Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0382200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:18740622:18743199:1 gene:Os04g0382200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EXOCYST SUBUNIT EXO70 FAMILY PROTEIN F3 description:Component of Exo70 exocyst complex, Response to the fungal effector, AVR-Pii, Pii-dependent resistance (Os04t0382200-01)
Sequence	ATGTCGGCGCCGCCCGCGCCGCCCCATCCCCAGCCGGAGGAGCTGGAGGTGGCGGAGGAA CCCCCCGCCGCGGCGGGAGGAGTGGGGAACGACAAGGTGCTCGCGGCGGCGCAGCACATC GTGAAGTCGCTGGCCACGTCGAAGAACGCCGCGGACGACATGATCCGCATCCTCTCCGGC TTCGACCACCGCTTCTCCTCCATCACCGCCGACCTCTTCCCCTCGCCCTTGCCGTCGTCG GGCGCCGGGCCCACCCCGCCTCCGCCTCCGCCGCCGCGGGGGGCGTTCGAGGCCGCGGAG AGGCTCATCCGGCAGTGGGACGCGACCTCGGAGCTGCTGGTGTTCGAGGGCCCCGAGGGG GACGTCGCCGACTACCTCGAGGCGGTCGACGTCGCCGTCGACCAGCTGCTCTCCGGGGTG GGGGCCGCCGCCGCCGACGCCGAGGCCGAGGCGGCGGGCGTCGTGGTGCAGCTCGCGATG GCGCGGATGGAGGAGGAGCTCCGCCACCTCATGGTCCGCCACGCGGTGCCGCTGGACGCG AGCGGGCTCTTCTGCTCGCTGCGCCGCCTCTCCCTCGAGTCCATGGACGACCTCGACACC TCCTCCGAGTTCGATCCCATCACCCCGCACAGCCTGGAGGGCGGCCCGGACACCGCTCGC AGCGCCAGCCTCGTGGGGAACCCCTTCGACGACCAGGTGTTCGACCTGGTGCGCCCTGAG GCCATTGACGATCTGCGCTCCATCGCTCAAAGGATGGACCGCGCGGGGTATGCCAGTGAG CTCGAGCAGGTCTACTGTGGCGTCCGACGTGACCTGCTCGACGAGTGCCTCGCGGTGCTC GGGGTCGAACGCCTCAGCATCGATGAAGTGCAGCGCATGGAGTGGAAGCTTCTGAATGAC AAGATGAAGAAATGGGTGCATGGGGTCAAGACGGTCGTGCGTTCCCTGCTGACCGGTGAG CGCCGGATCTGTGATCAGGTGCTCGCCGTGTCTGATGAGCTGCGTGATGAGTGTTTTGTT GAATCTACCAAGGGTTGCATAATGCAGATTCTTAACTTTGGTGATGCTGTGGCGGTGTGC TCTCGCTCGCCGGAGAAGCTCTCCCGGATTCTTGACATGTATGAGGCACTTGCTGAGGTG ATCCCTGAACTGAAGGAGCTGTTCTTTGGGAATTCTGGGAATGATGTAATCTGTGATTTG GAGGGGGTTCTTGAAAGGCTTGGGGACGCAGTGAAGGGCACACTTCTCGAGTTTGGGAAA GTTCTTCAGCAGGAGTCATCACGGCGGCCTATGATGGCTGGTGAGATCCACCCAATGACA CGTTACGTGATGAACTATCTTCGGTTGTTGGTTGTTTACAGTGATACGCTTGACAAACTC TTGGGTGACGATTCTGCTGGAGATGTTGATCATAGTGATACGCATAGAGGTGGTGATGAT GAGGAGGAGTATTTGGAGAGCTTGTCCCCACTTGGACGACATTTAGTGAAGCTGATATCT TATCTGGAGGCAAATTTGGAGGAAAAATCAAAACTGTACGAGGATGGTGCACTGCAATGC ATATTTTCCATGAATAATATACTCTATATTGTCCAAAAGGTGAAGGACTCTGAACTTGGG AGGATTTTAGGTGATCACTGGATACGGAGGCGCCGTGGGAAGATTCGGCAAAATTCAAAG AACTACCTTAGGATATCATGGACTAAGGTTTTGTCTTTTCTCAAGGATGATGCACACGGC GGCAGAAGCGGAAGTGGAAGTGGTAGTGGGAATAGCTCTAGGATCAAGGAGAAATTCAAG AACTTCAACTTGGCCTTTGATGAGATATACAGGAGTCAAACGCTCTGGAAGGTACCAGAT CCTCAGCTTCGTGAAGAGCTCAAGATATCTATCTCTGAAAATGTGATACCAGCATACCGT GCTTTTCTGGGAAGATATGGTAGTCTAGTGGATAGCGGAAGGAATTCAGGTAGATACATC AAATACACCCCAGAGGACTTGGAGAATCAGCTGTCTGATCTATTTGAAGGTTCACTAGGG CCTGCCAACCATTCTAGGAGAAGATAG

