Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0350000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:16685127:16687603:1 gene:Os04g0350000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PPR protein. (Os04t0350000-01);Hypothetical conserved gene. (Os04t0350000-02);Similar to PPR protein. (Os04t0350000-03)
Sequence	ATGTCGCAGACAACCGCACCCATGTCCCGCCGCCGTCTCTCCTCCATCCTCGCCAGCACC GCCACCGCCTCCTCCACGGCGGCGTCGACCACCACCGCGGCGACGGCATCGCCGGCACGC CCATCCCCTCCCGCCCACGCCGCGTTCCGGGAGCGTCTGCGGTCGGGAACGCTCGGTCCC GACGACGCGCGCCACCTGTTCGACGAATTGCTGCTTCGCCGCGACGCCCCCGCCCCCGCG CGAGGCCTCAACGAGCTCCTCTCCGCGCTCGCCCGCGCGCCGCCCTCCGCCGCCTGCAGG GACGTCCCAGCCCTCGCCGTCGAGCTGTTCAAACGGATGGACCGGTGCGCCTGCCCCGAG GCCGCTCCCACCATCTACACCTACAACATCCTCATCAACTGCTACCGCCGCGCGCGCCGC CCCGACCTCGGGCTCCCCGTCTTCGGCCGCTTGCTCAGGACGGGCCTGGGGCCGGATGTG TTCTCGTACAACGCGCTCATCGACGGATTCTCTAAGGAGGGCGAGGTGGACAAAGCTCAC GACCTGTTCTACAAGATGGAAGAACAGGGCATCATGCCAAATGTGGTGACTTACAGCTCG CTGATCAATGGGCTGTGCAAGACGAAAGAAATGGACAAGGCCGAGAGGGTTCTACGACAG ATGGTCGGCGCTGGTGTTCGGCCTAATAATATGACTTACAACTGCTTGATCCATGGATAC TCCACTTCAGGAATGTGGAAGGAGTCGGTCAGAGTGTTCAAAGAGATGTCGAGCTCCCTT CTCGTACCGGATGTCGGCAATTGTAACTCCTTCATGACTGCTCTTTGCAAGCATGGTAGA ATCAAAGAAGCAAGAGATATTTTCGATTCGATGGTTCTGAAGGGCCCCAAACCTGATGTT ATCTCCTATGGTGCTCTGCTTCATGGTTATGCTACTGCGGGATGCATAGCTGGAATGGAT AATCTCTTTAATGTGATGGTATGTGAAGGCGTCGTACCTGACCGTCATGTTTTCAACACA CTGATTAATGCATATGCTAGATTGGGGATGATGGATAAGTCCCTGCTTATGTTTGAAGAT ATGACGAAGCAAGGCGTGAACCCTGATATAATCACATTTTCAACTGTGATATCCGCTTTT TGCAGACTGGGTAGGTTGGATGATGCTATGGAAAAATTCAATCACATGATTGATACTGGT GTACCTCCGGACACAGCTGTTTACAGTTGTCTGATTCAGGGTCAATGTAATCGTCGTGAT TTGGTGAAAGCCAAGGAATTGATTTCTGATATGTTGAGCAAGGGCATTCCTCCTCCTTGC ATCAAGTTCTTCACCTCGATTATAAACAACCTATGTAAGGAAGGAAGGGTAGCGGAAGGG AAAGATGTCGTGGACTTGATTATACATACCGGTCAGAGGCCTAATCTTATTACGTTCAAT TCACTGGTAGATGGATATTGCTTAGTTGGCAATATGAAGGAAGCTGTTGGATTACTTGAT TCTATGGAGTCGGTTGGTGTTGAACCTGACATTTATACATATAACACACTTGTTGATGGT TATTGTAAACATGGAAGGATTGACGACGCGTTGACTCTATTCAGAGATATGTTGCACAAG AGAGTGACACTTACAAGTGTTTCATACAACATCATTCTCCATGGGTTATTTCAAGCTAGG AGGACAATTGTTGCAAAGGAAATGTTCCATGAGATGATTGAAAGTGGAATGGCCGTGAGC