACCAATAAGCTGGGTTGCCTCTGGTTTTCAGAAGACATGTGGTGATTTCAGGGT TGGGAGATACCAGATTTCTGAAACAGTCAACATATTTTCGCACAAAGTCAGCTGGACTAA AGGCCCCCGTGGGATTATCAGGATCGTTCCTCAGAAAGGTGATACATGGGCTTTATACCG AAACTGGTCTCCTGACTGGAATGAGTTAACACCTGATGATGTGATATACAAGTATGAGAT AGTAGAAATTATTGATGATTTCACTGATGAGCAAGGGCTGACAGTCATCCCATTGCTGAA GGTTGCTGGTTTCAAAGCTGTGTTCCATAGGCATATGGATCCGAAAGAGGCCAGGAGGAT ACCAAAGGAAGAGCTTTTCCGATTCTCACATCGGGTTCCTTCTCGCCTGCTGACTGGGGA AGAAGGCAACAATGCCCCAAAAGGTTGCCACGAGCTGGACCCTGCAGCAACTCCAGTGGA CCTTCTTAAGGTCATTACAGAAGTTACGGAAGATACAGCAACACAACCTGCTAAGTAGAA GAGGGCAACTATGAACACTGAAGATAGCTTGGATGTCTCAACTGTCAAATGCACTTCACT GAACTCAACATTTGTTGGTCACTTAAGTTCTAGTATGTCATCTTATTTTTGGCTGATGAC TTGGACAACTCTACCAGGGCAAGCAGCTTATGTCGCAGAATTCTGACATAATTCTTAGGC ATTTTCTAACATTTTGGTTTTACTGCAATACGGATATCTTCCTGAGAGTAAAAGACTATT TGGAGGCCAGTTTTGGCAATTGACGAGGCGACCAAGTGGTGCTTGCTGAGGCTATTAGTC AACGGAAGCTAAGAAGCCTCATGAATCGCTGAAGGTGCTACTTGTTTGTCACTCTTTAAG GTACGGCGCTCTGCATCCACAGCTGAATTTGAGGGGAGAACCACTAGGCTTCCCCATGTA CCCGAGTTTGTGTACTGGTTTACTTATTAAGATGTTGTACTTCCTTTAATCTATAGTAAT TCATCCCTATAATGTTGAACGTGATGATTCGAAATTCTAGTTAAATTCTGAGGACC