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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0346100-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:16457952:16459772:1 gene:Os04g0346100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S27. (Os04t0346100-01)
Sequence

ATGGTGCTCTCGAACGACATCGACCTGCTTAACCCGCCGGCGGAGCTGGAGAAGCTCAAG
CACAAGAAGAAGCGCCTCGTCCAGTCCCCCAACTCCTTCTTCATGGATGTCAAGTGCCAG
GGCTGCTTCAACATAACGACTGTATTCAGCCACTCCCAGACCGTGGTTGTGTGCCCGGGC
TGCCAGACCGTGCTCTGCCAGCCTACTGGTGGGAAGGCCAGGCTCACGGAGGGCTGCTCC
TTCCGCCGGAAGAGCGACTAG

Peptide Sequence

PEP ID

Os04t0346100-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:16457952:16459772:1 gene:Os04g0346100 transcript:Os04t0346100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S27. (Os04t0346100-01)
Sequence

MVLSNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG
CQTVLCQPTGGKARLTEGCSFRRKSD

Transcript Sequence

Transcript ID

Os04t0346100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:16457952:16459772:1 gene:Os04g0346100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein S27. (Os04t0346100-01)
Sequence

CTCTTCTTCCAGCCCTAGCCCCCCTCCCCCCCGCGCCGCCACCACCTCGCTCTCCGCCGC
CGCCGCCGCCGTCTCCAACTTCAAGATGGTGCTCTCGAACGACATCGACCTGCTTAACCC
GCCGGCGGAGCTGGAGAAGCTCAAGCACAAGAAGAAGCGCCTCGTCCAGTCCCCCAACTC
CTTCTTCATGGATGTCAAGTGCCAGGGCTGCTTCAACATAACGACTGTATTCAGCCACTC
CCAGACCGTGGTTGTGTGCCCGGGCTGCCAGACCGTGCTCTGCCAGCCTACTGGTGGGAA
GGCCAGGCTCACGGAGGGCTGCTCCTTCCGCCGGAAGAGCGACTAGGTTAGGCTGTGTGG
CTTGTTGTTACTGGGACAGAAATGCCCTGCTGAACAATACTATCCCGTTACCCTTCCTGA
TGTGTACTCCATAAATTTTGTTAATTATGCCTACCTGTTTACTGCCCTGCATGATGTAGC
AATGCGTTATGTATCTTGCATTTTGTGCTGGAGAAAGCTACTTCGTATAATGCGTGCCCC
TCCACCTTGTTCAATTCTCTCTGTATCCAAGATTTTGGTTTTTGGTTTTAGCCTTGCGTT
GCTCATGAGACTAATTTGCTTAGCTGCAAAATATTTTGTTACAGTGCCAAGTACCTGGAT
ATATTGTCATGCATTTCCTTCTTAGAATGACATCAAGGGCACAAAGTTTCATGTTACACT
TGTATGATATACAGGTGACATGTTGTACAGATAGGTTTGTTTATCTTATACCATGTAGTT
AGTGATTGGGTTCTGTGTACAGGTAACAGTCTGTAACTTATCACCTTTAATTTCGTCAAT
ACAAATGCTACGTGGTGGGGCTGATTGGTGTTGC