ATTCACACATATGCTACTGTTCTTGGAGGACTTTGTAGAAATAACTGCACCGATGAAGCT AACATGCTGTTGGAGAAATTGTTTTCTATGAATGTTAAGTTTGATATCCTTACTTTCAAT ATTGTGATTAGAGCAATGTTCAAAGTTGGCAGAAGGCAAGAAGCTAAGGAATTGTTTGCT GCTATCTCTACCTATGGGTTGGTGCCTACTATACTTACCTATAGGGTGATGATAACAAAT CTTATAAAAGAGGAATCATTCGAAGATGCTGACAATCTTTTTTCATCAATGGAGAAGAGT AGCTGTACTCCTGACTCTCGCATATTAAATGAGATCATTAGAATGTTACTCAATAAAGGT GAGGTTGCCAAGGCTGGAAATTATTTGTCTAAAATTGATAAGAAGGGTATCTTGCCTGAA GCTACAACCACTTCCTTGTTAATTTATCTATTTTCAGTGAATGGGAAATATCGAGAATAC ATAAAATTGCTCCCTGAAAAGTATCGTTTTCTAAGGGAGCAAGCTGCAGTTGATAATTGT ATCTGA

Peptide Sequence

PEP ID	Os04t0350000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:16685127:16687603:1 gene:Os04g0350000 transcript:Os04t0350000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PPR protein. (Os04t0350000-01);Hypothetical conserved gene. (Os04t0350000-02);Similar to PPR protein. (Os04t0350000-03)
Sequence	MSQTTAPMSRRRLSSILASTATASSTAASTTTAATASPARPSPPAHAAFRERLRSGTLGP DDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPE AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFED MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN SLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITN LIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE ATTTSLLIYLFSVNGKYREYIKLLPEKYRFLREQAAVDNCI

Transcript Sequence

Transcript ID	Os04t0350000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:16685127:16687603:1 gene:Os04g0350000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PPR protein. (Os04t0350000-01);Hypothetical conserved gene. (Os04t0350000-02);Similar to PPR protein. (Os04t0350000-03)
Sequence	ATGAGGTCCTCTCGAACCCAGCCGACGAACGAGCTTGTGCGCCTTGGCTCCTAACGCCGC CGGCTGGCCGGCCGCCGGCGGCGGCGGCGGAGGAGAAGCCCAGGCTGTTGACGACGGCGC GACGACGGCGCCGGCGCAGATCCACGTCGGTCATGTCGCAGACAACCGCACCCATGTCCC GCCGCCGTCTCTCCTCCATCCTCGCCAGCACCGCCACCGCCTCCTCCACGGCGGCGTCGA CCACCACCGCGGCGACGGCATCGCCGGCACGCCCATCCCCTCCCGCCCACGCCGCGTTCC GGGAGCGTCTGCGGTCGGGAACGCTCGGTCCCGACGACGCGCGCCACCTGTTCGACGAAT TGCTGCTTCGCCGCGACGCCCCCGCCCCCGCGCGAGGCCTCAACGAGCTCCTCTCCGCGC