Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0340300-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:16057969:16068256:-1 gene:Os04g0340300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:terpene synthase 19 description:Terpenoid synthase domain containing protein. (Os04t0340300-01)
Sequence	ATGTCAACTTCCATCCCTCTCCCTTTCTTCTTCTCTCATGGTGTTGTGCATGCTAGGATA GGCCATCGTCCAATCCAGCCATCGGTTGGGCTTCTTTCTGCTGGTGCCCCGGCAAAAGTC TCCTTCCGACGACAAAGCAGTGCGCATCGACATGCTGCACATGTTGTGTCCTCAGAATCA ATCACTCCTGTAAAGGAAGTATCTAGCTTTGAGCCCTCTGTATGGGGGGATTTCTTTATC AACTATGACCCAAAGCCACTACAGAGATCGGAGGATTGGATGATGGAAAAGGCTGATAAA CTAAAACAGGACGTCCGTATACTGTTTGAGACGCACAATGATACAGCCAAGAAAATGCAC TTAGTAGATGCAGTTCAACGTCTTGGAATAGATCACCTTTTCCAAGATGAGATAAACAAT GCAATAAGTGACATCAAAGAAAGTGAATTCACTAGCTCTAGTCTCCACGAGGTTGCTCTC CACTTTCGCTTACTTAGGGAGCATGGCATTTGGGTATCTCCAGATGTATTCGAAAAATTC AAAGGAGAGGATGGGAGGTTCATCAATACAATAGCTGATGAACCAAGGGCATTATTAAGT TTGTACAATGCAGCTCACCTCCTTGTCCATGATGAGCCAGAACTTGAAGAAGCTATGTCT TTTGCAAGGCACCACCTCGAATCAATGAGGGACGGAAGTAGGCTCAAGGCCCCTCTAGAT AATCAAATCAACCGTGCCCTACACTTACCATTACCGAGAACCTACAAGAGAGTTGAAATG TTGCATTACATGCTGGAGTACGGACAGGAGGAAGAATGTATTGTTGTTCTTTTAGATCTT GCAAAGCTGGAATTTAACCTTCTGCAGCATGTCCACTTGAAGGAGCTCAAAGCTTTTTCT CAGTGGTGGAAAGATCTTTATGGATATGTCGAGCTAAGTCATGTTAGAGATCGTGCAGTG GAGTCATATCTTTGGTCCTATGCGCTGTTCTATGAAGAAAACTTAACACTCACACGGATG ATCCTTGCCAAGATAATTGTATTCATTGTCCTTATGGATGACACATATGATGATCATGCC ACCATCGAGGAATGCAGGAAGCTGAATGAAGCCATACAAAGATGGGATGAAAGTGCTATC TCATTACTACCAGAGTACATGAAAAAGTTCTACCGTGCACTGCTGAATTACTTCAGGGAG ACTGAAGCTCAAGTAGAGGCCAGTGACAAATACCGGGTGACCTGCATGAAAAAAGAGTTC CAAAATCTATCCACGTATTACCTGCAAGAATTTGAATGGTTGCATCAAAATTACAAGCCA GCATTTAAGGAGCGGGTTGCTTTGTCAACCCTGTCCAGTACTGTTCCACTACTCTGTGTG ACTGCTGCAGTTGGCCAGGGTGATGCAGTAACGAAGGAATCATTTGAATTGACAACAGTA CGTTCAAGTGCCGTTATAGCTTGTGCAAAGATTATGCGTTTCATGAACGACATTGCTGCA TTCAAGTCTGGAAGAAAGAACAAAGGAGATGCCGCAAACACAGTAGAGTGCTATATCAAT GAGCACAAGGTTACAAGCGAAGTTGCCTTAGACAAGATCGAATCAATGATTGAAAGTGAA TGGAGAACCCTGAATCAGGTTCGTTGTGATCATCAAAAGCAGTTCCATGTGGTGCAACGA GTTATGAATTTGGCCGTAGCAGTGCCATTCTTTTACGATAAGAAGAAAGATGCATATACA TTTTCGAAGTATCATCAGGGAAATGTTGGGAATCTGTTTGTGAATCCTGTCACCCTTTAG

Peptide Sequence

PEP ID	Os04t0340300-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:16057969:16068256:-1 gene:Os04g0340300 transcript:Os04t0340300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:terpene synthase 19 description:Terpenoid synthase domain containing protein. (Os04t0340300-01)
Sequence	MSTSIPLPFFFSHGVVHARIGHRPIQPSVGLLSAGAPAKVSFRRQSSAHRHAAHVVSSES ITPVKEVSSFEPSVWGDFFINYDPKPLQRSEDWMMEKADKLKQDVRILFETHNDTAKKMH LVDAVQRLGIDHLFQDEINNAISDIKESEFTSSSLHEVALHFRLLREHGIWVSPDVFEKF KGEDGRFINTIADEPRALLSLYNAAHLLVHDEPELEEAMSFARHHLESMRDGSRLKAPLD NQINRALHLPLPRTYKRVEMLHYMLEYGQEEECIVVLLDLAKLEFNLLQHVHLKELKAFS QWWKDLYGYVELSHVRDRAVESYLWSYALFYEENLTLTRMILAKIIVFIVLMDDTYDDHA TIEECRKLNEAIQRWDESAISLLPEYMKKFYRALLNYFRETEAQVEASDKYRVTCMKKEF QNLSTYYLQEFEWLHQNYKPAFKERVALSTLSSTVPLLCVTAAVGQGDAVTKESFELTTV RSSAVIACAKIMRFMNDIAAFKSGRKNKGDAANTVECYINEHKVTSEVALDKIESMIESE WRTLNQVRCDHQKQFHVVQRVMNLAVAVPFFYDKKKDAYTFSKYHQGNVGNLFVNPVTL

