Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0310100-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:14038897:14040082:-1 gene:Os04g0310100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211A12.12 protein. (Os04t0310100-01)
Sequence

ATGGCGAACTGCTTCGGCGATGTTGTGGACAACTACAAGCTGGACGAGATGGAGAGGTAC
GTGGGGAAGGCCAAGAGGCAGGAGGACCGTGCACGGGAGGCCATGAACCTGGTGAACGAG
GACGGCAAGGACAAGAAGGCGGCCAGCTACGTGCAGGGCGTCAAGGACTGGTACGGCAAC
GGCGAGTCGACGCTGTGCCTCGTCTACAACGCCACCGGCGCCACCCTCCGCCACGTCGCC
GACCACGACTGGTGGGGCTTCATCGGCCGCACCCCGTACCCCACCGAGATCGGCAACGGC
CAGTGGGCGGCGTTCCACCACGTCCACAAGTCCGGCGACTCCTCCGGATCCGAGGCCGCC
GTCGTGTACCGCGGCACCAACGCCGACGGCGTCGAGCGCGACCTGCTCGTCGCCTGGAGC
ACGCCATGGAGCTCTTTCTACCGGAACAAGGCCTACTGCGCTGTTGGAGGTGTGGACAGC
TTCCAAGGTGACTGGGAGCAATTGTACGACAAGGTGAATAACGCAGCTTACACATGCAAT
GCCGACTCGGATGGGTTCAAGATAGATGCCAGTACTGCTACCGGTGACAGCCCCGTCTTC
ACGGCGACCATCAAAATCCATTTCAGTCAATGA

Peptide Sequence

PEP ID

Os04t0310100-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:14038897:14040082:-1 gene:Os04g0310100 transcript:Os04t0310100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211A12.12 protein. (Os04t0310100-01)
Sequence

MANCFGDVVDNYKLDEMERYVGKAKRQEDRAREAMNLVNEDGKDKKAASYVQGVKDWYGN
GESTLCLVYNATGATLRHVADHDWWGFIGRTPYPTEIGNGQWAAFHHVHKSGDSSGSEAA
VVYRGTNADGVERDLLVAWSTPWSSFYRNKAYCAVGGVDSFQGDWEQLYDKVNNAAYTCN
ADSDGFKIDASTATGDSPVFTATIKIHFSQ

Transcript Sequence

Transcript ID

Os04t0310100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:14038897:14040082:-1 gene:Os04g0310100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0211A12.12 protein. (Os04t0310100-01)
Sequence

GTAAGCTAATAGATCGAGCTGGATTAGCTAGATCGACCGTATAAGCTAATAGATCGATCG
ATCGAGAGATGGCGAACTGCTTCGGCGATGTTGTGGACAACTACAAGCTGGACGAGATGG
AGAGGTACGTGGGGAAGGCCAAGAGGCAGGAGGACCGTGCACGGGAGGCCATGAACCTGG
TGAACGAGGACGGCAAGGACAAGAAGGCGGCCAGCTACGTGCAGGGCGTCAAGGACTGGT
ACGGCAACGGCGAGTCGACGCTGTGCCTCGTCTACAACGCCACCGGCGCCACCCTCCGCC
ACGTCGCCGACCACGACTGGTGGGGCTTCATCGGCCGCACCCCGTACCCCACCGAGATCG
GCAACGGCCAGTGGGCGGCGTTCCACCACGTCCACAAGTCCGGCGACTCCTCCGGATCCG
AGGCCGCCGTCGTGTACCGCGGCACCAACGCCGACGGCGTCGAGCGCGACCTGCTCGTCG
CCTGGAGCACGCCATGGAGCTCTTTCTACCGGAACAAGGCCTACTGCGCTGTTGGAGGTG
TGGACAGCTTCCAAGGTGACTGGGAGCAATTGTACGACAAGGTGAATAACGCAGCTTACA
CATGCAATGCCGACTCGGATGGGTTCAAGATAGATGCCAGTACTGCTACCGGTGACAGCC
CCGTCTTCACGGCGACCATCAAAATCCATTTCAGTCAATGAAAAGAAAAACAAGATCGAC
CACATACTTGCATGGCATTCGCTCATGTTGCACGGGGCAGGCCCGCTACATTCTATTGCT
GTATCAGCCAGTCAATGAATGTAATGTTCTTCTCTTTCGCGAAATAATGTAGCTGTTACT
ATCGATCGTGTGAATCGATCATGTACACCAGCTCTCGTTTTATTACATATTATAATAAAT
GCGTTCAGCCATGTAATTTGCAGCATTAAAGC