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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0317500-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:14543677:14544362:-1 gene:Os04g0317500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen allergen Lol p2 family protein. (Os04t0317500-01)
Sequence

ATGGCCTCCATGTCCTCCTTCCGACTTGCCGTGGCGGCGGCTGCACTATTGGTCATTGGC
TCATGTGCCACAGAGCTCACCTTCAAGGTTGCTGAGGGCTCTAGCGCCACTAGTCTGGAG
CTCGTCACCAACGTCGCCATCTCTGAGGTGGAGGTCAAGGAGAAGGGCGGCAAGGACTGG
GTGGGGCTCAAGGAGTCAGGCTCTAACACCTGGACACTCAAAAGTGAAGCACCACTCAAG
GGCCCCTTCTCCGTTCGCTTCCTTGTCAAGAACGGTGGCTACCGTGTCGTCGATGATGTC
ATCCCTGAAAGCTTTACTGCCGGCTCTGAATATAAGAGTGGCATCCAACTCTAA

Peptide Sequence

PEP ID

Os04t0317500-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:14543677:14544362:-1 gene:Os04g0317500 transcript:Os04t0317500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen allergen Lol p2 family protein. (Os04t0317500-01)
Sequence

MASMSSFRLAVAAAALLVIGSCATELTFKVAEGSSATSLELVTNVAISEVEVKEKGGKDW
VGLKESGSNTWTLKSEAPLKGPFSVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL

Transcript Sequence

Transcript ID

Os04t0317500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:14543677:14544362:-1 gene:Os04g0317500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen allergen Lol p2 family protein. (Os04t0317500-01)
Sequence

ATCGATCCATCCCTCTACCAACCAAGAAACAAGAAACATTACACCAAAAAACTAGCTAGC
TAGCCAATGGCCTCCATGTCCTCCTTCCGACTTGCCGTGGCGGCGGCTGCACTATTGGTC
ATTGGCTCATGTGCCACAGAGCTCACCTTCAAGGTTGCTGAGGGCTCTAGCGCCACTAGT
CTGGAGCTCGTCACCAACGTCGCCATCTCTGAGGTGGAGGTCAAGGAGAAGGGCGGCAAG
GACTGGGTGGGGCTCAAGGAGTCAGGCTCTAACACCTGGACACTCAAAAGTGAAGCACCA
CTCAAGGGCCCCTTCTCCGTTCGCTTCCTTGTCAAGAACGGTGGCTACCGTGTCGTCGAT
GATGTCATCCCTGAAAGCTTTACTGCCGGCTCTGAATATAAGAGTGGCATCCAACTCTAA
GTAACAGGCATGCATACTCTTGTGTTGGGTCATATTGGAATTATGAACCTCTAAATAATT
ATGTCTTAAAAGAGATCACTCCATGTTCGAGCGAACCATTAATTAATTTTCTATTAATTA
ATTTTCTGTGGTTATTTTTTTGTAATGGGCTAGTGGCAAAATAAGGCATACATGTGTACT
CCAAAATATTGCTGTGGAGCCATATGCAAAGCATGGTTTTGAATATATGTTATTTATATA
AGATATATGGGAAAAAGTATATTTGG