TCGCCCGCGCGCCGCCCTCCGCCGCCTGCAGGGACGTCCCAGCCCTCGCCGTCGAGCTGT TCAAACGGATGGACCGGTGCGCCTGCCCCGAGGCCGCTCCCACCATCTACACCTACAACA TCCTCATCAACTGCTACCGCCGCGCGCGCCGCCCCGACCTCGGGCTCCCCGTCTTCGGCC GCTTGCTCAGGACGGGCCTGGGGCCGGATGTGTTCTCGTACAACGCGCTCATCGACGGAT TCTCTAAGGAGGGCGAGGTGGACAAAGCTCACGACCTGTTCTACAAGATGGAAGAACAGG GCATCATGCCAAATGTGGTGACTTACAGCTCGCTGATCAATGGGCTGTGCAAGACGAAAG AAATGGACAAGGCCGAGAGGGTTCTACGACAGATGGTCGGCGCTGGTGTTCGGCCTAATA ATATGACTTACAACTGCTTGATCCATGGATACTCCACTTCAGGAATGTGGAAGGAGTCGG TCAGAGTGTTCAAAGAGATGTCGAGCTCCCTTCTCGTACCGGATGTCGGCAATTGTAACT CCTTCATGACTGCTCTTTGCAAGCATGGTAGAATCAAAGAAGCAAGAGATATTTTCGATT CGATGGTTCTGAAGGGCCCCAAACCTGATGTTATCTCCTATGGTGCTCTGCTTCATGGTT ATGCTACTGCGGGATGCATAGCTGGAATGGATAATCTCTTTAATGTGATGGTATGTGAAG GCGTCGTACCTGACCGTCATGTTTTCAACACACTGATTAATGCATATGCTAGATTGGGGA TGATGGATAAGTCCCTGCTTATGTTTGAAGATATGACGAAGCAAGGCGTGAACCCTGATA TAATCACATTTTCAACTGTGATATCCGCTTTTTGCAGACTGGGTAGGTTGGATGATGCTA TGGAAAAATTCAATCACATGATTGATACTGGTGTACCTCCGGACACAGCTGTTTACAGTT GTCTGATTCAGGGTCAATGTAATCGTCGTGATTTGGTGAAAGCCAAGGAATTGATTTCTG ATATGTTGAGCAAGGGCATTCCTCCTCCTTGCATCAAGTTCTTCACCTCGATTATAAACA ACCTATGTAAGGAAGGAAGGGTAGCGGAAGGGAAAGATGTCGTGGACTTGATTATACATA CCGGTCAGAGGCCTAATCTTATTACGTTCAATTCACTGGTAGATGGATATTGCTTAGTTG GCAATATGAAGGAAGCTGTTGGATTACTTGATTCTATGGAGTCGGTTGGTGTTGAACCTG ACATTTATACATATAACACACTTGTTGATGGTTATTGTAAACATGGAAGGATTGACGACG CGTTGACTCTATTCAGAGATATGTTGCACAAGAGAGTGACACTTACAAGTGTTTCATACA ACATCATTCTCCATGGGTTATTTCAAGCTAGGAGGACAATTGTTGCAAAGGAAATGTTCC ATGAGATGATTGAAAGTGGAATGGCCGTGAGCATTCACACATATGCTACTGTTCTTGGAG GACTTTGTAGAAATAACTGCACCGATGAAGCTAACATGCTGTTGGAGAAATTGTTTTCTA TGAATGTTAAGTTTGATATCCTTACTTTCAATATTGTGATTAGAGCAATGTTCAAAGTTG GCAGAAGGCAAGAAGCTAAGGAATTGTTTGCTGCTATCTCTACCTATGGGTTGGTGCCTA CTATACTTACCTATAGGGTGATGATAACAAATCTTATAAAAGAGGAATCATTCGAAGATG CTGACAATCTTTTTTCATCAATGGAGAAGAGTAGCTGTACTCCTGACTCTCGCATATTAA ATGAGATCATTAGAATGTTACTCAATAAAGGTGAGGTTGCCAAGGCTGGAAATTATTTGT CTAAAATTGATAAGAAGGGTATCTTGCCTGAAGCTACAACCACTTCCTTGTTAATTTATC TATTTTCAGTGAATGGGAAATATCGAGAATACATAAAATTGCTCCCTGAAAAGTATCGTT TTCTAAGGGAGCAAGCTGCAGTTGATAATTGTATCTGAATTTAAATCCTCAGAAGGTAAA CTTGAATTGTCTTTTCT