Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0319600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:14675326:14679021:1 gene:Os04g0319600 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA methyltransferase complex GCD14 subunit domain containing protein. (Os04t0319600-01)
Sequence	ATGATGGTGCCGCTGGATCCGTCATCCAAGCCCACCTCCCAGCGCCGCATCGCGGAGGGG GACACCGTCGTGGTGTACGAGCGCCACGACGCCATGCGCGCCGTCGCCGTGCTCCCGGGG GCCGTGCTCCAGAACCGATTCGGCGTCTTCCGCCACGACGACTGGATCGGCCGCCCCTTC GGCTGCAAGGTCCACAGCGCCGCCTCCGCCGGCGGCGGAGGGGCTCGCGGGGGCAAGGGG AAAGGCGGCGGGTTCGTCCACCTCCTTGCGCCCACCCCTGAGCTGTGGACGCTCGTGCTC AGCCACCGGACGCAGATCCTCTACCTCGCCGACATCAGCCTCGTCGTCTCCTACCTCGAG CTCGTCCCCGGGTGCCTCGTGCTCGAGTCCGGCACCGGGAGCGGCTCCCTCACCACCTCG CTCGCCCGCGCCGTCGCCCCGCACGGCCGCGTCTGCACCTTCGATTTCCACGACCAGAGG GCCGCCTCCGCAAGGGAAGATTTTGAGAGGAATGGCCTGACCAGCATAATCACAGTCGCA GTTCGGGACATACAAGGACAAGGGTTCCCTGAGGAACACACTGGTGCTGCCGATGCTGTG TTCTTGGACTTACCCCAGCCTTGGCTTGCAATACCTTCTGCGGGGACTATGCTAAAGCAA GATGGAGTTTTATGCTCCTTCTCACCCTGCATTGAGCAAGTGCAGCGGGCTTGCGAAGCT ATGAGATCATGTTTCACAGATATTAGAACCTTTGAAATTCTTCTTCGCACCTATGAAGTA CGAGAAGGTGGTTTGAAGGGTGCCACAACCAATGAAGAGTCTAATGCAGTGCCTCTTGCT CAGAAAAAAAGAAAACTTCTTGCTGCTGCAGAAACTTTAGATGTTAAGCAGAATTCTTCT AGTGTTATGGTTAGGCCTTGTAGCACTGCTAGAGGACACACTGGCTACCTGACATTTGCG AGGCTTCGTGTGCATGGAAACTAA

Peptide Sequence

PEP ID	Os04t0319600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:14675326:14679021:1 gene:Os04g0319600 transcript:Os04t0319600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA methyltransferase complex GCD14 subunit domain containing protein. (Os04t0319600-01)
Sequence	MMVPLDPSSKPTSQRRIAEGDTVVVYERHDAMRAVAVLPGAVLQNRFGVFRHDDWIGRPF GCKVHSAASAGGGGARGGKGKGGGFVHLLAPTPELWTLVLSHRTQILYLADISLVVSYLE LVPGCLVLESGTGSGSLTTSLARAVAPHGRVCTFDFHDQRAASAREDFERNGLTSIITVA VRDIQGQGFPEEHTGAADAVFLDLPQPWLAIPSAGTMLKQDGVLCSFSPCIEQVQRACEA MRSCFTDIRTFEILLRTYEVREGGLKGATTNEESNAVPLAQKKRKLLAAAETLDVKQNSS SVMVRPCSTARGHTGYLTFARLRVHGN

