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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0340800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:16099448:16102378:1 gene:Os04g0340800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0340800-01);Conserved hypothetical protein. (Os04t0340800-02)
Sequence

ATGCTGGAGAAGGCAATGAAGAATCTGATGATGATGTTAAAATTAATGTTCGAGAATAAA
GGAAACATGAACCAGAATGATCACATGCAACAAGGGAAGAATAATTCTAATGCTTATAAG
AAACAACAGTGCAACATAGTGGACATTATGGATGCCAATTCATTGGAGATTGGAACTAAT
GTATTCTTGAAAAGCTGGAAAAATCGAAATAAGAATGTGGTTGTTGCTTCAATTGTAAGC
TGTGATCCAACACGCAAAGTTGCAGGTTGA

Peptide Sequence

PEP ID

Os04t0340800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:16099448:16102378:1 gene:Os04g0340800 transcript:Os04t0340800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0340800-01);Conserved hypothetical protein. (Os04t0340800-02)
Sequence

MLEKAMKNLMMMLKLMFENKGNMNQNDHMQQGKNNSNAYKKQQCNIVDIMDANSLEIGTN
VFLKSWKNRNKNVVVASIVSCDPTRKVAG

Transcript Sequence

Transcript ID

Os04t0340800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:16099448:16102378:1 gene:Os04g0340800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0340800-01);Conserved hypothetical protein. (Os04t0340800-02)
Sequence

GTGAAAAACTCTATCTCCTCTCTCTCCATTCTCCAACAAAGAGCTCGTGGGTGGGTTTTC
TTCTCCAACGAAACTCTATCCCCTCTCTTCTTCTCTCTGCACTGCTCCTCCCCTCAGGCC
TAAGCCAGGCACCAATCTGAAGGTTTTGGATCAGATGCAGTGATCAATCCTAGGTGACAG
AGCCTATTAGGCTAGAACAGACCAATAAGCAATCCAATGTGTGATCTTTTTATATTCCTC
TGTCCTGGATGTTGCAATCTAGCCGAATAAACCACTTTTGCTTTTGATCGTTCACTGTCC
ATCTATGCATTTTATCTCCTTGCGTCAAATTAAATTTTGTTCTTTCTATCAATTACTTGT
TTCAAATTGTTGGCCAATTAAAATGGACAAAGGAATTAGTGACTGGCAAATAAATCCAAA
TTGGAATTAGTAAATTTATTGTTCAATTTTTAATGTGTTGACACCTCTATTTGAAAATTG
TTCATTAGCTAACAGAGGTATCTAATAACCTGTAGGCTAGCACCTTTCTCATCAATACAA
ACCATAGTGGTACTTTTTTGGACAACAGTAGAGTAAAATGCCTAAAGTTTTAGCCAATTC
TGAAATTATTCTTCTAGAGCAGTAGAGAAAAGTGGTACTCAGACTGCAATACATAGGTTT
ATGCTATTTTTGTTTTGGTGCAGCAGATATGGCAAGGAGTAGAAGGCGGTGCATTGTTCA
AAGCCATGAGGAATATTTGTCAGAGGAACACATTGCAGAAGAAAATGCCCCTAAACAGCT
TGCCACACCATCTGAAGAGAAACAATATGCAGTGATGTTCAAGAGGGTAATGAAGATACT
GATGACGATGTTGGAGAAGTCAATGAAGATACTGATGACGATGCTAGTATGAATGCTGGA
GAAGGCAATGAAGAATCTGATGATGATGTTAAAATTAATGTTCGAGAATAAAGGAAACAT
GAACCAGAATGATCACATGCAACAAGGGAAGAATAATTCTAATGCTTATAAGAAACAACA
GTGCAACATAGTGGACATTATGGATGCCAATTCATTGGAGATTGGAACTAATGTATTCTT
GAAAAGCTGGAAAAATCGAAATAAGAATGTGGTTGTTGCTTCAATTGTAAGCTGTGATCC
AACACGCAAAGTTGCAGGTTGACAAGATAAATGGATCATGATCTGGGGCAATATGGTTAC
TACAAGGTGGACAACTGTCATCTAAAGATCCCTTGTGAATATGATGATGACTGTAATGTG
GAAGATGGTGGCAATGATAGTGGCAACTTCAGATGCATGTTTTTTTTTCTATAGTTTAGA
TTACATTTGTGCATGATGTTCTGAACAAAATTTAATGTCATGACTTATGAGGATGATTTT
CCATGTAATACAAAAAATTCTCTTTAATT