Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0370100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:18001019:18005396:-1 gene:Os04g0370100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WALL-ASSOCIATED KINASE GENE 46 description:Similar to OSIGBa0107E14.7 protein. (Os04t0370100-01)
Sequence	ATGTCTCCCCACCGAGGAGCAGCTGTGGCTTCTATTTGCGCTGCGTTTTATGATAGTATT TGGCTATTGGTACTACTGCTGAGCACGGCGCTGGCTGCAGAGACACTCGACGGTGCGCAG GCAGCGTCGTCGCAATGCCAGAACGCCACCAAGTGCGGTGGTGTAGACATCGTCTACCCG TTCGGCCTCAGTTCAAGCGGCTGCGCTATGTCGCCTTCCTTTGAAGTCGACTGCAACAAC ACCGGGAATGGCGTCCAGAAGCCATTCCTTGGATATGTCGAGCTCCTCAGCATCGATGTC CAGCTTAGTCAGGCCCGCGTGAGGACTCGTATATCTTCTTCCTGCTATAACATCTCAACC CGAGAGATGAACTTCGATGACCTGTGGTATGTGGACCTGAAGGACACGCCGTACAGGTTC TCGGACTCCGCCAACAAGTTCACTATTATTGGGTGCCGAACACTGGCATACATCGCCGAT CAGGATGACGTGGGCAAGTACATGAGCGGCTGTGTCTCCGTCTGCCGGCGAGGTGAACTA ACGAGCCTGATCAATGGCACCTGTTCTGGGAAAGGCTGTTGTCAGACTGCCATCCCAAAG GGCCTCGATTACTACCAGGTGTGGTTTGAGCAAAGCATGAACACGTCGGGGATCTATAAT CGAACCCCCTGCAGCTACGCTGTGCTCATGGAAGCGTCCAACTTCTCCTTTTCAACCACC TACCTGACTTCACCGTTCGAGTTCAACAATACCTATGGCGGCGAGGCACCGGTGGTGCTT GATTGGGCTATCAACACCGCCAACACTTGTGAGGAAGCTATGGGAAATCTCACATCCTAT GCTTGCAAAAGCGACAATGCAAAGTGTATCAACTCCTCCGATACAACAGGCTACATCTGT AGGTGCCAAGAAGGATACCAAGGCAATCCTTACCTTAAAGGTCCCAACGGTTGTCAAGAT ATTAATGAATGTCAACATGGAGAGAATTACCCTTGCTATGGAGATTGCTACAATAAACCT GGAAGTTTCGATTGTGTGTGTCATGCGGGTAGTAGTGGAAATGCGGCAATTCAAGGAGGA TGCCGAAAAGACCTCTTATCACCGAAAACACGACTGGCAATTGGTGTTGTTGCCAGTGTA TTGGCTGTCCTCTTTGGATTCCTAGGATGGGAAGTGATTCGACACAAACAAAAAATTAAA CGACAGGCTCTATTAAGACAGACTGATGAGTTTTTTCAACAACATGGAGGCCAGATATTG CTAGAAATGATGAAAGCAGATGGAAATGATGGGTTCACCCTCTACAAGAGAGGGGAGATA GAGACTGCCACAAATAATTTCAGCAAGGCACATGTCATTGGGGAAGGAGGGCAGGGAACA GTTTATAAGGCTGTTATAGATGGAGTTGCCGTCGCAATAAAGAAGTGCAAGGAGATTGAC GAGAGCAGGAAGATGGAGTTTGTGCAAGAGCTGGTCATACTTTGTCGTGTTAGCCATCCC AACATTGTCAAGTTGCTTGGCTGTTGCCTCCAATTTGAGGCACCGATGCTTGTGTATGAG TTTGTACAGAACAAAACACTGCAAGAGCTGCTAGATCTTCAGAGGAGTAGGCGGTTCCAT GTCACACTGGGAACCCGCCTAAGGATTGCTGCTGAATCCGCAGACGCACTTTCACATCTC CACTCTTTGCCACACCCAATACTCCATGGTGATGTGAAGACAGCCAACATCCTTCTCGCA AATGGCTTGGTTGCAAAGGTGTCTGATTTTGGATGTTCGACGATTGATAAGAGAACTCAG GCTGTACCCAAAGGCACACCAGGGTATATTGACCCGGACTATCTAGTTGAGTACCAACTC ACAACCAGAAATGATGTGTATAGCTTCGGAGTCATTCTTCTTGAGCTTCTAACCGGTAGG