Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0373400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:18212946:18216660:1 gene:Os04g0373400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MATE efflux family protein, expressed. (Os04t0373400-01)
Sequence	ATGGCGGCGCCACCAAGCATGGAGGAGCCTCTTCTTGGAGGCGGCAATGGCGAGGAGAAG AAAGGAGGGAGCTCGAGGCTAGCGGTGGTGGCCGAGGTGAGGAAGCAGCTGTACCTCGCC GGGCCGCTCATCGCCGGGTGGCTGCTGCAGAACGTGGTGCAGATGATCTCCGTCATGTTC GTCGGCCACCTCGGCGAGCTCGAGCTCTCCAGCGCCTCCATCGCCACCTCCTTCGCCGGC GTCACCGGCTTCAGCCTCCTGGCTGGCATGGCGAGCAGCCTGGACACGCTGTGCGGGCAG GCGTTCGGGGCGAAGCAGCACCGGCTCGTGGGCGTGTACAAGCAGCGCGCCATGGTGGTG CTCGGCCTCGCCAGCGTGTGCGTCGCCGCGGTCTGGGCCTACACCGGCGAGCTCCTCCTG CTGTTCGGGCAGGACCCGGAGATCGCGGCGGCGGCGGGGAGCTACATCCGGTGGATGATC CCGGCGCTGCTGGCGTACGGGCCCCTGCAGTGCCACGTCCGGTTCCTGCAGACGCAGAAC GCCGTGATGCCGGTGATGCTCAGCTCCGGCGCCGCCGCGGCGTGCCACCTGCCGGTGTGC TGGCTGCTGGTGTACGGCGCCGGGCTCGGCAGCAAGGGCGCCGCGCTCGCCAACGCCGTC GCCTACCTCGCCAACGCCGCCGCCCTGGCCGCCTACGTCAGGCTGTCGCCAGCGTGCCGG AGCACGTGGACGGGGTTCTCGTCGGAGGCGTTCCACGACTTGGTCGGCTTCATGAGGCTC GCTGTTCCTTCTGCTCTCATGGTCTGCTTGGAGTGGTGGTCGTTTGAGCTCCTTGTGCTG CTCTCCGGACTACTCCCAAATCCGAAGCTGGAAGCATCAGTATTGTCCATTTGCCTGAAC TCGGGTTCCTTGGCATTCATGATCCCTTTCGGCCTTGGTTCAGCCATAAGCACCCGGGTC TCGAATGAGCTCGGCGCCGGTCGACCCGAGGCGGCCCGTCTGGCCAGCCGTGTGGTGATG GCGCTGGGTCTCGTCGTCGGCGTCGCGATCGGGCTCGCCATGATCCTGGTGCGCCATCTA TGGGGTTACGCGTACAGCAACGAGGAGGAGGTGGTCCAGTACGTCGCGAAGATGATGCCC ATTCTTGCCGTCTCGTTCCTCTTCGATGACCTGCAGTGTGTTCTGTCAGGTGTTGCAAGA GGCTGTGGGTGGCAAAAGATTGGTGCCATTGTTAACCTTGGAGCGTACTACCTCGTCGGA ATTCCAGCGGCGCTGTGTTTCGCCTTCGTCTACCATCTTGGTGGCATGGGACTGTGGTTA GGGATAATGTGTGCACTCATCGTTCAGATGCTGTTGCTTCTAGCCATAACAGTGTGCACT AATTGGGAGAAAGAAGCTCTGAAGGCCAAGGAGAGAGTTTTCAGTTCGTCCTTGCCCGCA GACATGACATGA

Peptide Sequence

PEP ID	Os04t0373400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:18212946:18216660:1 gene:Os04g0373400 transcript:Os04t0373400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MATE efflux family protein, expressed. (Os04t0373400-01)
Sequence	MAAPPSMEEPLLGGGNGEEKKGGSSRLAVVAEVRKQLYLAGPLIAGWLLQNVVQMISVMF VGHLGELELSSASIATSFAGVTGFSLLAGMASSLDTLCGQAFGAKQHRLVGVYKQRAMVV LGLASVCVAAVWAYTGELLLLFGQDPEIAAAAGSYIRWMIPALLAYGPLQCHVRFLQTQN AVMPVMLSSGAAAACHLPVCWLLVYGAGLGSKGAALANAVAYLANAAALAAYVRLSPACR STWTGFSSEAFHDLVGFMRLAVPSALMVCLEWWSFELLVLLSGLLPNPKLEASVLSICLN SGSLAFMIPFGLGSAISTRVSNELGAGRPEAARLASRVVMALGLVVGVAIGLAMILVRHL WGYAYSNEEEVVQYVAKMMPILAVSFLFDDLQCVLSGVARGCGWQKIGAIVNLGAYYLVG IPAALCFAFVYHLGGMGLWLGIMCALIVQMLLLLAITVCTNWEKEALKAKERVFSSSLPA DMT

