Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0376400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:18392642:18394466:-1 gene:Os04g0376400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 18, catalytic domain domain containing protein. (Os04t0376400-01)
Sequence	ATGGCGGACAAGAACGGCCTCCTCCTCCTTTCCACCATTGCTGCCGTCACTCTCTCCTCC CTCTCGCTCGCGGCGGTAGCCTCGCCGGCGACCCGTAGGAGCCAAGAATCGCGGGAGGCG GTGCGGGCCGGGTACTACCTCGCCGCCGACGCCCACCTCCGGCCGCTCGCCGCGCTCGAC GCGTCGCTGTACACGCACCTCTACTACTACGCCGTGGCGGTCCACCCCGCGCGCCGCACG CTGCTGCTGCCGCCGGACCCGGCGGCGGCGAGCCTACTGGGGGATTTCTCCAGGGCGGTC AAGGCCAAGAACGCCGCCGTCAAGACCGTCCTCTCCATCGGCCGCGGCGGCGGCGCGGGT GGTGCGGCTGCGGTGGCGGGGTCGGGGTCGGACCCCGCGTTCGCCGCCATGGCCGCCGAC CCGGCGTCGCGCGCGGCGTTCATCGGGGCGGCGGTCAAGGTCGCGAGGGAGAATGGGTTC GATGGGCTCGACGTGGCGTGGCGGTTCCCGGCGTCGGCGGTGGAGATGGCGGAGTTCGGG TTCCTCGTCGCCGAGTGGCGCGCCGCGGTGCCCCGCGGGTTCCTGCTCACGGCCACGGTG TACTTTTCCAACCACGTGTTCGACGCGCCGTTCGCCGGCGTGGACTACCCGTCGGAGACC GTCGCGAGGAGCCTCGACTGGGTGAACGTGATGGCGTTCGGGCTCCGCCCGCCCGGCGCC GCCAACGCCAACGCCACGGCGTTCGACGCGCCGCTCTACGACAGGGCGTCGCACTACTCG GCGAGCTACGGCGTCGTGTCGTGGCTCGACGCGGGCGTCCCGGCGAGCAAGGTGGTGATG GGGATCCCGCTCTACGGCCGCTCCTGGTTCCTCCGCAACAAGGCGAACAGCGGCGTCGGC GCGCCGGTGGTCGCCGCGGGGCCGAAGCAGCGGGGCAGCAACGCCACGGGCGCCATGTCC TACGCCGAGGTCCAGTGGCTCGCCGCGACGGCGACGCGCGGCTCCCGCGCGGTGATCACC GCCTACGACAACGCCTCCGTCGCGTCGTACGTGTCCGTCGGCGACGTCTGGGTCGCGTTC GACGGCGTGGCCGTCGTCGCCGAGAAGCTCGCCTTCGCCGCGCGGTGCGGCCTCCTCGGC TACTTCCTCTGGCCGGTCAACTACGACGATGCCAACCTCACCGTGTCGCGGCGAGCATCA CAAGTCTGGACACAGACCAAAATCTCGCCGGAGTTCAAGAACGTCACCGGTGGCGCCCGG CAGACGCAGGCGCCGGTGCAGCGGCCGCCGGCGCTCCAGTCGCCTGCGCCGACCACCGCG CCGATGTCGTCGTCGTCGACGACGTCGTCGTTCTCACGGTTATCTTGGAGAATGCTGGAT GTGCGTCTCCATCTGGGTGCTCTTCTTCTTCTCCTCCTTCTCGTGTGCTACCAAATCTAG

Peptide Sequence

PEP ID	Os04t0376400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:18392642:18394466:-1 gene:Os04g0376400 transcript:Os04t0376400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 18, catalytic domain domain containing protein. (Os04t0376400-01)
Sequence	MADKNGLLLLSTIAAVTLSSLSLAAVASPATRRSQESREAVRAGYYLAADAHLRPLAALD ASLYTHLYYYAVAVHPARRTLLLPPDPAAASLLGDFSRAVKAKNAAVKTVLSIGRGGGAG GAAAVAGSGSDPAFAAMAADPASRAAFIGAAVKVARENGFDGLDVAWRFPASAVEMAEFG FLVAEWRAAVPRGFLLTATVYFSNHVFDAPFAGVDYPSETVARSLDWVNVMAFGLRPPGA ANANATAFDAPLYDRASHYSASYGVVSWLDAGVPASKVVMGIPLYGRSWFLRNKANSGVG APVVAAGPKQRGSNATGAMSYAEVQWLAATATRGSRAVITAYDNASVASYVSVGDVWVAF DGVAVVAEKLAFAARCGLLGYFLWPVNYDDANLTVSRRASQVWTQTKISPEFKNVTGGAR QTQAPVQRPPALQSPAPTTAPMSSSSTTSSFSRLSWRMLDVRLHLGALLLLLLLVCYQI