AGGCCACTGTCAAAAGAAAGAAAAAGCTTAACACTGATGTTTCAGGAGGCTAGGTCCAAT GGCACACTCATTGAGCTCCTTGACAGTGACATTGTTGATGAAACGAGCATGAGAGTGATC AAGCGGGCTGCAGATCTAGTGAGTCAATGCTTGGTTGTTCCGGGTACGACAAGGCCATCA ATGACACTAGTGGCAGCGGAGCTCCGCCGATTAGCGGAAGCAGATGAAGTGAAGCGAAGC CCACAGCCACCATTGGTGCTCGAGGATCTGAGATTTATGGATATGGGCAGTACAACGAAC ACTTTGTATGGAGAGAGCAGGACGAGTGGGGCTTATAGCTTGGAGAAGAAAGCTGTGTTG AGTATAGAGTTTGCGAGATGA

Peptide Sequence

PEP ID	Os04t0370100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:18001019:18005396:-1 gene:Os04g0370100 transcript:Os04t0370100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WALL-ASSOCIATED KINASE GENE 46 description:Similar to OSIGBa0107E14.7 protein. (Os04t0370100-01)
Sequence	MSPHRGAAVASICAAFYDSIWLLVLLLSTALAAETLDGAQAASSQCQNATKCGGVDIVYP FGLSSSGCAMSPSFEVDCNNTGNGVQKPFLGYVELLSIDVQLSQARVRTRISSSCYNIST REMNFDDLWYVDLKDTPYRFSDSANKFTIIGCRTLAYIADQDDVGKYMSGCVSVCRRGEL TSLINGTCSGKGCCQTAIPKGLDYYQVWFEQSMNTSGIYNRTPCSYAVLMEASNFSFSTT YLTSPFEFNNTYGGEAPVVLDWAINTANTCEEAMGNLTSYACKSDNAKCINSSDTTGYIC RCQEGYQGNPYLKGPNGCQDINECQHGENYPCYGDCYNKPGSFDCVCHAGSSGNAAIQGG CRKDLLSPKTRLAIGVVASVLAVLFGFLGWEVIRHKQKIKRQALLRQTDEFFQQHGGQIL LEMMKADGNDGFTLYKRGEIETATNNFSKAHVIGEGGQGTVYKAVIDGVAVAIKKCKEID ESRKMEFVQELVILCRVSHPNIVKLLGCCLQFEAPMLVYEFVQNKTLQELLDLQRSRRFH VTLGTRLRIAAESADALSHLHSLPHPILHGDVKTANILLANGLVAKVSDFGCSTIDKRTQ AVPKGTPGYIDPDYLVEYQLTTRNDVYSFGVILLELLTGRRPLSKERKSLTLMFQEARSN GTLIELLDSDIVDETSMRVIKRAADLVSQCLVVPGTTRPSMTLVAAELRRLAEADEVKRS PQPPLVLEDLRFMDMGSTTNTLYGESRTSGAYSLEKKAVLSIEFAR

Transcript Sequence

Transcript ID	Os04t0370100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:18001019:18005396:-1 gene:Os04g0370100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WALL-ASSOCIATED KINASE GENE 46 description:Similar to OSIGBa0107E14.7 protein. (Os04t0370100-01)
Sequence	GAGGTTGCAAAAGTAGTGTGCTCGATATATCCACCAAAAGCACACAGATATTCGCTTATC CATGTCTCCCCACCGAGGAGCAGCTGTGGCTTCTATTTGCGCTGCGTTTTATGATAGTAT TTGGCTATTGGTACTACTGCTGAGCACGGCGCTGGCTGCAGAGACACTCGACGGTGCGCA GGCAGCGTCGTCGCAATGCCAGAACGCCACCAAGTGCGGTGGTGTAGACATCGTCTACCC GTTCGGCCTCAGTTCAAGCGGCTGCGCTATGTCGCCTTCCTTTGAAGTCGACTGCAACAA CACCGGGAATGGCGTCCAGAAGCCATTCCTTGGATATGTCGAGCTCCTCAGCATCGATGT CCAGCTTAGTCAGGCCCGCGTGAGGACTCGTATATCTTCTTCCTGCTATAACATCTCAAC