Transcript Sequence

Transcript ID	Os04t0319600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:14675326:14679021:1 gene:Os04g0319600 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA methyltransferase complex GCD14 subunit domain containing protein. (Os04t0319600-01)
Sequence	CTCTCTTCTCACCAAATCACCAGTGCCAAACCCTACCTCTCCTCCCTCCTCTGTTTCGGC GGCGCACCAGGCGGCGTGGAGGGCGGACTGGTAGGCGGTGCCGGGCCGGGGGTGGTTCGG CGGAGCGGGTGGCGGCGCCGGGGACGAGCGGCAGGTTTCGGCGGCGGGGCGGGCGGCAGG TGTCGGCGGCGCAGGCGGTGGGTGTCGGCGGCGCGGGCGCTGTCTCCTGGCGGCGCGGGC GGCGACTCCAGGCGACCCCTTCCTCGTACCCCCGATCTCGGAAAAGAGGATTATAAGGTA AAAGCACACACAAATCTAACACCACTACAGCGATAAACCCCCCAAACCCCACCACCACGC CGCCGCCGCCGCCGCCGCCGGAGAAGATGATGGTGCCGCTGGATCCGTCATCCAAGCCCA CCTCCCAGCGCCGCATCGCGGAGGGGGACACCGTCGTGGTGTACGAGCGCCACGACGCCA TGCGCGCCGTCGCCGTGCTCCCGGGGGCCGTGCTCCAGAACCGATTCGGCGTCTTCCGCC ACGACGACTGGATCGGCCGCCCCTTCGGCTGCAAGGTCCACAGCGCCGCCTCCGCCGGCG GCGGAGGGGCTCGCGGGGGCAAGGGGAAAGGCGGCGGGTTCGTCCACCTCCTTGCGCCCA CCCCTGAGCTGTGGACGCTCGTGCTCAGCCACCGGACGCAGATCCTCTACCTCGCCGACA TCAGCCTCGTCGTCTCCTACCTCGAGCTCGTCCCCGGGTGCCTCGTGCTCGAGTCCGGCA CCGGGAGCGGCTCCCTCACCACCTCGCTCGCCCGCGCCGTCGCCCCGCACGGCCGCGTCT GCACCTTCGATTTCCACGACCAGAGGGCCGCCTCCGCAAGGGAAGATTTTGAGAGGAATG GCCTGACCAGCATAATCACAGTCGCAGTTCGGGACATACAAGGACAAGGGTTCCCTGAGG AACACACTGGTGCTGCCGATGCTGTGTTCTTGGACTTACCCCAGCCTTGGCTTGCAATAC CTTCTGCGGGGACTATGCTAAAGCAAGATGGAGTTTTATGCTCCTTCTCACCCTGCATTG AGCAAGTGCAGCGGGCTTGCGAAGCTATGAGATCATGTTTCACAGATATTAGAACCTTTG AAATTCTTCTTCGCACCTATGAAGTACGAGAAGGTGGTTTGAAGGGTGCCACAACCAATG AAGAGTCTAATGCAGTGCCTCTTGCTCAGAAAAAAAGAAAACTTCTTGCTGCTGCAGAAA CTTTAGATGTTAAGCAGAATTCTTCTAGTGTTATGGTTAGGCCTTGTAGCACTGCTAGAG GACACACTGGCTACCTGACATTTGCGAGGCTTCGTGTGCATGGAAACTAAACTGATCCTC CATACAGGGAAACTTGGGGACTCACACGTTCATAATAGAAGGAAATTGAGTGTGCAACCC CATGTTCAGGTATTCTCTCAAGATTGATTTGGAGATGATCATTCTTTTTCTGAAATACTG TTATGGCCATTTGCTGCCATTGCTGATAGTCAACCAGGGTCACCTGTACTGAACTGCATT TACCTGTACGTCGAGCTGTGGGCCTTGCATTTGTTGTAATGGTGTAGAAGTATTTCCCAG AGTTCCTTTTTAGGAGTACTTGAGGAGATATTGGGAGGAGTACTTGAGGAGGTATTGGGA GGTATAAGATGCCATACTTCCTGAAGGACAGTAAAAACGCTCTTGTTTAACCTGGGCAAG TGGGCAGGGCATGTTCGCATTTCACGTCTCCATGCCTTGCGCAAAAAAGAATTCAAATAT CTATCTTTTTT