Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0348100-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:16567718:16570990:-1 gene:Os04g0348100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0130K07.7 protein. (Os04t0348100-01);Similar to OSIGBa0130K07.7 protein. (Os04t0348100-02)
Sequence	ATGTCGCCGGCGGAGCCCCGGCCGCCCGCCGCCGCCACCCGCAAGCGGAAGAAGCCGCAC AAACCCACCAAAACCCTCGCCAAGAACCCCACCAATCCCGTCTCCACGAAGGCGAAGAAG AAGAAACCGCCGCCGCCCTCCAAGGCGGACCAATCCGCCTCCGCCGCCGCCGCCGGTGGC GTCCTCCTGTCGGCCGAGATGCCCCCTGCGCGGCAGCTCGAGTTCCTCCTCCGCAGCTTC GAGCGCGCCGCCAAGATGCGCCTCTCCCCGCTCGAGCTCGACGCCTACTCCGAGGGATGC ATGGTGCCGCTCGCGGAGGGGGCGAGCCAGGACGTGGAGGGATTCGGTGACCATGTGAAA GGGGCCTTTGGCTCCTCTTGGAAGGAGGAGCTTTGTGAGGGGGAGCTCGATGGCGGCGCC GTGGACGCGGGCAGCCCGGCGCTCCTGGTTATCTGCTCAGCTGCTCTGAGATCGTTGGAG CTTCTTAGGGGTTTAAAGATGTTTACTAAAGAGTGCCGCCCTATTAAGCTCTTTGCTAAG CACATGAAAGTGGAGGAGCAGGTTGCGTTGCTTAAAACTCGAGTTAATATTGCTTGCGGT ACACCAAGCAGGATCAAGAAGCTAATTGACATGGAAGCATTATCTCTGTCACGGGTGAAA CTAGTTGTACTTGACATGCAGAGAGATGCAAAGTCATTTACCTTATTCACGTTGCCACAA GTCAGCAACGAGTTCTGGGACTTATACAAGGGCTATCTCGATCAGAAAGTTCGAGGAGGA GATACAAGATTATGTTTTTATGGTGCTGTCTCTGAGAAAGATGTGAAAAAAGCCCTTCCA TCTGCGGAGTAA

Peptide Sequence

PEP ID	Os04t0348100-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:16567718:16570990:-1 gene:Os04g0348100 transcript:Os04t0348100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0130K07.7 protein. (Os04t0348100-01);Similar to OSIGBa0130K07.7 protein. (Os04t0348100-02)
Sequence	MSPAEPRPPAAATRKRKKPHKPTKTLAKNPTNPVSTKAKKKKPPPPSKADQSASAAAAGG VLLSAEMPPARQLEFLLRSFERAAKMRLSPLELDAYSEGCMVPLAEGASQDVEGFGDHVK GAFGSSWKEELCEGELDGGAVDAGSPALLVICSAALRSLELLRGLKMFTKECRPIKLFAK HMKVEEQVALLKTRVNIACGTPSRIKKLIDMEALSLSRVKLVVLDMQRDAKSFTLFTLPQ VSNEFWDLYKGYLDQKVRGGDTRLCFYGAVSEKDVKKALPSAE

Transcript Sequence

Transcript ID	Os04t0348100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:16567718:16570990:-1 gene:Os04g0348100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0130K07.7 protein. (Os04t0348100-01);Similar to OSIGBa0130K07.7 protein. (Os04t0348100-02)
Sequence	CCCTAACAACAGAACCGCCGCCGCCACGGAACCCACCCACGCCGGAATGTCGCCGGCGGA GCCCCGGCCGCCCGCCGCCGCCACCCGCAAGCGGAAGAAGCCGCACAAACCCACCAAAAC CCTCGCCAAGAACCCCACCAATCCCGTCTCCACGAAGGCGAAGAAGAAGAAACCGCCGCC GCCCTCCAAGGCGGACCAATCCGCCTCCGCCGCCGCCGCCGGTGGCGTCCTCCTGTCGGC CGAGATGCCCCCTGCGCGGCAGCTCGAGTTCCTCCTCCGCAGCTTCGAGCGCGCCGCCAA GATGCGCCTCTCCCCGCTCGAGCTCGACGCCTACTCCGAGGGATGCATGGTGCCGCTCGC GGAGGGGGCGAGCCAGGACGTGGAGGGATTCGGTGACCATGTGAAAGGGGCCTTTGGCTC CTCTTGGAAGGAGGAGCTTTGTGAGGGGGAGCTCGATGGCGGCGCCGTGGACGCGGGCAG CCCGGCGCTCCTGGTTATCTGCTCAGCTGCTCTGAGATCGTTGGAGCTTCTTAGGGGTTT AAAGATGTTTACTAAAGAGTGCCGCCCTATTAAGCTCTTTGCTAAGCACATGAAAGTGGA GGAGCAGGTTGCGTTGCTTAAAACTCGAGTTAATATTGCTTGCGGTACACCAAGCAGGAT CAAGAAGCTAATTGACATGGAAGCATTATCTCTGTCACGGGTGAAACTAGTTGTACTTGA CATGCAGAGAGATGCAAAGTCATTTACCTTATTCACGTTGCCACAAGTCAGCAACGAGTT CTGGGACTTATACAAGGGCTATCTCGATCAGAAAGTTCGAGGAGGAGATACAAGATTATG TTTTTATGGTGCTGTCTCTGAGAAAGATGTGAAAAAAGCCCTTCCATCTGCGGAGTAAAA ATGGCTGATACGATGAATTTGTGTCATGTGCACATTGTAGTCAATGTACTAGATATGTAT TTTTGACATACTAGAAGTTTGTAGAAGCAGGCTGGGCAAGAAAATTTTGGAATTTTGAGT GC