Transcript Sequence

Transcript ID	Os04t0340300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:16057969:16068256:-1 gene:Os04g0340300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:terpene synthase 19 description:Terpenoid synthase domain containing protein. (Os04t0340300-01)
Sequence	AAAGCAACGATCAGACTACCACACTACAATAGTATCAGTGAACTGCTATTGCCCTCCCAA GGGAAATATACTAGTATGTCAACTTCCATCCCTCTCCCTTTCTTCTTCTCTCATGGTGTT GTGCATGCTAGGATAGGCCATCGTCCAATCCAGCCATCGGTTGGGCTTCTTTCTGCTGGT GCCCCGGCAAAAGTCTCCTTCCGACGACAAAGCAGTGCGCATCGACATGCTGCACATGTT GTGTCCTCAGAATCAATCACTCCTGTAAAGGAAGTATCTAGCTTTGAGCCCTCTGTATGG GGGGATTTCTTTATCAACTATGACCCAAAGCCACTACAGAGATCGGAGGATTGGATGATG GAAAAGGCTGATAAACTAAAACAGGACGTCCGTATACTGTTTGAGACGCACAATGATACA GCCAAGAAAATGCACTTAGTAGATGCAGTTCAACGTCTTGGAATAGATCACCTTTTCCAA GATGAGATAAACAATGCAATAAGTGACATCAAAGAAAGTGAATTCACTAGCTCTAGTCTC CACGAGGTTGCTCTCCACTTTCGCTTACTTAGGGAGCATGGCATTTGGGTATCTCCAGAT GTATTCGAAAAATTCAAAGGAGAGGATGGGAGGTTCATCAATACAATAGCTGATGAACCA AGGGCATTATTAAGTTTGTACAATGCAGCTCACCTCCTTGTCCATGATGAGCCAGAACTT GAAGAAGCTATGTCTTTTGCAAGGCACCACCTCGAATCAATGAGGGACGGAAGTAGGCTC AAGGCCCCTCTAGATAATCAAATCAACCGTGCCCTACACTTACCATTACCGAGAACCTAC AAGAGAGTTGAAATGTTGCATTACATGCTGGAGTACGGACAGGAGGAAGAATGTATTGTT GTTCTTTTAGATCTTGCAAAGCTGGAATTTAACCTTCTGCAGCATGTCCACTTGAAGGAG CTCAAAGCTTTTTCTCAGTGGTGGAAAGATCTTTATGGATATGTCGAGCTAAGTCATGTT AGAGATCGTGCAGTGGAGTCATATCTTTGGTCCTATGCGCTGTTCTATGAAGAAAACTTA ACACTCACACGGATGATCCTTGCCAAGATAATTGTATTCATTGTCCTTATGGATGACACA TATGATGATCATGCCACCATCGAGGAATGCAGGAAGCTGAATGAAGCCATACAAAGATGG GATGAAAGTGCTATCTCATTACTACCAGAGTACATGAAAAAGTTCTACCGTGCACTGCTG AATTACTTCAGGGAGACTGAAGCTCAAGTAGAGGCCAGTGACAAATACCGGGTGACCTGC ATGAAAAAAGAGTTCCAAAATCTATCCACGTATTACCTGCAAGAATTTGAATGGTTGCAT CAAAATTACAAGCCAGCATTTAAGGAGCGGGTTGCTTTGTCAACCCTGTCCAGTACTGTT CCACTACTCTGTGTGACTGCTGCAGTTGGCCAGGGTGATGCAGTAACGAAGGAATCATTT GAATTGACAACAGTACGTTCAAGTGCCGTTATAGCTTGTGCAAAGATTATGCGTTTCATG AACGACATTGCTGCATTCAAGTCTGGAAGAAAGAACAAAGGAGATGCCGCAAACACAGTA GAGTGCTATATCAATGAGCACAAGGTTACAAGCGAAGTTGCCTTAGACAAGATCGAATCA ATGATTGAAAGTGAATGGAGAACCCTGAATCAGGTTCGTTGTGATCATCAAAAGCAGTTC CATGTGGTGCAACGAGTTATGAATTTGGCCGTAGCAGTGCCATTCTTTTACGATAAGAAG AAAGATGCATATACATTTTCGAAGTATCATCAGGGAAATGTTGGGAATCTGTTTGTGAAT CCTGTCACCCTTTAGAACTGAGCTATCAACAATGCAGCAAACTATGTGCTTACACAATGC TTATGTAATTCTATCTCCATCTTAAAATAAGTTCACTTTTGTACATAAATCTGGACATGG TCTATATCCAGACTCATGTATAGAATGAAATTTATTTTGTGATGCAGGTAGCAATTCTTA TGCGTATACTCTATGTGTACGTTGGTAATTAGTAAATAAAGATGGCACCGTCCGAAGTGC ATTGCC