Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0381100-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:18675970:18681074:1 gene:Os04g0381100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BASS1 description:Similar to OSIGBa0092E09.1 protein. (Os04t0381100-01);Bile acid:sodium symporter family protein. (Os04t0381100-02)
Sequence	ATGCCTCTCCTCCGCCGGCCGCCGGCTGCTCCCCACCGCACCCCGATCCACCATGACAAG CGCCTTCACCTCTTCAGTACACACAACACCCGTCATAGAGCTACCGTCTCATCTCTCCCT GTCACCTGCCTTCGCATCCGATACAGCAGCAGCAACCCGGTTCGACACCTTTGTGGCATT CCGTCGAGCAGGTGCCATGCGGCTGCTGATCCGGCGCCCTCCAAGATACCAGGAGGTGGC AGCGGTGCATTGGAGGCTGGAGTTGTAGGTTGGCGGGATCTGCTTTTGCAGGTTGGCGAG GTGCTGTCGCTTGGGTTCCCAGTGTGGGTGGCGTCCGCTTGCGCCGTTGCGCTTTGGCGG CCACCGGCCTTCCTCTGGGTCAGTCCCATGGCCCAGATTGTCGGCATTTCCTTTACCATG CTGGGAATGGGAATGACATTGACATTAGATGACCTGAAAACTGCACTATTGATGCCCAAG GAGTTAGCATCTGGGTTTTTACTTCAATACTCGGTGATGCCACTGTCAGGATTTCTCATC AGCAAGCTATTAAACTTACCATCCTATTATGCTGCTGGATTGATATTGGTGTCCTGTTGC CCTGGAGGCACAGCAAGCAACATTGTTACATATTTAGCAAGGGGAAATGTTGCTCTTTCG GTACTGATGACAGCAGCAAGCACTTTTGCTGCAGCGTTCTTAACTCCTCTTCTGACATCC AAACTGGCGGGACAATATGTTGCAGTAGATCCAATGGGATTGTTTGTGTCAACATCTCAG GTTGTCCTAGCACCTGTGCTACTTGGTGCTCTACTTAATCAGTACTGCAACGGTTTAGTT CAGTTAGTTTCTCCCTTGATGCCATTCATTGCTGTGGCAACTGTAGCTGTTCTTTGTGGC AATGCTATCGCACAGAATGCTTCAGCCATTCTATCATCCGGTCTACAAGTGGTTATGTCT GTTTGTTGGTTGCATGCATCTGGCTTTTTCTTTGGTTATGTTCTTTCTAGAACGATTGGC ATCGATATCTCTTCATCACGAACAATCTCTATTGAGGTTGGCATGCAGAATTCGGTGCTG GGTGTAGTTCTTGCGAGCAAGCATTTTGGAAATCCTCTCACAGCAGTTCCCTGTGCTGTT TCTAGCGTCTGCCATTCGGTGTATGGTAGCCTTTTAGCTGGAATCTGGAGGTCTTTGCCC CCAAATGACAAGGGCCAGTAA

Peptide Sequence

PEP ID	Os04t0381100-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:18675970:18681074:1 gene:Os04g0381100 transcript:Os04t0381100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BASS1 description:Similar to OSIGBa0092E09.1 protein. (Os04t0381100-01);Bile acid:sodium symporter family protein. (Os04t0381100-02)
Sequence	MPLLRRPPAAPHRTPIHHDKRLHLFSTHNTRHRATVSSLPVTCLRIRYSSSNPVRHLCGI PSSRCHAAADPAPSKIPGGGSGALEAGVVGWRDLLLQVGEVLSLGFPVWVASACAVALWR PPAFLWVSPMAQIVGISFTMLGMGMTLTLDDLKTALLMPKELASGFLLQYSVMPLSGFLI SKLLNLPSYYAAGLILVSCCPGGTASNIVTYLARGNVALSVLMTAASTFAAAFLTPLLTS KLAGQYVAVDPMGLFVSTSQVVLAPVLLGALLNQYCNGLVQLVSPLMPFIAVATVAVLCG NAIAQNASAILSSGLQVVMSVCWLHASGFFFGYVLSRTIGIDISSSRTISIEVGMQNSVL GVVLASKHFGNPLTAVPCAVSSVCHSVYGSLLAGIWRSLPPNDKGQ

