Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0349700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:16667270:16670469:-1 gene:Os04g0349700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, typical subtype containing protein. (Os04t0349700-01)
Sequence	ATTCTTTTTCCCCTCAGGTACCTGGACCTCTCGGAGAACAGCCTCAACGCTAACGACTCC GAGCTCCCGGCCACTGGGTTCGAGCGGCTCACCGAGCTCACCCACCTCAACCTCTCCTAC TCCGACTTCACAGGAAACATACCACGCGGGATACCGCGGCTCAGCAGATTGGCGTCTCTC GACCTGTCAAACTGGATCTATCTCATTGAAGCAGACAACGATTATTCCCTCCCGCTCGGC GCAGGGCGGTGGCCCGTCGTCGAGCCAGACATCGGATCGCTGCTCGCCAACCTCAGCAAC CTGAGAGCGCTCGATCTGGGCAATGTTGACCTGTCCGGCAATGGCGCGGCATGGTGCGAT GGCTTCGCTAGCTCCACTCCTCGGCTCGAGGTTCTCAGGCTGAGGAACACCCACCTCGAT GCTCCGATCTGCGGATCGCTGTCCGCCATTCGCTCCTTGGTCGAGATCAACCTGAAGTTC AACAAATTGCATGGCAGAATTCCGGATTCCTTGGCTGATCTGCCTTCCCTCCGTGTTCTT AGGCTCGCCTACAATCTCCTCGAAGGGCCATTCCCGATGAGGATATTTGGAAGCAAGAAC TTGAGGGTCGTTGATATCAGCTATAATTTCAGACTGTCCGGTGTGCTGCCCGATTTCTCA TCGGGTAGTGCTCTGACTGAGCTGCTCTGTAGCAACACTAACCTGTCTGGTCCCATCCCG AGTTCTGTAAGCAATCTCAAGTCCTTGAAGAATTTGGGTGTTGCAGCAGCTGGTGACAGT CACCAAGAAGAGCTTCCCTCTTCAATTGGTGAGCTCAGGTCCTTAACATCGTTACAGCTT TCTGGGTCTGGCATAGTAGGAGAAATGCCTTCTTGGGTTGCGAATTTGACTTCTTTGGAA ACTCTGCAATTCTCCAACTGTGGCTTATCTGGTCAACTGCCTTCCTTCATAGGCAATCTC AAGAACCTAAGTACCTTAAAATTGTATGCATGCAATTTTTCTGGTCAGGTACCTCCACAT CTTTTTAATCTAACTAATTTGGAAGTCATAAACCTTCATTCCAATGGTTTCATTGGCACA ATCGAACTCAGCTCATTCTTCAAATTGCCCAATCTATCAATACTGAATCTTTCAAACAAC GAACTTTCTGTACAAGTCGGGGAACATAATTCTTCATGGGAATCCATCGATAATTTTGAC ACTCTATGTCTAGCATCTTGTAACATATCCAAGCTCCCCCATACCTTGAGGCACATGCAA TCGGTTCAAGTTCTTGACCTTTCAAGCAACCACATCCATGGCACTATACCTCAGTGGGCA TGGGATAATTGGATCAACTCGCTCATCCTGATGAACTTGTCACACAACCAATTCAGTGGT AGTATAGGATATGGCTCTGTCATTTCAGATGGTATGTTTGTTATTGATATCAGTTATAAC CTATTTGAAGGTCACATACCTGTACCAGGACCACAGACCCAACTGTTTGATTGCTCGAAC AATCGATTTTCATCCATGCCATCCAATTTTGGTTCTAATTTAAGCAGTATTTCCCTTCTC ATGGCTTCCAGCAACAAGCTGTCCGGAGAAATTCCACCATCGATTTGTGAAGCAACAAGC