Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0312100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:14186061:14187787:-1 gene:Os04g0312100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os04t0312100-01)
Sequence	ATGGCGACCACCGCCTCCTCCTCCTCCTCCCTCTCCTTCCTCTCGCCGCAACCCATCCAC CCCCGCCGCGTCCGCCTCCCCAATCCCCCGCCCTCCACCGCCGCGCCGCCCACTCCGACG GCCGTACGCTGCACGCCCGCGCCCGCGGCGGCGCCGTCGGCGGCGTCTGCGGCGTCCGCG AGGTCAATCCCGCCGCCGAAGCTGGTGCGGTGCCCGGCGCTGGACCGCCAGGCGGCGCGC GCCAACCGCCTCCGCTTCGCCCGCAAGCTCCTCGTCCTGCTCCTCTCCAAGCCGCGCCGC TTCCTCCCGCTCCGCGTGCTCCGCCGCTGCCACCGCTACCTCGGCCTCCCGCCGCACCGC CGCCGCCGCCCGCTGGTCCCGTTCGTGCTCCGGTACCCGGCGCTGTTCCGCCTCTTCCAG GCGCCCACGTCGCACCCGCTCTCGCCCAACCTCTCCACCCTCGCCGTCGCGCTCACCCCC GCCGCGGAGGCGCTCGCCGCCGACCTCGCCGCGCTCCGTGGCTCCTCCGAGCTCGCGCCA CGCCTCGCCGCCAAGATGCACCGCCTCCTCCTTCTGGCACCCGGGCGGAGCCTCCTCGTG TCCAAGATTGCTCACCTCGCACCCGATCTCGGCCTCGCCATGGACTTCCGCGCCACGCTC TGCCCGCAGCACCCCGACCTCTTCACCTTCGTGAACACCTCCCACGGCCACGCACTCCAG CTAGTCGATCCCCCGCCGCCACCGCCTCCGCCGCTCCCGCCTTTCCGCCCCGCGGCGCCA TCCGACCGCCTCATTGACCGGCCACGAAGGTTCCCCCACCTCAAGCTCCGGCGAGGGCTC AACCTCCGCCGCGCGCACCGGGATTACCTCTTGCGGTTCCATAGCCTGCCCGAGGTGTCG CCATTCGAGCCACTCGATGAGGGCGCAAGCTTGGAGATGATGGAGCGACGGGCGTGCGCG GTTGTCCGGGAGGTCCTGGCCATGACTGTGGAGAAGAGAACACTGGTGGATCATCTCACA CATTTCAGGCGTGATTTCGGGCTACCGAACCGGCTGCGCGCAATGCTAGTTCGGCACCCA GAGTTGTTCTATGTTAGTGTCAAGGGGTTGCGGCACTCGGTGTTCCTTGTCGAGGCGTTC GACGATGACGGTAGGCTACTTGTGGAGGATGATATGCTTGTTGCGAGGGATCGGCTTGAG GAGCTTGTCCGCGAGGGGAAGCGGATGAGGCGGGCTAAGAAGAAGGGCCTTCTTGCTCTT GCGGATGACAGTGATGAAGATGATGAAGAGGAGGATGGGGAAGAACAGGATTCGGTACAG GTCGATGGTGAATCTTGGGACTTGTTAGAGGATGGTGGCATTGGCGAGGACTGGGAGGAG GTGGGTGATCTTGGTGAGGGGAGCGATGACGATGCTGATGCTGAATTGGATGCGTTGGAG GAGTTTTGGGTGAAGAAAGCTGTGGCCGAGGGGTTGGTTGACACTGGGAGCGAGCTTGAT GCTTGGTGA

Peptide Sequence

PEP ID	Os04t0312100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:14186061:14187787:-1 gene:Os04g0312100 transcript:Os04t0312100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os04t0312100-01)
Sequence	MATTASSSSSLSFLSPQPIHPRRVRLPNPPPSTAAPPTPTAVRCTPAPAAAPSAASAASA RSIPPPKLVRCPALDRQAARANRLRFARKLLVLLLSKPRRFLPLRVLRRCHRYLGLPPHR RRRPLVPFVLRYPALFRLFQAPTSHPLSPNLSTLAVALTPAAEALAADLAALRGSSELAP RLAAKMHRLLLLAPGRSLLVSKIAHLAPDLGLAMDFRATLCPQHPDLFTFVNTSHGHALQ LVDPPPPPPPPLPPFRPAAPSDRLIDRPRRFPHLKLRRGLNLRRAHRDYLLRFHSLPEVS PFEPLDEGASLEMMERRACAVVREVLAMTVEKRTLVDHLTHFRRDFGLPNRLRAMLVRHP ELFYVSVKGLRHSVFLVEAFDDDGRLLVEDDMLVARDRLEELVREGKRMRRAKKKGLLAL ADDSDEDDEEEDGEEQDSVQVDGESWDLLEDGGIGEDWEEVGDLGEGSDDDADAELDALE EFWVKKAVAEGLVDTGSELDAW