Peptide Sequence

PEP ID	Os04t0382200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:18740622:18743199:1 gene:Os04g0382200 transcript:Os04t0382200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EXOCYST SUBUNIT EXO70 FAMILY PROTEIN F3 description:Component of Exo70 exocyst complex, Response to the fungal effector, AVR-Pii, Pii-dependent resistance (Os04t0382200-01)
Sequence	MSAPPAPPHPQPEELEVAEEPPAAAGGVGNDKVLAAAQHIVKSLATSKNAADDMIRILSG FDHRFSSITADLFPSPLPSSGAGPTPPPPPPPRGAFEAAERLIRQWDATSELLVFEGPEG DVADYLEAVDVAVDQLLSGVGAAAADAEAEAAGVVVQLAMARMEEELRHLMVRHAVPLDA SGLFCSLRRLSLESMDDLDTSSEFDPITPHSLEGGPDTARSASLVGNPFDDQVFDLVRPE AIDDLRSIAQRMDRAGYASELEQVYCGVRRDLLDECLAVLGVERLSIDEVQRMEWKLLND KMKKWVHGVKTVVRSLLTGERRICDQVLAVSDELRDECFVESTKGCIMQILNFGDAVAVC SRSPEKLSRILDMYEALAEVIPELKELFFGNSGNDVICDLEGVLERLGDAVKGTLLEFGK VLQQESSRRPMMAGEIHPMTRYVMNYLRLLVVYSDTLDKLLGDDSAGDVDHSDTHRGGDD EEEYLESLSPLGRHLVKLISYLEANLEEKSKLYEDGALQCIFSMNNILYIVQKVKDSELG RILGDHWIRRRRGKIRQNSKNYLRISWTKVLSFLKDDAHGGRSGSGSGSGNSSRIKEKFK NFNLAFDEIYRSQTLWKVPDPQLREELKISISENVIPAYRAFLGRYGSLVDSGRNSGRYI KYTPEDLENQLSDLFEGSLGPANHSRRR

Transcript Sequence

Transcript ID	Os04t0382200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:18740622:18743199:1 gene:Os04g0382200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EXOCYST SUBUNIT EXO70 FAMILY PROTEIN F3 description:Component of Exo70 exocyst complex, Response to the fungal effector, AVR-Pii, Pii-dependent resistance (Os04t0382200-01)
Sequence	ATTTTTCTACTGCTTTTACTGCGCCCCAAATCAACCCACCCTCCGCGGCGGCGGCGCGAT TACTCCCGTGCTCGCTCACTTAACCCTAGCTCCCTCGCCGCCGCCGGCGATGTCGGCGCC GCCCGCGCCGCCCCATCCCCAGCCGGAGGAGCTGGAGGTGGCGGAGGAACCCCCCGCCGC GGCGGGAGGAGTGGGGAACGACAAGGTGCTCGCGGCGGCGCAGCACATCGTGAAGTCGCT GGCCACGTCGAAGAACGCCGCGGACGACATGATCCGCATCCTCTCCGGCTTCGACCACCG CTTCTCCTCCATCACCGCCGACCTCTTCCCCTCGCCCTTGCCGTCGTCGGGCGCCGGGCC CACCCCGCCTCCGCCTCCGCCGCCGCGGGGGGCGTTCGAGGCCGCGGAGAGGCTCATCCG