Transcript Sequence

Transcript ID	Os04t0373400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:18212946:18216660:1 gene:Os04g0373400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MATE efflux family protein, expressed. (Os04t0373400-01)
Sequence	GCTGTTGCTCACAACCTTCAGTAAGTAGTTCACCTCATCTGTAATTGTAAACACACTCAT CTTTCTGTTTGAAGTTGAGAAGCAGAGCAAGAAGCTAAGCTTGGGGGGGCGTGGCCATGG CGGCGCCACCAAGCATGGAGGAGCCTCTTCTTGGAGGCGGCAATGGCGAGGAGAAGAAAG GAGGGAGCTCGAGGCTAGCGGTGGTGGCCGAGGTGAGGAAGCAGCTGTACCTCGCCGGGC CGCTCATCGCCGGGTGGCTGCTGCAGAACGTGGTGCAGATGATCTCCGTCATGTTCGTCG GCCACCTCGGCGAGCTCGAGCTCTCCAGCGCCTCCATCGCCACCTCCTTCGCCGGCGTCA CCGGCTTCAGCCTCCTGGCTGGCATGGCGAGCAGCCTGGACACGCTGTGCGGGCAGGCGT TCGGGGCGAAGCAGCACCGGCTCGTGGGCGTGTACAAGCAGCGCGCCATGGTGGTGCTCG GCCTCGCCAGCGTGTGCGTCGCCGCGGTCTGGGCCTACACCGGCGAGCTCCTCCTGCTGT TCGGGCAGGACCCGGAGATCGCGGCGGCGGCGGGGAGCTACATCCGGTGGATGATCCCGG CGCTGCTGGCGTACGGGCCCCTGCAGTGCCACGTCCGGTTCCTGCAGACGCAGAACGCCG TGATGCCGGTGATGCTCAGCTCCGGCGCCGCCGCGGCGTGCCACCTGCCGGTGTGCTGGC TGCTGGTGTACGGCGCCGGGCTCGGCAGCAAGGGCGCCGCGCTCGCCAACGCCGTCGCCT ACCTCGCCAACGCCGCCGCCCTGGCCGCCTACGTCAGGCTGTCGCCAGCGTGCCGGAGCA CGTGGACGGGGTTCTCGTCGGAGGCGTTCCACGACTTGGTCGGCTTCATGAGGCTCGCTG TTCCTTCTGCTCTCATGGTCTGCTTGGAGTGGTGGTCGTTTGAGCTCCTTGTGCTGCTCT CCGGACTACTCCCAAATCCGAAGCTGGAAGCATCAGTATTGTCCATTTGCCTGAACTCGG GTTCCTTGGCATTCATGATCCCTTTCGGCCTTGGTTCAGCCATAAGCACCCGGGTCTCGA ATGAGCTCGGCGCCGGTCGACCCGAGGCGGCCCGTCTGGCCAGCCGTGTGGTGATGGCGC TGGGTCTCGTCGTCGGCGTCGCGATCGGGCTCGCCATGATCCTGGTGCGCCATCTATGGG GTTACGCGTACAGCAACGAGGAGGAGGTGGTCCAGTACGTCGCGAAGATGATGCCCATTC TTGCCGTCTCGTTCCTCTTCGATGACCTGCAGTGTGTTCTGTCAGGTGTTGCAAGAGGCT GTGGGTGGCAAAAGATTGGTGCCATTGTTAACCTTGGAGCGTACTACCTCGTCGGAATTC CAGCGGCGCTGTGTTTCGCCTTCGTCTACCATCTTGGTGGCATGGGACTGTGGTTAGGGA TAATGTGTGCACTCATCGTTCAGATGCTGTTGCTTCTAGCCATAACAGTGTGCACTAATT GGGAGAAAGAAGCTCTGAAGGCCAAGGAGAGAGTTTTCAGTTCGTCCTTGCCCGCAGACA TGACATGATAATACAATGTACACGATCCAAGAACCAAGATGAAGATCGATGGACGATTTT GTTTGGCAATAGTGGCCAAGAAATTCTACGAGACAATGGGAAATTACAGCTTGAGAAATT AAGACCGTCATCTCTATGTTTTGATGACACAATTAATAGTCGCCAAAACAAGGAACTATC TGCAAGGAAGAGTTCAGACAGCGAGAAATCTGCTTTTGGTGGATTTTTTGTCAGACGAAG AAATAAAATGTTATGGACTAGAGACGCTGCATTGGATACAATAATGAATTGAAATGTTCA GTTAACTATATGTAATGGATGTTAGGATTTCGACAATGACACTATTTTGGCTCTACTATT GATTAGATGATTAATTATATTGTAAGTATTATGTGAC