Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0339400-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:16001505:16005150:1 gene:Os04g0339400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aldo-keto reductase description:Aldo/keto reductase family protein. (Os04t0339400-01)
Sequence

ATGGCGGCAGCAGCAGCGACAGCTCCGGCGGCAGCGGTGGTGCGGCGAATGAAGCTGGGG
TCGCAGGGGATGGAGGTGTCGGCGCAGGGGCTGGGCTGCATGGGCATGTCGGCGGTGTAC
GGGGAGCGGAAGCCGGAGGCCGACATGGTGGCGCTCGTCCGCCACGCCGTCGCCGCGGGC
GTCACCTTCCTCGACACCTCCGACGTCTACGGGCCGCACACCAACGAGGTGCTCGTCGGC
AAGGCGGTGGCGGCGGCGGCGGCGACGGAGGAGGAGGTGCAGGTGCAGGTGGCCACCAAG
TTCGGCATCACGCCGGCGTGGGAGGTGCGCGGCGACCCGGCGTACGTGCGGGCGGCGTGC
GAGGGCAGCCTCCGGCGGCTCGGCGTCGGCTGCATCGACCTCTACTACCAGCATCGAATC
GACTCCACGGTGCCCGTTGAGATCACGATGGGTGAGCTGAAGAAGCTGGTTGAAGAAGGC
AAGATCAAATACATTGGATTATCTGAGGCCTCTGCGTCGACGATAAGGAGGGCTCACGTG
GTTCATCCGATCACCGCAGTTCAGATCGAGTGGTCACTGTGGTCAAGGGATGTCGAAGAA
GACATTGTTCCAACTTGCAGAGAACTTGGCATTGGAATTGTGGCGTACAGCCCGCTAGGG
AGAGGGTTCTTCTCCAGTGGAGCTAAACTGGTCGATGAACTTCCTGACGACGATTTCCGC
AAGAGCCTACCTAGATTCCAGCCAGAGAACCTCGAGAAGAACGCGGCGATATTCGAGAAG
GTTAATGCCATGGCAGCGAGAAAGGGATGCACATCGTCGCAGCTCGCACTGGCCTGGGTT
CATCACCAAGGGAGCGATGTCTGTCCCATACCAGGAACCACAAAGATCCACAACTTCGAC
CAGAATGTGGGAGCACTGTCAGTGAAGCTCACACCTGACGAGATGTCTGAACTTGAGTCG
TATGCTTCAGCTGACGTTGTGCAAGGTGACAGGTATCATGGTACTTTTCTGAACACCTGG
AAGAACTCTGAAACTCCTCCGCTGTCATCGTGGAGATCAGGCAATTAA

Peptide Sequence

PEP ID

Os04t0339400-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:16001505:16005150:1 gene:Os04g0339400 transcript:Os04t0339400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aldo-keto reductase description:Aldo/keto reductase family protein. (Os04t0339400-01)
Sequence

MAAAAATAPAAAVVRRMKLGSQGMEVSAQGLGCMGMSAVYGERKPEADMVALVRHAVAAG
VTFLDTSDVYGPHTNEVLVGKAVAAAAATEEEVQVQVATKFGITPAWEVRGDPAYVRAAC
EGSLRRLGVGCIDLYYQHRIDSTVPVEITMGELKKLVEEGKIKYIGLSEASASTIRRAHV
VHPITAVQIEWSLWSRDVEEDIVPTCRELGIGIVAYSPLGRGFFSSGAKLVDELPDDDFR
KSLPRFQPENLEKNAAIFEKVNAMAARKGCTSSQLALAWVHHQGSDVCPIPGTTKIHNFD
QNVGALSVKLTPDEMSELESYASADVVQGDRYHGTFLNTWKNSETPPLSSWRSGN

Transcript Sequence

Transcript ID

Os04t0339400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:16001505:16005150:1 gene:Os04g0339400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aldo-keto reductase description:Aldo/keto reductase family protein. (Os04t0339400-01)
Sequence

GTCTCACTTCACCAGCCGCTCAATCCTCTCCCAAGAATCGATCGGCCGGCCATGGCGGCA
GCAGCAGCGACAGCTCCGGCGGCAGCGGTGGTGCGGCGAATGAAGCTGGGGTCGCAGGGG
ATGGAGGTGTCGGCGCAGGGGCTGGGCTGCATGGGCATGTCGGCGGTGTACGGGGAGCGG
AAGCCGGAGGCCGACATGGTGGCGCTCGTCCGCCACGCCGTCGCCGCGGGCGTCACCTTC
CTCGACACCTCCGACGTCTACGGGCCGCACACCAACGAGGTGCTCGTCGGCAAGGCGGTG
GCGGCGGCGGCGGCGACGGAGGAGGAGGTGCAGGTGCAGGTGGCCACCAAGTTCGGCATC
ACGCCGGCGTGGGAGGTGCGCGGCGACCCGGCGTACGTGCGGGCGGCGTGCGAGGGCAGC
CTCCGGCGGCTCGGCGTCGGCTGCATCGACCTCTACTACCAGCATCGAATCGACTCCACG
GTGCCCGTTGAGATCACGATGGGTGAGCTGAAGAAGCTGGTTGAAGAAGGCAAGATCAAA
TACATTGGATTATCTGAGGCCTCTGCGTCGACGATAAGGAGGGCTCACGTGGTTCATCCG
ATCACCGCAGTTCAGATCGAGTGGTCACTGTGGTCAAGGGATGTCGAAGAAGACATTGTT
CCAACTTGCAGAGAACTTGGCATTGGAATTGTGGCGTACAGCCCGCTAGGGAGAGGGTTC
TTCTCCAGTGGAGCTAAACTGGTCGATGAACTTCCTGACGACGATTTCCGCAAGAGCCTA
CCTAGATTCCAGCCAGAGAACCTCGAGAAGAACGCGGCGATATTCGAGAAGGTTAATGCC
ATGGCAGCGAGAAAGGGATGCACATCGTCGCAGCTCGCACTGGCCTGGGTTCATCACCAA
GGGAGCGATGTCTGTCCCATACCAGGAACCACAAAGATCCACAACTTCGACCAGAATGTG
GGAGCACTGTCAGTGAAGCTCACACCTGACGAGATGTCTGAACTTGAGTCGTATGCTTCA
GCTGACGTTGTGCAAGGTGACAGGTATCATGGTACTTTTCTGAACACCTGGAAGAACTCT
GAAACTCCTCCGCTGTCATCGTGGAGATCAGGCAATTAATTAGTCAGAGAGATTGTCATC
TGCTGGGAGTTTGATGGAGTTTTATTGTCACAAATATAGATAGCTTGGTGTATCAATCAC
ATGTTTATTATGCAAATAAAAGTTTGTATGGATTG