Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0353600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:16882610:16890074:1 gene:Os04g0353600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 2 description:Similar to OSIGBa0092G14.1 protein. (Os04t0353600-01)
Sequence	ATGGAGACAGGAGGCATAGCGGAGCGTTTCAGAGACAAGACTATACTCATCACCGGCGCT ACTGGCTTCCTGGGAAAATTGCTGGTGGAGAAGATACTACGAGTTCAGCCGGAGGTGAGG AAGCTATACCTGCTAGTTCGTGCTCCGGACGCCATAGCTGCCGAGGAACGTGTTCTCACT GAGGTTGTAGGAAATGGTCTATTTGATGTTCTGCGAGAACAATACGGTGCTGGGTTCCAC TCCTTCATCAAGGAAAAAATATACGCTCTACCTGGAGATGTGACGCATGAAAACTTTGGG CTTGAGAGTTATGACATCCTGCAGTTATCCCAGAAGGTAGATATCATCGTCAATGGAGCT GCAACGACAAACTTTATGGAGAGGTATGATGTCGCTTTAGCAACAAATACAACAGGAGTC GTGCATTTATGTCAGTTTGCAAAGCAGTGTGATAACCTCAAGATGGTGCTTCATGTTTCC ACCGCTTATGTAGCCGGTGAGCAAGCAGGCCAGATATTCGAGAAACCATTCCAGATCGGT ACAGCATTACGACTGGATTACCAGTTGGACATTGAAGCTGAGCTGCAACTAGTGGACAAG ATCAAGTCAGAACTCGGAATAAACAGTGACAGCAAGTTAGAAAAAATAACCATGAGGAAA CTTGGGCTTGAAAGGGCCGTGCACTTTGGTTGGCCAAATACATACACACTGACGAAAGCT ATGGGGGAGATGTTACTTCAACAATTGGGACAAGACCTTCCCGTTGTCATCGTCCGGCCA AGCATGATAACAAGCACTTTTCAGGAACCAATGCCTGGGTGGATAGAACAAACTAGGACA ATTGATGTCATATTTGTTGCATACAATGACCAAACCCTTCCATGTTTTATATTTGATGGT AGTGTTATATTTGACCTGATACCTGGGGATATGGTGATCAACGCAATGATGGCAGCCATA AACAGTCAGTGGAATAAACAAGCTCAAGTGATATACCATGTGACTTCCTCTCACCAAAAT CCCGTACCGTTATCTCTTATTGAAGAATCATTGTACAAATACTTTCACAAAAATCCACGT ACAAGTAAAGATGGGAAGGCAATACAAAATGAAAAAATTTTAACGTTCAATAGGTTAGTA TACTTCCAGGCATACATGATTCTACGGTACAAGGTACCATTGGAGATGATGCGTGCAGCA AATGTACTGTTGGGAGGGATATACACCAAGAACTACTATGAGCTTAACCGAGGCTACAAC ATTTTAATGACTGTGGCAAAGCTGTATGCCCCATATGTATTCTTCAAAGGATGGTTTGAT GACACCAACCTGAGGAAACTGTGGAAGGCGACGGCTATGGACCAAAATGATGATGCATCC ATATTTAATTTTGATCCTAAGTGCATTAACTGGAGCTCATACCTCGTGAACACCCACATT CCAGCTGCTATAAAGTATGCCAATAACCAGAAGACGAAAGCACGCAGTGCATAA

Peptide Sequence

PEP ID	Os04t0353600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:16882610:16890074:1 gene:Os04g0353600 transcript:Os04t0353600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 2 description:Similar to OSIGBa0092G14.1 protein. (Os04t0353600-01)
Sequence	METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT EVVGNGLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGA ATTNFMERYDVALATNTTGVVHLCQFAKQCDNLKMVLHVSTAYVAGEQAGQIFEKPFQIG TALRLDYQLDIEAELQLVDKIKSELGINSDSKLEKITMRKLGLERAVHFGWPNTYTLTKA MGEMLLQQLGQDLPVVIVRPSMITSTFQEPMPGWIEQTRTIDVIFVAYNDQTLPCFIFDG SVIFDLIPGDMVINAMMAAINSQWNKQAQVIYHVTSSHQNPVPLSLIEESLYKYFHKNPR TSKDGKAIQNEKILTFNRLVYFQAYMILRYKVPLEMMRAANVLLGGIYTKNYYELNRGYN ILMTVAKLYAPYVFFKGWFDDTNLRKLWKATAMDQNDDASIFNFDPKCINWSSYLVNTHI PAAIKYANNQKTKARSA