GCAGTGGGACGCGACCTCGGAGCTGCTGGTGTTCGAGGGCCCCGAGGGGGACGTCGCCGA CTACCTCGAGGCGGTCGACGTCGCCGTCGACCAGCTGCTCTCCGGGGTGGGGGCCGCCGC CGCCGACGCCGAGGCCGAGGCGGCGGGCGTCGTGGTGCAGCTCGCGATGGCGCGGATGGA GGAGGAGCTCCGCCACCTCATGGTCCGCCACGCGGTGCCGCTGGACGCGAGCGGGCTCTT CTGCTCGCTGCGCCGCCTCTCCCTCGAGTCCATGGACGACCTCGACACCTCCTCCGAGTT CGATCCCATCACCCCGCACAGCCTGGAGGGCGGCCCGGACACCGCTCGCAGCGCCAGCCT CGTGGGGAACCCCTTCGACGACCAGGTGTTCGACCTGGTGCGCCCTGAGGCCATTGACGA TCTGCGCTCCATCGCTCAAAGGATGGACCGCGCGGGGTATGCCAGTGAGCTCGAGCAGGT CTACTGTGGCGTCCGACGTGACCTGCTCGACGAGTGCCTCGCGGTGCTCGGGGTCGAACG CCTCAGCATCGATGAAGTGCAGCGCATGGAGTGGAAGCTTCTGAATGACAAGATGAAGAA ATGGGTGCATGGGGTCAAGACGGTCGTGCGTTCCCTGCTGACCGGTGAGCGCCGGATCTG TGATCAGGTGCTCGCCGTGTCTGATGAGCTGCGTGATGAGTGTTTTGTTGAATCTACCAA GGGTTGCATAATGCAGATTCTTAACTTTGGTGATGCTGTGGCGGTGTGCTCTCGCTCGCC GGAGAAGCTCTCCCGGATTCTTGACATGTATGAGGCACTTGCTGAGGTGATCCCTGAACT GAAGGAGCTGTTCTTTGGGAATTCTGGGAATGATGTAATCTGTGATTTGGAGGGGGTTCT TGAAAGGCTTGGGGACGCAGTGAAGGGCACACTTCTCGAGTTTGGGAAAGTTCTTCAGCA GGAGTCATCACGGCGGCCTATGATGGCTGGTGAGATCCACCCAATGACACGTTACGTGAT GAACTATCTTCGGTTGTTGGTTGTTTACAGTGATACGCTTGACAAACTCTTGGGTGACGA TTCTGCTGGAGATGTTGATCATAGTGATACGCATAGAGGTGGTGATGATGAGGAGGAGTA TTTGGAGAGCTTGTCCCCACTTGGACGACATTTAGTGAAGCTGATATCTTATCTGGAGGC AAATTTGGAGGAAAAATCAAAACTGTACGAGGATGGTGCACTGCAATGCATATTTTCCAT GAATAATATACTCTATATTGTCCAAAAGGTGAAGGACTCTGAACTTGGGAGGATTTTAGG TGATCACTGGATACGGAGGCGCCGTGGGAAGATTCGGCAAAATTCAAAGAACTACCTTAG GATATCATGGACTAAGGTTTTGTCTTTTCTCAAGGATGATGCACACGGCGGCAGAAGCGG AAGTGGAAGTGGTAGTGGGAATAGCTCTAGGATCAAGGAGAAATTCAAGAACTTCAACTT GGCCTTTGATGAGATATACAGGAGTCAAACGCTCTGGAAGGTACCAGATCCTCAGCTTCG TGAAGAGCTCAAGATATCTATCTCTGAAAATGTGATACCAGCATACCGTGCTTTTCTGGG AAGATATGGTAGTCTAGTGGATAGCGGAAGGAATTCAGGTAGATACATCAAATACACCCC AGAGGACTTGGAGAATCAGCTGTCTGATCTATTTGAAGGTTCACTAGGGCCTGCCAACCA TTCTAGGAGAAGATAGTAGCTCCCATTTGACTAAATTTGGTGACAGGTATGCTTTTGCTA CAAGGGATGCTATGTGTCCGAACTGCTGAGTCATCACATGGACTGATTGGTGCCTTTTGA GTTTAGATTGTCCCCTTGGTTATTACAATATTGTAATACTATACAAGGATCCCTTCGTTT TTCTCCATCAGATTATATGTACCAAGAAGTGATGTACATACATTGCTTTTTCAGTGTGTT CATATCCTTGCACACTTCATTTCCATGATCCAGTACCTTTGCACTTTGTAGGGTGGCCAG TTCTTGGAATAGATCAGACAAGTAATAGGCATTTGTTGCTGGAGCAATCTTATCTGGCAA GATACTGATATGAATTAAATACATTTATTGTCGATTCTGAAATAAACGTAATTTTAGT