Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0320200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:14718535:14722074:-1 gene:Os04g0320200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os04t0320200-01)
Sequence	ATGGCGACGCGGGTGAAGGACGTGGCGCGGCGGTCGAGCAAGAAGTACGTCGACGAGGCG CTGTACCGGCGGCTGTTCCGCCGGGGCTCCACGCCGCAGGCCGTGCGGGAGGAGGTGGAC GGCTTCCTCGACAGCCGGAAGCGCGCCTTCAAGTGGGAGGTCGGCGTCTGCGTCCGCCGC CTCCGGAAGCAGGCCCTCTACCGCCCCGCCCTCAAGCTTTCTGAAGTCATGGCAAGAAGA GGCATGAATCCTACAGTCAGTGACCAGGCAATCCGCCTTGATCTCGTTGCCAAATCAAGA GGCATTGCTGCTGCTGAGAAGTACTTCCTGGACCTCCCAGAAACTTCCAAAACTCATCTC ACATATGGTGCTCTTCTTAACTGTTACTGCAAAGACTTAATGACTGAGAAGGCTGAAGCC CTTATGGGAAAAATGAAGGAACTCAACTTTGCTTTCACTGCCATGTGCTATAACAGCTTA ATGACACTATACACGAAAGTCAACCAACATGAGAAGGTCCCTAGTGTCATCCAGGATATG AAAGCCGATGATGTGTTGCCTGATATTTATACCTATAATGTTTGGATGAGGGCGCTTGCA GCTCGTGTAGACATAAAAGGGGTTGAGAGGGTGATTGAAGAGATGAAACGGGATGGTCGT GTTACTCCTGATTGGACAACCTACAGTAACCTGGCTTCTATATATGTTGATGCTGGACTG TTTGAGAAAGCAGAAGCTGCCCTGAAGGAGCTGGAGAAGTGGAACACTAGCAATGATCTT GAAGCATACCAGTTCCTCATTACATTATATGCAAGAACACAAAATTTAGTGGAAGTTCAT CGTGTTTGGCGATCATTGAAGCGGAATCAACCAAGAAGGGCAAACATGAGTTACCTTAAC ATGATTCAAGCCTTGGCAAATTTGAAGGATCTGCCTGGTGCTGAGGCCTGTTTCAAAGAG TGGGAAGCTCAGTACATCAATCCACCTAAGACTAACACAAAGGCCCCTGGGACAGCTGAA ACGTCATCTAATGAATCTGATGTCAAGGCAACCAAGGACAAGGGCACAGATGGGGAATTG AAGCATCCTAAATATGATATCCGGGTTGCAAATGCCATGATCAAAGCATATATTACAGAG GGTATGTTTGACAAAGCTGTTGCTGTCAAGAAGCGTGCCAAGATGCGTGGTGGAAGACTT AACGCTAAGACCTGGGAAATTTTCATGGAACATTATCTCAAGGAAGGGGATCTCAAGATG GTTCACTGGTGCGCTGATCGTGCAATCAAGAAAGGGCACAGCGCTGGTAGGATCTGGGTG CCACCACATGAAGTGACTGAAACCTTGATGGATTACTTTGAGAAGAACAAAGATGTAGAT GGAGCTGAGAAATTTGTCGAGGTATTAAAGAAGGTACAGAAGGATTTGGGCACGGTGGTG TTTGAACCACTGGTTCGCACGTATGCAGCTGCTGGGAAGAAGCTCCCTGGGATGAGGCAC CGCCTTAAGATCGAAAATGTGGAAGTCAGCGAGGAAACCGCCAAGCTGCTTGATTCTGTC TGTATTGATCAATGA

Peptide Sequence

PEP ID	Os04t0320200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:14718535:14722074:-1 gene:Os04g0320200 transcript:Os04t0320200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os04t0320200-01)
Sequence	MATRVKDVARRSSKKYVDEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRR LRKQALYRPALKLSEVMARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHL TYGALLNCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDM KADDVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGL FEKAEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLN MIQALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGEL KHPKYDIRVANAMIKAYITEGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKM VHWCADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVV FEPLVRTYAAAGKKLPGMRHRLKIENVEVSEETAKLLDSVCIDQ

