Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0350700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:16731738:16735336:-1 gene:Os04g0350700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AWN1 description:Basic helix-loop-helix protein, Regulation of awn development, grain size, and grain number (Os04t0350700-01)
Sequence	ATGAACCCCACCACCGCCGCCGCCGCCGACCAACCATCCAAGCCCTCCGCCGCCGCCGCC GCCCGGAAGCGCAAGTCGTCGGCGAAGCCCAAGGCCTCGTCCTCATCCTTACCCACGGCC ACGGCGACGACGAACGCGAGCCCGAAGCGGTCCAAGGTCGCCGCCGGCGCCGGAGACGAC GGCGACGCCGACGCCGACGCGGCGGAGGAGAAGCCGGAGCCAGCCAAAGACTACATCCAT GTGAGGGCGAGGCGGGGGCAAGCCACCGATAGCCATAGCCTCGCCGAGAGGGTGAGGAGG GAGAGGATAAGCGAGAGGATGAAGCTTCTGCAGTCGCTCGTGCCAGGCTGCAACAAGATC ACCGGCAAGGCTCTCATGCTGGACGAGATCATCAACTATGTGCAGTCGCTGCAGCGTCAG GTCGAGTTTTTGTCCATGAAGTTGGCGACCATGAATCCTCAGCTGGACTTTGACAGCCAT TACATGCCTTCCAAAGATATGAGCCATATGCCAGTACCCGCATACCCGTCAAGCGATCCG ACCACCACCACCGCGTTCTCCTACACCGGCTCACCCGCCACTGCTGATCCATTCACCGTC TACAACTGCTGGGAGCTCGACCTCCACACCGCTATGCAAATGGGAGCCACCACCGGACTC AGCCAAGACGGTCCAATCGCAACGATGGCACCCTCTCCCTCGCCATTGCCGCACCATCCT CCTCTTCACGGCTTCTACGGGGGGCAGCAGCAGCAGGGGACGACAGTAAACCACATGAAG GCCGAGCCATAA

Peptide Sequence

PEP ID	Os04t0350700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:16731738:16735336:-1 gene:Os04g0350700 transcript:Os04t0350700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AWN1 description:Basic helix-loop-helix protein, Regulation of awn development, grain size, and grain number (Os04t0350700-01)
Sequence	MNPTTAAAADQPSKPSAAAAARKRKSSAKPKASSSSLPTATATTNASPKRSKVAAGAGDD GDADADAAEEKPEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKI TGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHMPVPAYPSSDP TTTTAFSYTGSPATADPFTVYNCWELDLHTAMQMGATTGLSQDGPIATMAPSPSPLPHHP PLHGFYGGQQQQGTTVNHMKAEP

Transcript Sequence

Transcript ID	Os04t0350700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:16731738:16735336:-1 gene:Os04g0350700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AWN1 description:Basic helix-loop-helix protein, Regulation of awn development, grain size, and grain number (Os04t0350700-01)
Sequence	TCCCCTCTCCTCTCTCTCTCTCTTCTCTCCTCCTCCACTCTCCCACGCCGCCGACGACGA CGATGGCCGACGAGCACTTCTTCCCCGCCGGCGGCAGGCTGTCCCGTGTCTCCAGCAGCA AGTCCCTCCGGGCGCCGCCGCGGCATTGGACAGCTCCGAGGCCGACATGAACCCCACCAC CGCCGCCGCCGCCGACCAACCATCCAAGCCCTCCGCCGCCGCCGCCGCCCGGAAGCGCAA GTCGTCGGCGAAGCCCAAGGCCTCGTCCTCATCCTTACCCACGGCCACGGCGACGACGAA CGCGAGCCCGAAGCGGTCCAAGGTCGCCGCCGGCGCCGGAGACGACGGCGACGCCGACGC CGACGCGGCGGAGGAGAAGCCGGAGCCAGCCAAAGACTACATCCATGTGAGGGCGAGGCG GGGGCAAGCCACCGATAGCCATAGCCTCGCCGAGAGGGTGAGGAGGGAGAGGATAAGCGA GAGGATGAAGCTTCTGCAGTCGCTCGTGCCAGGCTGCAACAAGATCACCGGCAAGGCTCT CATGCTGGACGAGATCATCAACTATGTGCAGTCGCTGCAGCGTCAGGTCGAGTTTTTGTC CATGAAGTTGGCGACCATGAATCCTCAGCTGGACTTTGACAGCCATTACATGCCTTCCAA AGATATGAGCCATATGCCAGTACCCGCATACCCGTCAAGCGATCCGACCACCACCACCGC GTTCTCCTACACCGGCTCACCCGCCACTGCTGATCCATTCACCGTCTACAACTGCTGGGA GCTCGACCTCCACACCGCTATGCAAATGGGAGCCACCACCGGACTCAGCCAAGACGGTCC AATCGCAACGATGGCACCCTCTCCCTCGCCATTGCCGCACCATCCTCCTCTTCACGGCTT CTACGGGGGGCAGCAGCAGCAGGGGACGACAGTAAACCACATGAAGGCCGAGCCATAATA AATGCGGCGACCTCTCCTTCTGTACATACGCCCAGCCGCCGTACGTGTACTCCGCTTTTC TGCTCCCATCCTGCAGCATCAGCATCACCAGCAGCAGCAAACCCAAGCTCACAATCATTG CCATCAAAGAAGAAAGAAGAGGATGTTGTGTGTGACTGTGTGTGTGGCTTTGATCATGGC TTTGGCTTGATCCTACAAAAGCCACTATCTTTTTTTCCGCTTTTCTACCCCTCTGCCGTC TGTCACTGCAGGTGGGGCCCAGCTGCACAGGGAAGGAGAAGGTTTTCCAAGGCTTAACTT TTTCCAGATGCAGTGTCATATTGTTTAGGCAAAGAACTTGTTTTGATGTTGTGATGCTTG TAGGACAGAGGAGTATATGTGTAGTATGTCTGGAAATGGCAAGGCAGGGGAGCTGTGTGA CCTTTGTGTGTGCTGGTTGCATGCCCTAACTGTAGAAAAAAAAAAGAGGAGGATTGTGCT AGTGATGTTAGTAGTGGTAGTGGCTTTGTAGGATTTGGCATGCATGGGGATGTATGTACT ATGTATGTAGAGATTGGAGAGGATTTTGAAAAACACCTTCCTTTTTTGTGGACATTGTTT TGTATCAAGAGTACTGGAATCATCATGCATGCAAGAAATGTTCTTTGAACAAT