Transcript Sequence

Transcript ID	Os04t0353600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:16882610:16890074:1 gene:Os04g0353600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 2 description:Similar to OSIGBa0092G14.1 protein. (Os04t0353600-01)
Sequence	GACAGAGAGGTTGCGAGCTCTAGGAAGATATATCGATACGCCATGGAGACAGGAGGCATA GCGGAGCGTTTCAGAGACAAGACTATACTCATCACCGGCGCTACTGGCTTCCTGGGAAAA TTGCTGGTGGAGAAGATACTACGAGTTCAGCCGGAGGTGAGGAAGCTATACCTGCTAGTT CGTGCTCCGGACGCCATAGCTGCCGAGGAACGTGTTCTCACTGAGGTTGTAGGAAATGGT CTATTTGATGTTCTGCGAGAACAATACGGTGCTGGGTTCCACTCCTTCATCAAGGAAAAA ATATACGCTCTACCTGGAGATGTGACGCATGAAAACTTTGGGCTTGAGAGTTATGACATC CTGCAGTTATCCCAGAAGGTAGATATCATCGTCAATGGAGCTGCAACGACAAACTTTATG GAGAGGTATGATGTCGCTTTAGCAACAAATACAACAGGAGTCGTGCATTTATGTCAGTTT GCAAAGCAGTGTGATAACCTCAAGATGGTGCTTCATGTTTCCACCGCTTATGTAGCCGGT GAGCAAGCAGGCCAGATATTCGAGAAACCATTCCAGATCGGTACAGCATTACGACTGGAT TACCAGTTGGACATTGAAGCTGAGCTGCAACTAGTGGACAAGATCAAGTCAGAACTCGGA ATAAACAGTGACAGCAAGTTAGAAAAAATAACCATGAGGAAACTTGGGCTTGAAAGGGCC GTGCACTTTGGTTGGCCAAATACATACACACTGACGAAAGCTATGGGGGAGATGTTACTT CAACAATTGGGACAAGACCTTCCCGTTGTCATCGTCCGGCCAAGCATGATAACAAGCACT TTTCAGGAACCAATGCCTGGGTGGATAGAACAAACTAGGACAATTGATGTCATATTTGTT GCATACAATGACCAAACCCTTCCATGTTTTATATTTGATGGTAGTGTTATATTTGACCTG ATACCTGGGGATATGGTGATCAACGCAATGATGGCAGCCATAAACAGTCAGTGGAATAAA CAAGCTCAAGTGATATACCATGTGACTTCCTCTCACCAAAATCCCGTACCGTTATCTCTT ATTGAAGAATCATTGTACAAATACTTTCACAAAAATCCACGTACAAGTAAAGATGGGAAG GCAATACAAAATGAAAAAATTTTAACGTTCAATAGGTTAGTATACTTCCAGGCATACATG ATTCTACGGTACAAGGTACCATTGGAGATGATGCGTGCAGCAAATGTACTGTTGGGAGGG ATATACACCAAGAACTACTATGAGCTTAACCGAGGCTACAACATTTTAATGACTGTGGCA AAGCTGTATGCCCCATATGTATTCTTCAAAGGATGGTTTGATGACACCAACCTGAGGAAA CTGTGGAAGGCGACGGCTATGGACCAAAATGATGATGCATCCATATTTAATTTTGATCCT AAGTGCATTAACTGGAGCTCATACCTCGTGAACACCCACATTCCAGCTGCTATAAAGTAT GCCAATAACCAGAAGACGAAAGCACGCAGTGCATAAAAACATATTTAGATGATGATGTAC ATGCAAGGTGTTAGTTTGCATGCTGAAAATATTGCTATTATTATATGAAAAAATAGTGTG GAATAAGTGATCTATGTCGGGTGGGAACTCTCATCTATGGCAGTGAGAGCGCTTACTATC ACTGTTGCCATTGCTATTATAAAACATTCATGTTATAAATATTGGTGCTCCACTAGAGTT GTCATTGCTATTCT