CTTTTGCTCCTTGATCTCTCCAATAATGATTTTCTTGGCTCCATCCCTTCTTGTTTAATG GAGGATATGAGTGACCACCTGAATGTATTAAACTTGAAAGGAAATCAACTTGGTGGAAGA TTGCCAAATAGCCTAAAGCAAGATTGTGCATTTGGGGCATTAGATTTTAGTGACAATCGG ATTGAAGGACTGTTACCCAGATCCCTAGTTGCTTGCAAAGACTTGGAGGCTTTTGATATC AGAAATAATCGTATTGATGATAAATTTCCATGTTGGATGAGTATGCTTCCTAAACTTCAA GTCCTTGTTCTGAAATCCAACAAGTTTGTCGGGAATGTGGGGCCTTCTGTTCCTGGAGAT AAAAATAGTTGTGAGTTTATAAAACTTCGAATTTTTGACTTGGCTTCAAACAATTTCTCT GGACTATTACAAAATGAATGGTTTAGAACAATGAAATCCATGATGACTAAAACAGTCAAT GAGACGCTGGTCATGGAAAATCAATATGATCTACTTGGCCAAACATACCAAATCACCACT GCCATCACATACAAAGGGTCTGATATTACTTTTTCGAAGATATTGAGGACAATTGTAGTC ATTGATGTTTCGGATAATGCGTTCTATGGTGCCATTCCCCAGTCTATTGGGGACCTAGTT CTACTTAGTGGGGTAAACATGTCACATAATGCCCTCACTGGACTGATCCCATCTCAGCTC GGCATGCTACATCAACTCGAGTCGCTCGACCTCTCTTCAAATGATCTTTCAGGAGAGATT CCACAAGAGTTGGCATCACTGGACTTCCTTTCGACGTTGAATATGTCCTACAATAAGTTG GAGGGAAGAATACCCGAGTCTCCCCACTTCTTGACATTCTCTAATCTCTCATTTCTAGGA AACATGGGTCTCTGTGGACTTCAGCTGTCCAAAGCATGCAACAACATATCATCAGATACG GTTCTACATCAATCAGAGAAGGTGTCAATAGACATTGTGTTGTTCCTTTTTGCCGGACTC GGATTTGGTGTTGGATTCGCAATTGCAATTCTCTTAACATGGGGAACCTCAAGGAGCTTG TCCTTAGCTTTACGACTGTCGCAATGA

Peptide Sequence

PEP ID	Os04t0349700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:16667270:16670469:-1 gene:Os04g0349700 transcript:Os04t0349700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, typical subtype containing protein. (Os04t0349700-01)
Sequence	ILFPLRYLDLSENSLNANDSELPATGFERLTELTHLNLSYSDFTGNIPRGIPRLSRLASL DLSNWIYLIEADNDYSLPLGAGRWPVVEPDIGSLLANLSNLRALDLGNVDLSGNGAAWCD GFASSTPRLEVLRLRNTHLDAPICGSLSAIRSLVEINLKFNKLHGRIPDSLADLPSLRVL RLAYNLLEGPFPMRIFGSKNLRVVDISYNFRLSGVLPDFSSGSALTELLCSNTNLSGPIP SSVSNLKSLKNLGVAAAGDSHQEELPSSIGELRSLTSLQLSGSGIVGEMPSWVANLTSLE TLQFSNCGLSGQLPSFIGNLKNLSTLKLYACNFSGQVPPHLFNLTNLEVINLHSNGFIGT IELSSFFKLPNLSILNLSNNELSVQVGEHNSSWESIDNFDTLCLASCNISKLPHTLRHMQ SVQVLDLSSNHIHGTIPQWAWDNWINSLILMNLSHNQFSGSIGYGSVISDGMFVIDISYN LFEGHIPVPGPQTQLFDCSNNRFSSMPSNFGSNLSSISLLMASSNKLSGEIPPSICEATS