Transcript Sequence

Transcript ID	Os04t0312100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:14186061:14187787:-1 gene:Os04g0312100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 domain containing protein. (Os04t0312100-01)
Sequence	CCCACACATTCCCCACAATCCGCTCGCCATGGCGACCACCGCCTCCTCCTCCTCCTCCCT CTCCTTCCTCTCGCCGCAACCCATCCACCCCCGCCGCGTCCGCCTCCCCAATCCCCCGCC CTCCACCGCCGCGCCGCCCACTCCGACGGCCGTACGCTGCACGCCCGCGCCCGCGGCGGC GCCGTCGGCGGCGTCTGCGGCGTCCGCGAGGTCAATCCCGCCGCCGAAGCTGGTGCGGTG CCCGGCGCTGGACCGCCAGGCGGCGCGCGCCAACCGCCTCCGCTTCGCCCGCAAGCTCCT CGTCCTGCTCCTCTCCAAGCCGCGCCGCTTCCTCCCGCTCCGCGTGCTCCGCCGCTGCCA CCGCTACCTCGGCCTCCCGCCGCACCGCCGCCGCCGCCCGCTGGTCCCGTTCGTGCTCCG GTACCCGGCGCTGTTCCGCCTCTTCCAGGCGCCCACGTCGCACCCGCTCTCGCCCAACCT CTCCACCCTCGCCGTCGCGCTCACCCCCGCCGCGGAGGCGCTCGCCGCCGACCTCGCCGC GCTCCGTGGCTCCTCCGAGCTCGCGCCACGCCTCGCCGCCAAGATGCACCGCCTCCTCCT TCTGGCACCCGGGCGGAGCCTCCTCGTGTCCAAGATTGCTCACCTCGCACCCGATCTCGG CCTCGCCATGGACTTCCGCGCCACGCTCTGCCCGCAGCACCCCGACCTCTTCACCTTCGT GAACACCTCCCACGGCCACGCACTCCAGCTAGTCGATCCCCCGCCGCCACCGCCTCCGCC GCTCCCGCCTTTCCGCCCCGCGGCGCCATCCGACCGCCTCATTGACCGGCCACGAAGGTT CCCCCACCTCAAGCTCCGGCGAGGGCTCAACCTCCGCCGCGCGCACCGGGATTACCTCTT GCGGTTCCATAGCCTGCCCGAGGTGTCGCCATTCGAGCCACTCGATGAGGGCGCAAGCTT GGAGATGATGGAGCGACGGGCGTGCGCGGTTGTCCGGGAGGTCCTGGCCATGACTGTGGA GAAGAGAACACTGGTGGATCATCTCACACATTTCAGGCGTGATTTCGGGCTACCGAACCG GCTGCGCGCAATGCTAGTTCGGCACCCAGAGTTGTTCTATGTTAGTGTCAAGGGGTTGCG GCACTCGGTGTTCCTTGTCGAGGCGTTCGACGATGACGGTAGGCTACTTGTGGAGGATGA TATGCTTGTTGCGAGGGATCGGCTTGAGGAGCTTGTCCGCGAGGGGAAGCGGATGAGGCG GGCTAAGAAGAAGGGCCTTCTTGCTCTTGCGGATGACAGTGATGAAGATGATGAAGAGGA GGATGGGGAAGAACAGGATTCGGTACAGGTCGATGGTGAATCTTGGGACTTGTTAGAGGA TGGTGGCATTGGCGAGGACTGGGAGGAGGTGGGTGATCTTGGTGAGGGGAGCGATGACGA TGCTGATGCTGAATTGGATGCGTTGGAGGAGTTTTGGGTGAAGAAAGCTGTGGCCGAGGG GTTGGTTGACACTGGGAGCGAGCTTGATGCTTGGTGAAGCGGACAATGGCAATCTGATGA TCTGGTTTATGAGCATTCAGCCCTGCACGTTTCTGAAGATTTTGCTGACTAAGAATTGCT CAAGTGCATTCTTCCTAGCGATGTACAGAAGCTAGAAACCATTAGCACATAACCTTTTCT TATCTGCTGTAATTCTCTCTCTTACAAAATAAAGGTGTGTTCTTCCT