Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0379900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:18560190:18564376:-1 gene:Os04g0379900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase). (Os04t0379900-01)
Sequence	ATGGCGTTCGCGGCGTCCCACACCGCATCGCCGTCCTCCTGCGGCGGTGTGGCGCAGAGG AGGAGCAATGGGATGTCGCCGGTGGTGGCCATGGCCTCCACCATCAACAGGGTCAAGACT GCTAAGAAGCCCTACACTCCTCCACGTGAAGTTCATCTCCAAGTCAAGCATTCACTGCCA CCCCAAAAGCGGGAGATTTTCGATTCGCTTCAACCTTGGGCCAAAGAGAACCTTTTGAAC CTCCTGAAGCCAGTTGAGAAGTCATGGCAGCCACAGGACTTCCTGCCAGACCCTTCTTCC GATGGGTTTTATGATGAAGTAAAAGAGCTGCGGGAGAGGGCTAAGGAGATCCCTGATGAC TACTTTGTTTGCTTAGTTGGAGACATGGTTACTGAGGAAGCTCTTCCTACCTATCAAACA ATGCTTAACACCCTTGATGGTGTCCGAGATGAAACTGGCGCAAGCCCAACCACCTGGGCT GTTTGGACAAGAGCATGGACTGCTGAAGAGAACAGGCATGGTGATCTTCTTAATAAGTAC ATGTACCTTACTGGACGTGTTGACATGAAACAAATTGAGAAGACAATACAATACCTGATT GGGTCTGGGATGGATCCAGGAACTGAGAATAATCCCTACTTGGGTTTCCTTTACACATCA TTTCAAGAAAGAGCTACATTTATATCCCATGGCAATACTGCAAGGCACGCCAAGGAGTAC GGGGACCTTAAGCTGGCTCAGATATGTGGGACAATAGCAGCTGATGAGAAGCGCCATGAG ACAGCTTACACCAAGATAGTGGAGAAGCTCTTCGAGATTGATCCTGACTACACAGTTCTT GCATTTGCTGACATGATGAGGAAGAAGATCTCAATGCCTGCTCATCTGATGTATGACGGC AAGGACGACAACTTGTTCGAGCATTTCAGCGCTGTGGCACAGCGGCTGGGTGTCTACACT GCAAGAGACTATGCCGACATCCTGGAGTTCTTGGTCCAGAGGTGGAAAGTCGCAGATCTC ACCGGGCTGTCCGGAGAAGGGAGAAGGGCTCAGGATTTCGTCTGCACGTTGGCGCCGAGA ATCAGGCGGCTGGATGAAAGAGCCCAAGCAAGAGCTAAGCAAGCGCCTGTTATTCCTTTC AGCTGGGTTTATGACCGCAAAGTGCAGCTTTGA

Peptide Sequence

PEP ID	Os04t0379900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:18560190:18564376:-1 gene:Os04g0379900 transcript:Os04t0379900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase). (Os04t0379900-01)
Sequence	MAFAASHTASPSSCGGVAQRRSNGMSPVVAMASTINRVKTAKKPYTPPREVHLQVKHSLP PQKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFLPDPSSDGFYDEVKELRERAKEIPDD YFVCLVGDMVTEEALPTYQTMLNTLDGVRDETGASPTTWAVWTRAWTAEENRHGDLLNKY MYLTGRVDMKQIEKTIQYLIGSGMDPGTENNPYLGFLYTSFQERATFISHGNTARHAKEY GDLKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDYTVLAFADMMRKKISMPAHLMYDG KDDNLFEHFSAVAQRLGVYTARDYADILEFLVQRWKVADLTGLSGEGRRAQDFVCTLAPR IRRLDERAQARAKQAPVIPFSWVYDRKVQL

Transcript Sequence

Transcript ID	Os04t0379900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:18560190:18564376:-1 gene:Os04g0379900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase). (Os04t0379900-01)
Sequence	CTTCTCTAACCCCCTGCTGTTGCTAGCAGAAGTCCAGGTGGACAAGAACGCGAGGAGGGG AAGAATCATCCCCGAGATCTCGCTGCCGCTGCTCATGGCGTTCGCGGCGTCCCACACCGC ATCGCCGTCCTCCTGCGGCGGTGTGGCGCAGAGGAGGAGCAATGGGATGTCGCCGGTGGT GGCCATGGCCTCCACCATCAACAGGGTCAAGACTGCTAAGAAGCCCTACACTCCTCCACG TGAAGTTCATCTCCAAGTCAAGCATTCACTGCCACCCCAAAAGCGGGAGATTTTCGATTC GCTTCAACCTTGGGCCAAAGAGAACCTTTTGAACCTCCTGAAGCCAGTTGAGAAGTCATG GCAGCCACAGGACTTCCTGCCAGACCCTTCTTCCGATGGGTTTTATGATGAAGTAAAAGA GCTGCGGGAGAGGGCTAAGGAGATCCCTGATGACTACTTTGTTTGCTTAGTTGGAGACAT GGTTACTGAGGAAGCTCTTCCTACCTATCAAACAATGCTTAACACCCTTGATGGTGTCCG AGATGAAACTGGCGCAAGCCCAACCACCTGGGCTGTTTGGACAAGAGCATGGACTGCTGA AGAGAACAGGCATGGTGATCTTCTTAATAAGTACATGTACCTTACTGGACGTGTTGACAT GAAACAAATTGAGAAGACAATACAATACCTGATTGGGTCTGGGATGGATCCAGGAACTGA GAATAATCCCTACTTGGGTTTCCTTTACACATCATTTCAAGAAAGAGCTACATTTATATC CCATGGCAATACTGCAAGGCACGCCAAGGAGTACGGGGACCTTAAGCTGGCTCAGATATG TGGGACAATAGCAGCTGATGAGAAGCGCCATGAGACAGCTTACACCAAGATAGTGGAGAA GCTCTTCGAGATTGATCCTGACTACACAGTTCTTGCATTTGCTGACATGATGAGGAAGAA GATCTCAATGCCTGCTCATCTGATGTATGACGGCAAGGACGACAACTTGTTCGAGCATTT CAGCGCTGTGGCACAGCGGCTGGGTGTCTACACTGCAAGAGACTATGCCGACATCCTGGA GTTCTTGGTCCAGAGGTGGAAAGTCGCAGATCTCACCGGGCTGTCCGGAGAAGGGAGAAG GGCTCAGGATTTCGTCTGCACGTTGGCGCCGAGAATCAGGCGGCTGGATGAAAGAGCCCA AGCAAGAGCTAAGCAAGCGCCTGTTATTCCTTTCAGCTGGGTTTATGACCGCAAAGTGCA GCTTTGATCATGATCAGTGAGCAACCGAGACTGCATCCTATATATTGGTTCTAAGATATG AGGTTCTCTATATGGAAAAAAATCTAGGTTATCTAGCTGGGGTAGAATGCAATTACCTGT CCATCTGCCCTCACAAAATCTGTTGTCTTTTAAGTTGATAACAGTGTCGATGAGTCTGGT GAGAAGCTGATGTGAGATGCAACAGAGTGAACTTATGTTGTATTGATGTGAGATGAGTAT GGTGACATTTATGTGTACTTGCAGGTTTTACATGACTTGTATAAGTTTTAAAGTAATAAT GGAGATTTGTATACAGACAAGCGTGTGCACTGTCGCATGATTAAGTAGTCTAAAATCCAG ACTATCTTTTGTGCTCTGAATTTAGCAGTAATAAGATTGATCGGCTTGTTCGTTTTG