LLLLDLSNNDFLGSIPSCLMEDMSDHLNVLNLKGNQLGGRLPNSLKQDCAFGALDFSDNR IEGLLPRSLVACKDLEAFDIRNNRIDDKFPCWMSMLPKLQVLVLKSNKFVGNVGPSVPGD KNSCEFIKLRIFDLASNNFSGLLQNEWFRTMKSMMTKTVNETLVMENQYDLLGQTYQITT AITYKGSDITFSKILRTIVVIDVSDNAFYGAIPQSIGDLVLLSGVNMSHNALTGLIPSQL GMLHQLESLDLSSNDLSGEIPQELASLDFLSTLNMSYNKLEGRIPESPHFLTFSNLSFLG NMGLCGLQLSKACNNISSDTVLHQSEKVSIDIVLFLFAGLGFGVGFAIAILLTWGTSRSL SLALRLSQ

Transcript Sequence

Transcript ID	Os04t0349700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:16667270:16670469:-1 gene:Os04g0349700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, typical subtype containing protein. (Os04t0349700-01)
Sequence	AAAATATACTCTTAAATTCTTTTTCCCCTCAGGTACCTGGACCTCTCGGAGAACAGCCTC AACGCTAACGACTCCGAGCTCCCGGCCACTGGGTTCGAGCGGCTCACCGAGCTCACCCAC CTCAACCTCTCCTACTCCGACTTCACAGGAAACATACCACGCGGGATACCGCGGCTCAGC AGATTGGCGTCTCTCGACCTGTCAAACTGGATCTATCTCATTGAAGCAGACAACGATTAT TCCCTCCCGCTCGGCGCAGGGCGGTGGCCCGTCGTCGAGCCAGACATCGGATCGCTGCTC GCCAACCTCAGCAACCTGAGAGCGCTCGATCTGGGCAATGTTGACCTGTCCGGCAATGGC GCGGCATGGTGCGATGGCTTCGCTAGCTCCACTCCTCGGCTCGAGGTTCTCAGGCTGAGG AACACCCACCTCGATGCTCCGATCTGCGGATCGCTGTCCGCCATTCGCTCCTTGGTCGAG ATCAACCTGAAGTTCAACAAATTGCATGGCAGAATTCCGGATTCCTTGGCTGATCTGCCT TCCCTCCGTGTTCTTAGGCTCGCCTACAATCTCCTCGAAGGGCCATTCCCGATGAGGATA TTTGGAAGCAAGAACTTGAGGGTCGTTGATATCAGCTATAATTTCAGACTGTCCGGTGTG CTGCCCGATTTCTCATCGGGTAGTGCTCTGACTGAGCTGCTCTGTAGCAACACTAACCTG TCTGGTCCCATCCCGAGTTCTGTAAGCAATCTCAAGTCCTTGAAGAATTTGGGTGTTGCA GCAGCTGGTGACAGTCACCAAGAAGAGCTTCCCTCTTCAATTGGTGAGCTCAGGTCCTTA ACATCGTTACAGCTTTCTGGGTCTGGCATAGTAGGAGAAATGCCTTCTTGGGTTGCGAAT TTGACTTCTTTGGAAACTCTGCAATTCTCCAACTGTGGCTTATCTGGTCAACTGCCTTCC TTCATAGGCAATCTCAAGAACCTAAGTACCTTAAAATTGTATGCATGCAATTTTTCTGGT CAGGTACCTCCACATCTTTTTAATCTAACTAATTTGGAAGTCATAAACCTTCATTCCAAT GGTTTCATTGGCACAATCGAACTCAGCTCATTCTTCAAATTGCCCAATCTATCAATACTG AATCTTTCAAACAACGAACTTTCTGTACAAGTCGGGGAACATAATTCTTCATGGGAATCC ATCGATAATTTTGACACTCTATGTCTAGCATCTTGTAACATATCCAAGCTCCCCCATACC TTGAGGCACATGCAATCGGTTCAAGTTCTTGACCTTTCAAGCAACCACATCCATGGCACT