Transcript Sequence

Transcript ID	Os04t0320200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:14718535:14722074:-1 gene:Os04g0320200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os04t0320200-01)
Sequence	TCTCCTCTCCTCGCGACAGCGCCGCCCCAAAAACCCTCAAAACCCCGGCGGCGGCGGCGG CGGCGGCGGAGTAGTCGGCGGCGGCGGCGAGATGGCGACGCGGGTGAAGGACGTGGCGCG GCGGTCGAGCAAGAAGTACGTCGACGAGGCGCTGTACCGGCGGCTGTTCCGCCGGGGCTC CACGCCGCAGGCCGTGCGGGAGGAGGTGGACGGCTTCCTCGACAGCCGGAAGCGCGCCTT CAAGTGGGAGGTCGGCGTCTGCGTCCGCCGCCTCCGGAAGCAGGCCCTCTACCGCCCCGC CCTCAAGCTTTCTGAAGTCATGGCAAGAAGAGGCATGAATCCTACAGTCAGTGACCAGGC AATCCGCCTTGATCTCGTTGCCAAATCAAGAGGCATTGCTGCTGCTGAGAAGTACTTCCT GGACCTCCCAGAAACTTCCAAAACTCATCTCACATATGGTGCTCTTCTTAACTGTTACTG CAAAGACTTAATGACTGAGAAGGCTGAAGCCCTTATGGGAAAAATGAAGGAACTCAACTT TGCTTTCACTGCCATGTGCTATAACAGCTTAATGACACTATACACGAAAGTCAACCAACA TGAGAAGGTCCCTAGTGTCATCCAGGATATGAAAGCCGATGATGTGTTGCCTGATATTTA TACCTATAATGTTTGGATGAGGGCGCTTGCAGCTCGTGTAGACATAAAAGGGGTTGAGAG GGTGATTGAAGAGATGAAACGGGATGGTCGTGTTACTCCTGATTGGACAACCTACAGTAA CCTGGCTTCTATATATGTTGATGCTGGACTGTTTGAGAAAGCAGAAGCTGCCCTGAAGGA GCTGGAGAAGTGGAACACTAGCAATGATCTTGAAGCATACCAGTTCCTCATTACATTATA TGCAAGAACACAAAATTTAGTGGAAGTTCATCGTGTTTGGCGATCATTGAAGCGGAATCA ACCAAGAAGGGCAAACATGAGTTACCTTAACATGATTCAAGCCTTGGCAAATTTGAAGGA TCTGCCTGGTGCTGAGGCCTGTTTCAAAGAGTGGGAAGCTCAGTACATCAATCCACCTAA GACTAACACAAAGGCCCCTGGGACAGCTGAAACGTCATCTAATGAATCTGATGTCAAGGC AACCAAGGACAAGGGCACAGATGGGGAATTGAAGCATCCTAAATATGATATCCGGGTTGC AAATGCCATGATCAAAGCATATATTACAGAGGGTATGTTTGACAAAGCTGTTGCTGTCAA GAAGCGTGCCAAGATGCGTGGTGGAAGACTTAACGCTAAGACCTGGGAAATTTTCATGGA ACATTATCTCAAGGAAGGGGATCTCAAGATGGTTCACTGGTGCGCTGATCGTGCAATCAA GAAAGGGCACAGCGCTGGTAGGATCTGGGTGCCACCACATGAAGTGACTGAAACCTTGAT GGATTACTTTGAGAAGAACAAAGATGTAGATGGAGCTGAGAAATTTGTCGAGGTATTAAA GAAGGTACAGAAGGATTTGGGCACGGTGGTGTTTGAACCACTGGTTCGCACGTATGCAGC TGCTGGGAAGAAGCTCCCTGGGATGAGGCACCGCCTTAAGATCGAAAATGTGGAAGTCAG CGAGGAAACCGCCAAGCTGCTTGATTCTGTCTGTATTGATCAATGAACGTGCCTTAGATT TGGATTATGTAATAACATCAGGATGCATGCAAATTGACATGGTTCTTCTGCAAAACCTGT AATAGTTGCTGTAAGCTGAAATTTAGCACTACATTTACTTTTGTTCCTCGGCTGTTTCGA CCCAGTCCCCAGATGCTGAATGGTTGGTTTGAAATCTTCTTTCAGTTCCCATACCTATGG ACTAATATATGAAGATGAATTTTTG