Transcript Sequence

Transcript ID	Os04t0376400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:18392642:18394466:-1 gene:Os04g0376400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 18, catalytic domain domain containing protein. (Os04t0376400-01)
Sequence	GAGTAAACTTCCATGCAAATGCAAACACTTGCAAAACAACACACCCAAACCTAGATTCCC CACACTCCCATGAGTGTCCATGGCACAAAAACAATGCTCCATCGCCACCACCCACCTCTC CCCTGCACTCACCAATGGCGGACAAGAACGGCCTCCTCCTCCTTTCCACCATTGCTGCCG TCACTCTCTCCTCCCTCTCGCTCGCGGCGGTAGCCTCGCCGGCGACCCGTAGGAGCCAAG AATCGCGGGAGGCGGTGCGGGCCGGGTACTACCTCGCCGCCGACGCCCACCTCCGGCCGC TCGCCGCGCTCGACGCGTCGCTGTACACGCACCTCTACTACTACGCCGTGGCGGTCCACC CCGCGCGCCGCACGCTGCTGCTGCCGCCGGACCCGGCGGCGGCGAGCCTACTGGGGGATT TCTCCAGGGCGGTCAAGGCCAAGAACGCCGCCGTCAAGACCGTCCTCTCCATCGGCCGCG GCGGCGGCGCGGGTGGTGCGGCTGCGGTGGCGGGGTCGGGGTCGGACCCCGCGTTCGCCG CCATGGCCGCCGACCCGGCGTCGCGCGCGGCGTTCATCGGGGCGGCGGTCAAGGTCGCGA GGGAGAATGGGTTCGATGGGCTCGACGTGGCGTGGCGGTTCCCGGCGTCGGCGGTGGAGA TGGCGGAGTTCGGGTTCCTCGTCGCCGAGTGGCGCGCCGCGGTGCCCCGCGGGTTCCTGC TCACGGCCACGGTGTACTTTTCCAACCACGTGTTCGACGCGCCGTTCGCCGGCGTGGACT ACCCGTCGGAGACCGTCGCGAGGAGCCTCGACTGGGTGAACGTGATGGCGTTCGGGCTCC GCCCGCCCGGCGCCGCCAACGCCAACGCCACGGCGTTCGACGCGCCGCTCTACGACAGGG CGTCGCACTACTCGGCGAGCTACGGCGTCGTGTCGTGGCTCGACGCGGGCGTCCCGGCGA GCAAGGTGGTGATGGGGATCCCGCTCTACGGCCGCTCCTGGTTCCTCCGCAACAAGGCGA ACAGCGGCGTCGGCGCGCCGGTGGTCGCCGCGGGGCCGAAGCAGCGGGGCAGCAACGCCA CGGGCGCCATGTCCTACGCCGAGGTCCAGTGGCTCGCCGCGACGGCGACGCGCGGCTCCC GCGCGGTGATCACCGCCTACGACAACGCCTCCGTCGCGTCGTACGTGTCCGTCGGCGACG TCTGGGTCGCGTTCGACGGCGTGGCCGTCGTCGCCGAGAAGCTCGCCTTCGCCGCGCGGT GCGGCCTCCTCGGCTACTTCCTCTGGCCGGTCAACTACGACGATGCCAACCTCACCGTGT CGCGGCGAGCATCACAAGTCTGGACACAGACCAAAATCTCGCCGGAGTTCAAGAACGTCA CCGGTGGCGCCCGGCAGACGCAGGCGCCGGTGCAGCGGCCGCCGGCGCTCCAGTCGCCTG CGCCGACCACCGCGCCGATGTCGTCGTCGTCGACGACGTCGTCGTTCTCACGGTTATCTT GGAGAATGCTGGATGTGCGTCTCCATCTGGGTGCTCTTCTTCTTCTCCTCCTTCTCGTGT GCTACCAAATCTAGAAGAAATGTTAGAAAATTCTTTAGTTTTTATGAAGGTGTTGTGCTC AAATTCAGATTAGTTATTCGTTGCATTTGTAATTTCGTTTCAAATTGTATCATAGCAGCA GGTTCCAATAGGAATTCACATTAACAATGGAGTAAAAACAGTGTGTTTTTGTGACTGACC G