Transcript Sequence

Transcript ID	Os04t0381100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:18675970:18681074:1 gene:Os04g0381100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BASS1 description:Similar to OSIGBa0092E09.1 protein. (Os04t0381100-01);Bile acid:sodium symporter family protein. (Os04t0381100-02)
Sequence	GCTCACTCGCTCTCCAGTCTCCACCTCCTCTCGACGCTCGACAGGAAGACGCGCCGCCGC CGCCGCCCATCCGACGCCGCGACGCCGACGTGCCGTGCGTCCGTGACGCCGCCGCCGCCA ATCCCTCCCGCCTTCGCGTCGTGCCGCCGCGCCGTCGGTGGTCGCCCGTCACCCGTCGCC GGCTCGCCGCGTCTTTTGGGTGGCGCCGTCGCGCCTCGTATCCAATCCACCCCGCGCCGC GCCGCGCCGTGCCGCCGCCCCCAAGAGGCCGAGACGCCCAAGTCCCAACTCCCAACGGCC AAAGTAATCGTTGAAGGTGACAGGTCAACATCCCACGTCATGCCTCTCCTCCGCCGGCCG CCGGCTGCTCCCCACCGCACCCCGATCCACCATGACAAGCGCCTTCACCTCTTCAGTACA CACAACACCCGTCATAGAGCTACCGTCTCATCTCTCCCTGTCACCTGCCTTCGCATCCGA TACAGCAGCAGCAACCCGGTTCGACACCTTTGTGGCATTCCGTCGAGCAGGTGCCATGCG GCTGCTGATCCGGCGCCCTCCAAGATACCAGGAGGTGGCAGCGGTGCATTGGAGGCTGGA GTTGTAGGTTGGCGGGATCTGCTTTTGCAGGTTGGCGAGGTGCTGTCGCTTGGGTTCCCA GTGTGGGTGGCGTCCGCTTGCGCCGTTGCGCTTTGGCGGCCACCGGCCTTCCTCTGGGTC AGTCCCATGGCCCAGATTGTCGGCATTTCCTTTACCATGCTGGGAATGGGAATGACATTG ACATTAGATGACCTGAAAACTGCACTATTGATGCCCAAGGAGTTAGCATCTGGGTTTTTA CTTCAATACTCGGTGATGCCACTGTCAGGATTTCTCATCAGCAAGCTATTAAACTTACCA TCCTATTATGCTGCTGGATTGATATTGGTGTCCTGTTGCCCTGGAGGCACAGCAAGCAAC ATTGTTACATATTTAGCAAGGGGAAATGTTGCTCTTTCGGTACTGATGACAGCAGCAAGC ACTTTTGCTGCAGCGTTCTTAACTCCTCTTCTGACATCCAAACTGGCGGGACAATATGTT GCAGTAGATCCAATGGGATTGTTTGTGTCAACATCTCAGGTTGTCCTAGCACCTGTGCTA CTTGGTGCTCTACTTAATCAGTACTGCAACGGTTTAGTTCAGTTAGTTTCTCCCTTGATG CCATTCATTGCTGTGGCAACTGTAGCTGTTCTTTGTGGCAATGCTATCGCACAGAATGCT TCAGCCATTCTATCATCCGGTCTACAAGTGGTTATGTCTGTTTGTTGGTTGCATGCATCT GGCTTTTTCTTTGGTTATGTTCTTTCTAGAACGATTGGCATCGATATCTCTTCATCACGA ACAATCTCTATTGAGGTTGGCATGCAGAATTCGGTGCTGGGTGTAGTTCTTGCGAGCAAG CATTTTGGAAATCCTCTCACAGCAGTTCCCTGTGCTGTTTCTAGCGTCTGCCATTCGGTG TATGGTAGCCTTTTAGCTGGAATCTGGAGGTCTTTGCCCCCAAATGACAAGGGCCAGTAA TGCGTCCTTGACCATGAGATGTCAAGCTGTTATGCCACCAGCAGAAGCCCTCTTAGTCTG CCATCTGCTGCAATAAACACCATGCTTTCATGATTAGCGTCCAGCTTGAACCAGATAGGT GTTGTATTTATTTTTCAATCTGCTTCAGTAAGCACCATGTCTTCATGTTTAGCGTCCAGC TTGAACCAGATAGGTCTTCATTTATCTCGATCATTTTGCATTCAAATCTTGAACTTGGGC ATATTCCTGCGCATGGTTGCCTTAAACAGAACTAGCAATAAACGCGCGCTATACTGTGCG CAGACCATGAATGCATGAAATGAAAAGAAAAAGAAGAGATTTCCG