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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0350100-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:16694177:16694832:-1 gene:Os04g0350100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteinase inhibitor I25, cystatin domain containing protein. (Os04t0350100-01)
Sequence

ATGGCCACCTCTCCTATGCTCTTCCTTGTCTCCCTCCTACTAGTACTAGTCGCCGCCGCC
ACTGGCGACGAGGCATCGCCGTCGAACGCGGCGGCGCCGGCGGCGCCCGTGCTGGTCGGC
GGGAGGACGGAGATCAGGGACGTGGGCAGCAACAAGGCGGTGCAGTCGCTGGGCCGCTTC
GCCGTCGCCGAGCACAACCGCCGCCTCCGCCACGGCGGCTCCGGCGGCCCCGCCGACCCC
GTCCCGGTGAAGCTCGCGTTCGCACGCGTCGTGGAGGCGCAGAAGCAGGTCGTCTCCGGC
GTGGCCTACTACCTCAAGGTCGCCGCGAGCGCGAGGGACCCCCGCGGCGGCGCCGCCGCC
GGCGGTGACCGGGTGTTCGACGCCGTGGTGGTGGTGAAGGCCTGGCTCAAATCCAAGGAG
CTCGTCTCCTTCACGCCTGCTTCTTCTACCAAATAA

Peptide Sequence

PEP ID

Os04t0350100-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:16694177:16694832:-1 gene:Os04g0350100 transcript:Os04t0350100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteinase inhibitor I25, cystatin domain containing protein. (Os04t0350100-01)
Sequence

MATSPMLFLVSLLLVLVAAATGDEASPSNAAAPAAPVLVGGRTEIRDVGSNKAVQSLGRF
AVAEHNRRLRHGGSGGPADPVPVKLAFARVVEAQKQVVSGVAYYLKVAASARDPRGGAAA
GGDRVFDAVVVVKAWLKSKELVSFTPASSTK

Transcript Sequence

Transcript ID

Os04t0350100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:16694177:16694832:-1 gene:Os04g0350100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteinase inhibitor I25, cystatin domain containing protein. (Os04t0350100-01)
Sequence

CAGCAGCACAGCACACGGCTGCAACAATGGCCACCTCTCCTATGCTCTTCCTTGTCTCCC
TCCTACTAGTACTAGTCGCCGCCGCCACTGGCGACGAGGCATCGCCGTCGAACGCGGCGG
CGCCGGCGGCGCCCGTGCTGGTCGGCGGGAGGACGGAGATCAGGGACGTGGGCAGCAACA
AGGCGGTGCAGTCGCTGGGCCGCTTCGCCGTCGCCGAGCACAACCGCCGCCTCCGCCACG
GCGGCTCCGGCGGCCCCGCCGACCCCGTCCCGGTGAAGCTCGCGTTCGCACGCGTCGTGG
AGGCGCAGAAGCAGGTCGTCTCCGGCGTGGCCTACTACCTCAAGGTCGCCGCGAGCGCGA
GGGACCCCCGCGGCGGCGCCGCCGCCGGCGGTGACCGGGTGTTCGACGCCGTGGTGGTGG
TGAAGGCCTGGCTCAAATCCAAGGAGCTCGTCTCCTTCACGCCTGCTTCTTCTACCAAAT
AATCATGCTCAAATATATGTATTAGTTTCACTCTAATTATATTAATTATTACTAGTTGGA
CTTTACTCCCTCCGTCTAATAAAAAATCAACCCTAGTACGGATGTAATACATTATAGTAC
TACGAATCAGACATCCGGTACCATAGTTTTTTATGGAACGGAGATATTAGTTTTTT