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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0329200-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:15284275:15284960:1 gene:Os04g0329200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen allergen Lol p2 family protein. (Os04t0329200-00)
Sequence

ATGGCCTCCATGTCCTCCTTCCGACTTGCCGTGGCGGTGGCTGCACTATTGGTCATTGGC
TCACATGCCACAGAGCTCACCTTCAAGGTTGCTGAGGGCTCTAGCGCCACTAGTCTAGAG
CTCGTCACCAACGTCGCCATCTCTGAGGTGGAGGTCAAGGAGAAAGGCGGCAAGGACTGG
GTGGGGCTCAAGGAGTCGGGCTCTAACACCTGGACACTCAAAAGTGATGCACCACTCAAG
GGCCCCTTCTCCGTTCGCTTCCTTGTCAAGAACGGTGGCTACCGTGTCGTCGATGATGTC
ATCCCTGAAAGCTTTACTGCCGGCTCTGAATATAAGAGTGGCATCCAACTCTAA

Peptide Sequence

PEP ID

Os04t0329200-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:15284275:15284960:1 gene:Os04g0329200 transcript:Os04t0329200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen allergen Lol p2 family protein. (Os04t0329200-00)
Sequence

MASMSSFRLAVAVAALLVIGSHATELTFKVAEGSSATSLELVTNVAISEVEVKEKGGKDW
VGLKESGSNTWTLKSDAPLKGPFSVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL

Transcript Sequence

Transcript ID

Os04t0329200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:15284275:15284960:1 gene:Os04g0329200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen allergen Lol p2 family protein. (Os04t0329200-00)
Sequence

ATCGATCCATCCCTCTACCAAGCAAGAAACAAGAAACATTACACCAAAAAACTAGCTAGC
TAGCCAATGGCCTCCATGTCCTCCTTCCGACTTGCCGTGGCGGTGGCTGCACTATTGGTC
ATTGGCTCACATGCCACAGAGCTCACCTTCAAGGTTGCTGAGGGCTCTAGCGCCACTAGT
CTAGAGCTCGTCACCAACGTCGCCATCTCTGAGGTGGAGGTCAAGGAGAAAGGCGGCAAG
GACTGGGTGGGGCTCAAGGAGTCGGGCTCTAACACCTGGACACTCAAAAGTGATGCACCA
CTCAAGGGCCCCTTCTCCGTTCGCTTCCTTGTCAAGAACGGTGGCTACCGTGTCGTCGAT
GATGTCATCCCTGAAAGCTTTACTGCCGGCTCTGAATATAAGAGTGGCATCCAACTCTAA
GTAACAGGCGTGCATACTCTTGTGTTGGGTCATATTGGAATTATGAACCTCTAAATAATT
ATGTCTTAAAAGAGATCGCTCCATGTTCGAGCGAACCATTAATTAATTTTCTATTAATTA
ATTTTCTGTGGTTATTTTTTTGTAATGGGCTAGTGGCAAAATAAGGCATACATGTGTACT
CCAAAATATTGCTGTGGAGCTATATGCAAAGCATGGTTTTGAATATATGTTATTTATATA
AGATATATGGGAAAAAGTATATTTGG