Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0380200-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:18598963:18601426:1 gene:Os04g0380200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0380200-01);Hypothetical conserved gene. (Os04t0380200-02)
Sequence

ATGAGGTTCAGGTTCCGCAACAAGGCTGCGGCGGCGGGAGACGGCAGCCGGCCGGCCTCT
TCTCCTCCTAACGCCGGCAAGTTCGCGGCGCCTGTTGCCGGCGGCGGAGGGGCGGCGGAC
GTCGCCGGCGAGAGCCCGGATCAGGACAGCACAAGGAATGGAAGCAAAGATGAATCGTTC
TTCGAGGCAAGACCCTGGTTAGACTCCGACAGTGAAGATGATTTCCACAGTGTGAGAGGA
GATTTCACTCCATCAAGAGGCACCACCCCAGATCATCAGAGACAGTCACCATTCGCGGGG
CGAATATCGGTGGACAGATCGGAGCCTTCTCTGATCGAGAAGAAGCAGAGGCTCCTCGAA
CTTCTCCAGGAGAAGCAGCAGTACGACGATGACAGCGTCGCTGATGTCGGTAGCGAGATC
GAGAACGGCGCTGTCCATGCTGAAGAGTATCTGAAATCATCGAGGAAAGGCGCAAAGGCG
AACAGGGCATCCAAGTCCAGGGGAGGCTGCTTCCCAAGCTCTTTTTGGAAGATCAAATTC
AGGAGCTGCAGGAAGAAGAGAAAAGAGCAGAATGATTAG

Peptide Sequence

PEP ID

Os04t0380200-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:18598963:18601426:1 gene:Os04g0380200 transcript:Os04t0380200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0380200-01);Hypothetical conserved gene. (Os04t0380200-02)
Sequence

MRFRFRNKAAAAGDGSRPASSPPNAGKFAAPVAGGGGAADVAGESPDQDSTRNGSKDESF
FEARPWLDSDSEDDFHSVRGDFTPSRGTTPDHQRQSPFAGRISVDRSEPSLIEKKQRLLE
LLQEKQQYDDDSVADVGSEIENGAVHAEEYLKSSRKGAKANRASKSRGGCFPSSFWKIKF
RSCRKKRKEQND

Transcript Sequence

Transcript ID

Os04t0380200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:18598963:18601426:1 gene:Os04g0380200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0380200-01);Hypothetical conserved gene. (Os04t0380200-02)
Sequence

GCATCCGCATTCCACCATCTTCTTCTTCCCCCCAACCCAACAACGGTTTTGGTGTTTCGC
TCCGCCTTCCGCTTCCGCCGCTACGCGTTCGCCTCCCCTGCTCATCCTCTCCTCTCCTCT
CCACTCCACCGCCACCGCCACCGCCACCGCCGCCGCCGCAACGCGTTCTCGCTTTCCGAT
CTCGCGGTGCGGGCGCCCACATGAGGTTCAGGTTCCGCAACAAGGCTGCGGCGGCGGGAG
ACGGCAGCCGGCCGGCCTCTTCTCCTCCTAACGCCGGCAAGTTCGCGGCGCCTGTTGCCG
GCGGCGGAGGGGCGGCGGACGTCGCCGGCGAGAGCCCGGATCAGGACAGCACAAGGAATG
GAAGCAAAGATGAATCGTTCTTCGAGGCAAGACCCTGGTTAGACTCCGACAGTGAAGATG
ATTTCCACAGTGTGAGAGGAGATTTCACTCCATCAAGAGGCACCACCCCAGATCATCAGA
GACAGTCACCATTCGCGGGGCGAATATCGGTGGACAGATCGGAGCCTTCTCTGATCGAGA
AGAAGCAGAGGCTCCTCGAACTTCTCCAGGAGAAGCAGCAGTACGACGATGACAGCGTCG
CTGATGTCGGTAGCGAGATCGAGAACGGCGCTGTCCATGCTGAAGAGTATCTGAAATCAT
CGAGGAAAGGCGCAAAGGCGAACAGGGCATCCAAGTCCAGGGGAGGCTGCTTCCCAAGCT
CTTTTTGGAAGATCAAATTCAGGAGCTGCAGGAAGAAGAGAAAAGAGCAGAATGATTAGC
TGAATTTTAGCAGCATTGTGATGTTGAATTTTGTTTTTCTACTTCCTGTGAAAATTGCTT
TTTACGACAGCGAGGGGAATATATATACTTTTTACCCCTGAAATGCTTCAGCTGGAAACG
ACAAAAAGAAGTTTTGAAGTGGCCGCTTATTGTGCTGTAAAAAAACAAGCAATGCAAATA
TAATGTAGGGAAAAAGTATACATGTTTACTTGTTAATTGTCATTGATGATTTTGTTGGC