CCGAGAGATGAACTTCGATGACCTGTGGTATGTGGACCTGAAGGACACGCCGTACAGGTT CTCGGACTCCGCCAACAAGTTCACTATTATTGGGTGCCGAACACTGGCATACATCGCCGA TCAGGATGACGTGGGCAAGTACATGAGCGGCTGTGTCTCCGTCTGCCGGCGAGGTGAACT AACGAGCCTGATCAATGGCACCTGTTCTGGGAAAGGCTGTTGTCAGACTGCCATCCCAAA GGGCCTCGATTACTACCAGGTGTGGTTTGAGCAAAGCATGAACACGTCGGGGATCTATAA TCGAACCCCCTGCAGCTACGCTGTGCTCATGGAAGCGTCCAACTTCTCCTTTTCAACCAC CTACCTGACTTCACCGTTCGAGTTCAACAATACCTATGGCGGCGAGGCACCGGTGGTGCT TGATTGGGCTATCAACACCGCCAACACTTGTGAGGAAGCTATGGGAAATCTCACATCCTA TGCTTGCAAAAGCGACAATGCAAAGTGTATCAACTCCTCCGATACAACAGGCTACATCTG TAGGTGCCAAGAAGGATACCAAGGCAATCCTTACCTTAAAGGTCCCAACGGTTGTCAAGA TATTAATGAATGTCAACATGGAGAGAATTACCCTTGCTATGGAGATTGCTACAATAAACC TGGAAGTTTCGATTGTGTGTGTCATGCGGGTAGTAGTGGAAATGCGGCAATTCAAGGAGG ATGCCGAAAAGACCTCTTATCACCGAAAACACGACTGGCAATTGGTGTTGTTGCCAGTGT ATTGGCTGTCCTCTTTGGATTCCTAGGATGGGAAGTGATTCGACACAAACAAAAAATTAA ACGACAGGCTCTATTAAGACAGACTGATGAGTTTTTTCAACAACATGGAGGCCAGATATT GCTAGAAATGATGAAAGCAGATGGAAATGATGGGTTCACCCTCTACAAGAGAGGGGAGAT AGAGACTGCCACAAATAATTTCAGCAAGGCACATGTCATTGGGGAAGGAGGGCAGGGAAC AGTTTATAAGGCTGTTATAGATGGAGTTGCCGTCGCAATAAAGAAGTGCAAGGAGATTGA CGAGAGCAGGAAGATGGAGTTTGTGCAAGAGCTGGTCATACTTTGTCGTGTTAGCCATCC CAACATTGTCAAGTTGCTTGGCTGTTGCCTCCAATTTGAGGCACCGATGCTTGTGTATGA GTTTGTACAGAACAAAACACTGCAAGAGCTGCTAGATCTTCAGAGGAGTAGGCGGTTCCA TGTCACACTGGGAACCCGCCTAAGGATTGCTGCTGAATCCGCAGACGCACTTTCACATCT CCACTCTTTGCCACACCCAATACTCCATGGTGATGTGAAGACAGCCAACATCCTTCTCGC AAATGGCTTGGTTGCAAAGGTGTCTGATTTTGGATGTTCGACGATTGATAAGAGAACTCA GGCTGTACCCAAAGGCACACCAGGGTATATTGACCCGGACTATCTAGTTGAGTACCAACT CACAACCAGAAATGATGTGTATAGCTTCGGAGTCATTCTTCTTGAGCTTCTAACCGGTAG GAGGCCACTGTCAAAAGAAAGAAAAAGCTTAACACTGATGTTTCAGGAGGCTAGGTCCAA TGGCACACTCATTGAGCTCCTTGACAGTGACATTGTTGATGAAACGAGCATGAGAGTGAT CAAGCGGGCTGCAGATCTAGTGAGTCAATGCTTGGTTGTTCCGGGTACGACAAGGCCATC AATGACACTAGTGGCAGCGGAGCTCCGCCGATTAGCGGAAGCAGATGAAGTGAAGCGAAG CCCACAGCCACCATTGGTGCTCGAGGATCTGAGATTTATGGATATGGGCAGTACAACGAA CACTTTGTATGGAGAGAGCAGGACGAGTGGGGCTTATAGCTTGGAGAAGAAAGCTGTGTT GAGTATAGAGTTTGCGAGATGATCGATGTATTACTTGTTATATTGATTCCCTTGTGTCGT TTTCTAGTGCGTGTTGGATTTAGTGTTCTTCCTCACTTTGGGGGTGGAGGATCTGGTTTA GTTTTTTTTTTTATTTTTGACTTGAGGATCTGGTTTAGTTGTGTGTGATAGTGAAACATT TGTTGTGTGGATGTGGAGTAACAGTACAAGAACCTGTAAAACATTATAGCATTAAGTGTA TTCTATAACTAATGATTAGTAGAATTGTAATCTAACAAAACTATACAGTACTTCTTTTAT TGTTGTTGC