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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0328900-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:15269336:15270012:1 gene:Os04g0328900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113K06.3 protein. (Os04t0328900-00)
Sequence

AACATATCGACCAATCCCTCTTCCAGTCAAGAAAAAAGGAAGATTACACCAACAAACAAA
CTAGCTAGCCAATGGCCTCCTTGTCATCTTTTCCGGCTCGCCGTGGCGGTGGCGGCACTA
TTGGTTGTTGGCTCATGTGCCACTGAGCTCACCTTCAAGGTCGCTAAGGGCTCTAGCGCC
AAAAGTCTAGAGCTTGTCACTAATGTTGCCATCTCTAAGGTGGAGGTCAAGGAGAAGGGC
GGCAAGGACTGGGTGGCGCTCAAGGAATCGTCGTCTAACACCTGGACGCTCAAAAGTGAG
TCGCCGCTCAAGGGCCCCTTCTCTGTCCGCTTCCTTGTCAAGAATAGCGGCTACCGTGTC
GTCGACGATATCATCCCTGAAAGCTTTACAGCTGGCTCTGAGTACAAGAGTGGAATCCAA
CTCTAA

Peptide Sequence

PEP ID

Os04t0328900-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:15269336:15270012:1 gene:Os04g0328900 transcript:Os04t0328900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113K06.3 protein. (Os04t0328900-00)
Sequence

NISTNPSSSQEKRKITPTNKLASQWPPCHLFRLAVAVAALLVVGSCATELTFKVAKGSSA
KSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRFLVKNSGYRV
VDDIIPESFTAGSEYKSGIQL

Transcript Sequence

Transcript ID

Os04t0328900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:15269336:15270012:1 gene:Os04g0328900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113K06.3 protein. (Os04t0328900-00)
Sequence

AAACATATCGACCAATCCCTCTTCCAGTCAAGAAAAAAGGAAGATTACACCAACAAACAA
ACTAGCTAGCCAATGGCCTCCTTGTCATCTTTTCCGGCTCGCCGTGGCGGTGGCGGCACT
ATTGGTTGTTGGCTCATGTGCCACTGAGCTCACCTTCAAGGTCGCTAAGGGCTCTAGCGC
CAAAAGTCTAGAGCTTGTCACTAATGTTGCCATCTCTAAGGTGGAGGTCAAGGAGAAGGG
CGGCAAGGACTGGGTGGCGCTCAAGGAATCGTCGTCTAACACCTGGACGCTCAAAAGTGA
GTCGCCGCTCAAGGGCCCCTTCTCTGTCCGCTTCCTTGTCAAGAATAGCGGCTACCGTGT
CGTCGACGATATCATCCCTGAAAGCTTTACAGCTGGCTCTGAGTACAAGAGTGGAATCCA
ACTCTAAGTAACAGACATGTGTACTCTTGTTGGGTCACATGCGAAATATGAACATCTAAA
TAATCCTCTCTTAAAAGAGATCGTGTCATGTTTGAGTGAGCAAATAATTATTATTTTTGG
TTATTTTGTTGTAATAGGCCGATGGCAACATAAGGCATACATGTGTCCTTCCAAAATATT
GCTGCGGAGCTGTATGTGAGCATTGTTTGGAATATATGTCATTTATATAAGATATATGGA
AAAAAGTATATTTGGTC