Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0310200-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:14040507:14041461:1 gene:Os04g0310200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211A12.13 protein. (Os04t0310200-00)
Sequence

ATGAGCACATTCGGCGTGCCCATCACCGACGAGACGCTGGAGGCGATGTCGCGGTACGCC
GGGAAGAGCATCAGCCAGGTGGACCGCGCGCGGGAGGCGATGCGCCTCATCCACGCCGAG
GGCAAGAACCTGGACGCGCTGCAGCACGCGCTGGGGCTCAAGGCCTCCTACGGCGACGGC
GTCTCCGCCATGGTGCTCGTCTACAACGCCACCGGCGCCGCGCTGGAGCTCGTCGACGGG
GAGGGCGGGTCGATGGACTGGTACGGCTACGTCTACCACGAGCAGCCGCCGGCGTCGTTC
CAGAACGGCCAGTGGCTGGCGTTCCTCCACGCCCACCCGACGGCGCAGTCGATCGGCTGC
GAGGCGGCGCGCGTCTTCCGCGGCCGCGACGTCGACGGCCAGGTCCGGGACTTCATGGTC
GCATGGTCCCTTCCTTGGAGCGCCACGCAGAACTCTGCTTACACCGAGGTACGTGAGAAA
GATCACTTCCCAAATTACTGGGGTTACATCAAAGAAGAGAAACTGGAAAAGGCCGGCAAA
ATCTGCACAGACCAAACCGACAAGAACTGTGCATCAACCGTCAGCGTTGGTGGCTGCACC
TCCAGCGAATTCATCGCGGTTCTGCAGCACAAGTTTGGCCCTCTCCCAGAGGAGTGA

Peptide Sequence

PEP ID

Os04t0310200-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:14040507:14041461:1 gene:Os04g0310200 transcript:Os04t0310200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211A12.13 protein. (Os04t0310200-00)
Sequence

MSTFGVPITDETLEAMSRYAGKSISQVDRAREAMRLIHAEGKNLDALQHALGLKASYGDG
VSAMVLVYNATGAALELVDGEGGSMDWYGYVYHEQPPASFQNGQWLAFLHAHPTAQSIGC
EAARVFRGRDVDGQVRDFMVAWSLPWSATQNSAYTEVREKDHFPNYWGYIKEEKLEKAGK
ICTDQTDKNCASTVSVGGCTSSEFIAVLQHKFGPLPEE

Transcript Sequence

Transcript ID

Os04t0310200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:14040507:14041461:1 gene:Os04g0310200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211A12.13 protein. (Os04t0310200-00)
Sequence

AGCTAGCTTTACAAAGTAACTAAGTATAAAGCATGAGCACATTCGGCGTGCCCATCACCG
ACGAGACGCTGGAGGCGATGTCGCGGTACGCCGGGAAGAGCATCAGCCAGGTGGACCGCG
CGCGGGAGGCGATGCGCCTCATCCACGCCGAGGGCAAGAACCTGGACGCGCTGCAGCACG
CGCTGGGGCTCAAGGCCTCCTACGGCGACGGCGTCTCCGCCATGGTGCTCGTCTACAACG
CCACCGGCGCCGCGCTGGAGCTCGTCGACGGGGAGGGCGGGTCGATGGACTGGTACGGCT
ACGTCTACCACGAGCAGCCGCCGGCGTCGTTCCAGAACGGCCAGTGGCTGGCGTTCCTCC
ACGCCCACCCGACGGCGCAGTCGATCGGCTGCGAGGCGGCGCGCGTCTTCCGCGGCCGCG
ACGTCGACGGCCAGGTCCGGGACTTCATGGTCGCATGGTCCCTTCCTTGGAGCGCCACGC
AGAACTCTGCTTACACCGAGGTACGTGAGAAAGATCACTTCCCAAATTACTGGGGTTACA
TCAAAGAAGAGAAACTGGAAAAGGCCGGCAAAATCTGCACAGACCAAACCGACAAGAACT
GTGCATCAACCGTCAGCGTTGGTGGCTGCACCTCCAGCGAATTCATCGCGGTTCTGCAGC
ACAAGTTTGGCCCTCTCCCAGAGGAGTGA