Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0379600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:18547278:18550971:1 gene:Os04g0379600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defence response, Rin4 domain containing protein. (Os04t0379600-01)
Sequence	ATGGCACAACCTGACATTCCAGCATTTGGGAACTGGGACACCACTGGCAACACACCATAC ACACAGAAGTTTGAGAATGCCCGCAAAAACAAGAAAGCGGGCATTTCTTCCCATCCCAAC GATCCAAGGAGGCACCCTGAACCTCCATCCAAGTCACCTTTGCATCCAGCATACACACCT GATGCTCAGGGGCAGAGTCCAATGAATCCACAGCATGGAAGAAGGCAGGAAGCTGATCCC CATCGACGGCATTCGCTTTCTCAGCAGCGAGAGGTAGGCGGTGGCATCGGTAGCGCACCG AGAAGCCCATACAGGATGGTTCATGGCTCCGCTTCACCAGCGCAGCCGAACAACCCATCG AAGCCGAAGCACAGGTCATCTGGAATGCAGACTCCAGAGAGGAGGGCTTCATCGGAGGGA CATGGCCAGCATACTCCTAGGAGGAGCAGGGACAAGCAGGGTGGCCGAGGCTATGATGCA CCTGAAGATGATGTAGCTGTTCCACCGTTTGGTGAGTGGGATGAGGGTAATGCAGCATCA GGCGAAAAATTTACTGGTATCTTCAACAGGGTGAGGGATGATAAATTATCGCCAAACACT TCTACCAGGCAACCGGACACTAATCGCAGCCAGGAAAACAAAGTGAAACAGACATGCCCT TGCTGTATACTTTGA

Peptide Sequence

PEP ID	Os04t0379600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:18547278:18550971:1 gene:Os04g0379600 transcript:Os04t0379600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defence response, Rin4 domain containing protein. (Os04t0379600-01)
Sequence	MAQPDIPAFGNWDTTGNTPYTQKFENARKNKKAGISSHPNDPRRHPEPPSKSPLHPAYTP DAQGQSPMNPQHGRRQEADPHRRHSLSQQREVGGGIGSAPRSPYRMVHGSASPAQPNNPS KPKHRSSGMQTPERRASSEGHGQHTPRRSRDKQGGRGYDAPEDDVAVPPFGEWDEGNAAS GEKFTGIFNRVRDDKLSPNTSTRQPDTNRSQENKVKQTCPCCIL

Transcript Sequence

Transcript ID	Os04t0379600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:18547278:18550971:1 gene:Os04g0379600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defence response, Rin4 domain containing protein. (Os04t0379600-01)
Sequence	TGTCTTCTTCTTCCTCCCTTCTCCTTTTCTTCTCCTCACCTCCCCACAGCCTCCTCCTCC CTTCCTCCCCACCTCTGAATTCATCGCTCCTCCTCCTTCGCTTCTGCAATTCAGAAGCTT CGGAATCAGAGGGGGGCAAAGGCGCCGCCTTTGGCTTGGTTTCTTTCTTTCTTGGGGTTG ATCTTGGGTGAGTTCTTTCTCGAGGAAATTCGAGCAAAAACGAGGGAGGATTCGAGTGAT TGTGTTCTTGGATAGATACATGTTCTTGGGAGAGAGGCTTGTTTTCATGTGTTTTCTTGG AGGATTTGCTGTGTGAAGGAAATCACCCTTTTTTCATTTTCCATTTTGTTGATGAGCTGG GGCTGATTTTTTGGAGGGTTGGCGTTAAAGACTCCGCCTTTGACTGTTCTTGGTGTGTGG ATTTTTTTTTACAGCTTTCTTGAAGCAATTTGGTTGTCTCCTGGGAGTGTTGGTTGGTGG TTGGATTCTTGTGTTTGTTTTGTTCGAGTAGTTGGGAGAGTGGCTTTATGGGGAGAATTT AGGTGCTTTTATGAGGAATTCAGGTCAAATTAGGCGCCTTTGGTTCTTGATTTCCCAGGA GGTTTTGATTTGATTTGGTTTTTCCTTTTGAAATTTGGTGAGAGAGCTTCCTTCAATCCT CTACTTGTTTTGATGGTTGGAGGTGATAGGGGACACATTTGATTCTCCTTTGTAGACAAA CCACAAACTTAGAGTTGGATTTGATCCTTTCTTGGGAGGATTTGGAGTGAAATAGTCCAG TTTAGTATTTGGGAGAAAAATATTTGGTCCTTCAGTGCTTTCTTTTGGAGAATTAAGTCT GTTCATCCAAGAATTTGAGGGGGAAGAAGGCGGCACTTTCTACAGGATTGGAAGTCGCTA ATGGCACAACCTGACATTCCAGCATTTGGGAACTGGGACACCACTGGCAACACACCATAC ACACAGAAGTTTGAGAATGCCCGCAAAAACAAGAAAGCGGGCATTTCTTCCCATCCCAAC GATCCAAGGAGGCACCCTGAACCTCCATCCAAGTCACCTTTGCATCCAGCATACACACCT GATGCTCAGGGGCAGAGTCCAATGAATCCACAGCATGGAAGAAGGCAGGAAGCTGATCCC CATCGACGGCATTCGCTTTCTCAGCAGCGAGAGGTAGGCGGTGGCATCGGTAGCGCACCG AGAAGCCCATACAGGATGGTTCATGGCTCCGCTTCACCAGCGCAGCCGAACAACCCATCG AAGCCGAAGCACAGGTCATCTGGAATGCAGACTCCAGAGAGGAGGGCTTCATCGGAGGGA CATGGCCAGCATACTCCTAGGAGGAGCAGGGACAAGCAGGGTGGCCGAGGCTATGATGCA CCTGAAGATGATGTAGCTGTTCCACCGTTTGGTGAGTGGGATGAGGGTAATGCAGCATCA GGCGAAAAATTTACTGGTATCTTCAACAGGGTGAGGGATGATAAATTATCGCCAAACACT TCTACCAGGCAACCGGACACTAATCGCAGCCAGGAAAACAAAGTGAAACAGACATGCCCT TGCTGTATACTTTGAGACAACGGGGGATAAGATCACAGATATTGCTGGAGAGGTTCCTTA GCTACTTGTTGATCAGATTGCTACATTGTGAATTTTCAATTTTCATCGAACTCTGTTCAT GTATTGTTTTCCACGTTTATTGTTGTCGGTGTGAGTATGTATCTGTAATTGAATTTTCCA GTCATCTAGTTTCTATGATTATTCGAAACATATATAGGGTGCCGTTTGGCTCTGGGAAGC ATGGAGTGAGAAATTTTCCTTGCTGATAATAAAATGTTTCCAGAATT