Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0311400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:14129614:14132120:1 gene:Os04g0311400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine proteinase 1 precursor (EC 3.4.22.-). (Os04t0311400-01);Similar to OSIGBa0130O15.4 protein. (Os04t0311400-02)
Sequence	ACACAAGAAATCTCACCCAAAAAAAAAAAACCAACCAATCAAAAACCAAACCATGGCGCG CCACCGCCACCGCCTCGCCGCCGCCGCGGCGCTCCTCCTCCTCCTCCTCTCCTCCGCCGC CGCGCTGTCGTCATCGGCGGCGGAGGGGGAGGAGGACCCGCTCATCGAGCAGGTGGTCGG CGGCGGGGAGGAGGAGGACGCGCAGCTGGACGCGGAGGCGCACTTCGCGAGCTTCGAGCG GCGGTTCGGGCGGACGTACCGGGACGCCGGCGAGCGCGCGTACCGGATGTCCGTGTTCGC CGCCAACCTCCGCCGCGCGCGGCGGCACCAGCGGCTGGACCCCACCGCGACGCACGGCGT CACCAAGTTCTCCGACCTCACCCCGGGCGAGTTCCGCGACCGCTTCCTCGGCCTCCGCCC CCCATCCTCCCCACCGACGGCCTCCCCGACGACTTCGACTGGCGCGAGCACGGCGCCGTC GGCCCCGTCAAGGACCAGGGTTCGTGCGGATCGTGCTGGTCGTTCAGCACGTCGGGGGCG CTGGAGGGGGCGCACTTCCTCGCCACGGGGAAGCTGGAGGTGCTCAGCGAGCAGCAGATG GTCGACTGCGACCACGAGTGTGATGCATCAGAATCGCGCGCATGCGACTCAGGATGCAAC GGTGGCTTGATGACCACAGCCTTCAGCTACCTCATGAAATCCGGTGGCCTACAGAGCGAG AAAGATTACCCGTACGCTGGACGAGAAAACACCTGCAAGTTCGACAAGTCCAAAATCGTT GCCCAAGTAAAGAACTTCAGTGTGATCTCCGTCAACGAAGATCAAATTGCTGCCAACCTC GTCAAACATGGCCCTCTTGCAATTGCAATCAATGCGGCCTACATGCAGACATACATCGGC GGCGTGTCGTGCCCCTTCATCTGTGGGAGGCACCTTGACCATGGTGTCCTCCTTGTTGGC TACGGATCGGCAGGATACGCACCGATCCGCTTCAAGGAGAAGCCGTACTGGATCATCAAG AACTCGTGGGGCGAGAACTGGGGGGAGAAGGGGTACTACAAGATCTGCAGGGGACCTCAT GACAAGAACAAGTGCGGTGTTGATTCCATGGTCTCCTCAGTGACTGCCATCCATACCTCC AAAAAGGAGGAGTAG

Peptide Sequence

PEP ID	Os04t0311400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:14129614:14132120:1 gene:Os04g0311400 transcript:Os04t0311400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine proteinase 1 precursor (EC 3.4.22.-). (Os04t0311400-01);Similar to OSIGBa0130O15.4 protein. (Os04t0311400-02)
Sequence	TQEISPKKKKPTNQKPNHGAPPPPPRRRRGAPPPPPLLRRRAVVIGGGGGGGPAHRAGGR RRGGGGRAAGRGGALRELRAAVRADVPGRRRARVPDVRVRRQPPPRAAAPAAGPHRDARR HQVLRPHPGRVPRPLPRPPPPILPTDGLPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGA LEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSGCNGGLMTTAFSYLMKSGGLQSE KDYPYAGRENTCKFDKSKIVAQVKNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIG GVSCPFICGRHLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPH DKNKCGVDSMVSSVTAIHTSKKEE

Transcript Sequence

Transcript ID	Os04t0311400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:14129614:14132120:1 gene:Os04g0311400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine proteinase 1 precursor (EC 3.4.22.-). (Os04t0311400-01);Similar to OSIGBa0130O15.4 protein. (Os04t0311400-02)
Sequence	CACACAAGAAATCTCACCCAAAAAAAAAAAACCAACCAATCAAAAACCAAACCATGGCGC GCCACCGCCACCGCCTCGCCGCCGCCGCGGCGCTCCTCCTCCTCCTCCTCTCCTCCGCCG CCGCGCTGTCGTCATCGGCGGCGGAGGGGGAGGAGGACCCGCTCATCGAGCAGGTGGTCG GCGGCGGGGAGGAGGAGGACGCGCAGCTGGACGCGGAGGCGCACTTCGCGAGCTTCGAGC GGCGGTTCGGGCGGACGTACCGGGACGCCGGCGAGCGCGCGTACCGGATGTCCGTGTTCG CCGCCAACCTCCGCCGCGCGCGGCGGCACCAGCGGCTGGACCCCACCGCGACGCACGGCG TCACCAAGTTCTCCGACCTCACCCCGGGCGAGTTCCGCGACCGCTTCCTCGGCCTCCGCC CCCCATCCTCCCCACCGACGGCCTCCCCGACGACTTCGACTGGCGCGAGCACGGCGCCGT CGGCCCCGTCAAGGACCAGGGTTCGTGCGGATCGTGCTGGTCGTTCAGCACGTCGGGGGC GCTGGAGGGGGCGCACTTCCTCGCCACGGGGAAGCTGGAGGTGCTCAGCGAGCAGCAGAT GGTCGACTGCGACCACGAGTGTGATGCATCAGAATCGCGCGCATGCGACTCAGGATGCAA CGGTGGCTTGATGACCACAGCCTTCAGCTACCTCATGAAATCCGGTGGCCTACAGAGCGA GAAAGATTACCCGTACGCTGGACGAGAAAACACCTGCAAGTTCGACAAGTCCAAAATCGT TGCCCAAGTAAAGAACTTCAGTGTGATCTCCGTCAACGAAGATCAAATTGCTGCCAACCT CGTCAAACATGGCCCTCTTGCAATTGCAATCAATGCGGCCTACATGCAGACATACATCGG CGGCGTGTCGTGCCCCTTCATCTGTGGGAGGCACCTTGACCATGGTGTCCTCCTTGTTGG CTACGGATCGGCAGGATACGCACCGATCCGCTTCAAGGAGAAGCCGTACTGGATCATCAA GAACTCGTGGGGCGAGAACTGGGGGGAGAAGGGGTACTACAAGATCTGCAGGGGACCTCA TGACAAGAACAAGTGCGGTGTTGATTCCATGGTCTCCTCAGTGACTGCCATCCATACCTC CAAAAAGGAGGAGTAGGATAGGATTAGTCTCCTCTTTGTCTTTGCATACCACACACTTTG TAATTTGCTCTTTTGTGGTTGAAACTGTTAGTGGTTAGGACCATTCTGTGGTGTTGCTCG ATTGCTATTTATGATCAGCAAAAACTGTGAAAACTTCCTTTACTTGATGTAATAGTACAT ATTTGTTCGGA