Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0382400-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:18757823:18758848:-1 gene:Os04g0382400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0092E09.7 protein. (Os04t0382400-01)
Sequence

ATGAGGAGCAAGGCGTCCATGTTCTTGAAGCAGATGGTGTCGACGATCGTGGCGGTGGTG
AAGGCGAAGTCGACGGCGGTGAGGGCCAAGACGAGCGCCATGAAGACGCGGCTGCTCATC
TTCGGCGTCCTCCGCAACCGGAAGCTCCTCGCCACCGCCATCAACCACAAGATCCACGCC
ATCATGGGCGGCGCCGCCGCCCAGGACACCACCAACGACGGTGGCGTCGCCGGAGTGGAG
GACGACGACGGCGGCGGCAGCAAGAAGGCCGTGGTGCTGTACAACACCGCGCCGAGCTTC
CTCACGGAGCGCGGCTACTACGATCACGCCGGCGAGGAGGAAGAGGAGGAGGAGGACAGC
GACGAGTACCTGACGCACTCGTTGTTCCAGGAGGAAGACGACGAGGACGACGAGCTGGTG
AACGCGCCGGGGTCGGTGATCGACCTGGTGCGCGACGCCAAGGAAGGGGAAGGCGGCGAG
TTCCGGCTGGAGGACGAGATCGACCACGTCGCCGACGTGTTCATCCGCCGCATCCACAAG
CAGCTCAAGCTCCAGAAGCTCGACTCCTTCAAGAGGTTCTGCGAGATGCTCGAGAGGAGC
GCCTAA

Peptide Sequence

PEP ID

Os04t0382400-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:18757823:18758848:-1 gene:Os04g0382400 transcript:Os04t0382400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0092E09.7 protein. (Os04t0382400-01)
Sequence

MRSKASMFLKQMVSTIVAVVKAKSTAVRAKTSAMKTRLLIFGVLRNRKLLATAINHKIHA
IMGGAAAQDTTNDGGVAGVEDDDGGGSKKAVVLYNTAPSFLTERGYYDHAGEEEEEEEDS
DEYLTHSLFQEEDDEDDELVNAPGSVIDLVRDAKEGEGGEFRLEDEIDHVADVFIRRIHK
QLKLQKLDSFKRFCEMLERSA

Transcript Sequence

Transcript ID

Os04t0382400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:18757823:18758848:-1 gene:Os04g0382400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0092E09.7 protein. (Os04t0382400-01)
Sequence

ATGTCCAACCATCCAATTCCAAGCACTACTACTCATCACTAGCTCACACACAATTGCATA
CACCTAGCTCAAAAGCCTTTCTATTTCACTAATTGTGTGTGTTCATTGCTAGTTGCATTG
TGGTTTTCTAGTTAATTAACAAGCTAGCTATACCTAGCTTATAATTAGCTAGAGTGTGAG
CTTATAATTAGTTAGTTAGTTGAAAACAAGCTAAGATGAGGAGCAAGGCGTCCATGTTCT
TGAAGCAGATGGTGTCGACGATCGTGGCGGTGGTGAAGGCGAAGTCGACGGCGGTGAGGG
CCAAGACGAGCGCCATGAAGACGCGGCTGCTCATCTTCGGCGTCCTCCGCAACCGGAAGC
TCCTCGCCACCGCCATCAACCACAAGATCCACGCCATCATGGGCGGCGCCGCCGCCCAGG
ACACCACCAACGACGGTGGCGTCGCCGGAGTGGAGGACGACGACGGCGGCGGCAGCAAGA
AGGCCGTGGTGCTGTACAACACCGCGCCGAGCTTCCTCACGGAGCGCGGCTACTACGATC
ACGCCGGCGAGGAGGAAGAGGAGGAGGAGGACAGCGACGAGTACCTGACGCACTCGTTGT
TCCAGGAGGAAGACGACGAGGACGACGAGCTGGTGAACGCGCCGGGGTCGGTGATCGACC
TGGTGCGCGACGCCAAGGAAGGGGAAGGCGGCGAGTTCCGGCTGGAGGACGAGATCGACC
ACGTCGCCGACGTGTTCATCCGCCGCATCCACAAGCAGCTCAAGCTCCAGAAGCTCGACT
CCTTCAAGAGGTTCTGCGAGATGCTCGAGAGGAGCGCCTAAGTTCATACCCAGATCGCCA
AACTTTTTGGCTCACTGTGCATGGTGAAGAAAAAAAAACCTTTTTTTTACCGTTAAGCCA
AGGTTAATTAATTGATTAATTACACACACAACTTGGTGACTTTTGATCCATGCACGCATG
TAAGTAGAGAGAATAAAGTGACAAAGATATATACTTCTCTTGTAGAAGGGGTTCACTACT
TTACTT