ATACCTCAGTGGGCATGGGATAATTGGATCAACTCGCTCATCCTGATGAACTTGTCACAC AACCAATTCAGTGGTAGTATAGGATATGGCTCTGTCATTTCAGATGGTATGTTTGTTATT GATATCAGTTATAACCTATTTGAAGGTCACATACCTGTACCAGGACCACAGACCCAACTG TTTGATTGCTCGAACAATCGATTTTCATCCATGCCATCCAATTTTGGTTCTAATTTAAGC AGTATTTCCCTTCTCATGGCTTCCAGCAACAAGCTGTCCGGAGAAATTCCACCATCGATT TGTGAAGCAACAAGCCTTTTGCTCCTTGATCTCTCCAATAATGATTTTCTTGGCTCCATC CCTTCTTGTTTAATGGAGGATATGAGTGACCACCTGAATGTATTAAACTTGAAAGGAAAT CAACTTGGTGGAAGATTGCCAAATAGCCTAAAGCAAGATTGTGCATTTGGGGCATTAGAT TTTAGTGACAATCGGATTGAAGGACTGTTACCCAGATCCCTAGTTGCTTGCAAAGACTTG GAGGCTTTTGATATCAGAAATAATCGTATTGATGATAAATTTCCATGTTGGATGAGTATG CTTCCTAAACTTCAAGTCCTTGTTCTGAAATCCAACAAGTTTGTCGGGAATGTGGGGCCT TCTGTTCCTGGAGATAAAAATAGTTGTGAGTTTATAAAACTTCGAATTTTTGACTTGGCT TCAAACAATTTCTCTGGACTATTACAAAATGAATGGTTTAGAACAATGAAATCCATGATG ACTAAAACAGTCAATGAGACGCTGGTCATGGAAAATCAATATGATCTACTTGGCCAAACA TACCAAATCACCACTGCCATCACATACAAAGGGTCTGATATTACTTTTTCGAAGATATTG AGGACAATTGTAGTCATTGATGTTTCGGATAATGCGTTCTATGGTGCCATTCCCCAGTCT ATTGGGGACCTAGTTCTACTTAGTGGGGTAAACATGTCACATAATGCCCTCACTGGACTG ATCCCATCTCAGCTCGGCATGCTACATCAACTCGAGTCGCTCGACCTCTCTTCAAATGAT CTTTCAGGAGAGATTCCACAAGAGTTGGCATCACTGGACTTCCTTTCGACGTTGAATATG TCCTACAATAAGTTGGAGGGAAGAATACCCGAGTCTCCCCACTTCTTGACATTCTCTAAT CTCTCATTTCTAGGAAACATGGGTCTCTGTGGACTTCAGCTGTCCAAAGCATGCAACAAC ATATCATCAGATACGGTTCTACATCAATCAGAGAAGGTGTCAATAGACATTGTGTTGTTC CTTTTTGCCGGACTCGGATTTGGTGTTGGATTCGCAATTGCAATTCTCTTAACATGGGGA ACCTCAAGGAGCTTGTCCTTAGCTTTACGACTGTCGCAATGAGCTACCAGGGCAATGCTC TGTCTTCCACTCGTCCAGCTACTTCACCTAACCAATTACAGTATCTTAAGAGGGGACACG CAGGAAGTGTCCCTAGCCTAGCTAGCTCAGATAGGTGCCCTCGTGCATCCAAACAACTTA ATTTTGAGTCCTCTTCAACTCAAATTTGTGTGCCTATTTCTTCTTCTTAATAAAGAAACA CCGAGCTTCTGCTAGGTTGAATCTCTTCTTTTTCAAGAGGAGCTAGGCTCACCTTCCCAT CACTCAAGGATCTAAGGTTTGTCCACATTGTTATCTCAGAGTTCACTCTACATTACAGCT TTTCTTTATCTAGGGGTGTGCATTCATTTCAAATAGGGGCTATATATGCTCGACTTTGTA TCTCTCTACCTGAACTAGAGCACCTTATGTTGTCTCTGAATTGTGATTGCCAGAATGGGG AACAACAGCTTGAGAACCTT