Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0307200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:13834743:13841242:1 gene:Os04g0307200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C43, ER-resident J-protein 2 description:Similar to Cysteine string protein (CCCS1). (Os04t0307200-01);Similar to OSIGBa0125J07.5 protein. (Os04t0307200-02)
Sequence	ATGGCGGCGGCGGAGGAGAACAGCTCGCTGTTCCTCATATTCATCCTCACCATGATCGCG CTCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAG ACCATCCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTAC AAGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTT ATGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCG TATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGT AGACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTT GTTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTAT GAGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAG TTCTTGTTGAATATGGATGGTGCATCTGGTGGAATAATGCTTCTTGGAATAGTAGGGCTA TGCATACTCTTGCCCTTGATGATAGCAGTTATTTATTTGTCAAGGTCATCAAAGTACACC GGAAATTATGTCATGCATCAAACTCTGTCCACTTATTACTACTTCATGAAGCCTTCACTG GCTCCAAGCAAAGTCATGGATGTCTTCATTAAGGCTGCAGAGTATATGGAGATGCCAGTC CGGCGCAGTGACGATGAACCCTTGCAGAAATTATTTGTAGCTGTTAGGAGTGAATTAAAT CTAGACTTGAAGAATATTAGAACAGAACAAGCTAAATTCTGGAAGCAGCATCCATCTCTA GTGAAGATGGAGCTTTTGATTCAGGCTCACCTCACTGGAGAGTCATTTGCTTTGACACCA GCGTTACTGAAGGATTACAGGCACATGCTTGAACTTGCACCTCGTCTTCTGGATGAACTT GTCAAGATTGCACTACTACCAAGGAGTCCCCATGGTTTTGGATGGCTCAGGCCTGCAATC GGTGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCT AGCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACG GTTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCT GTGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAA GATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACT GAAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTT CACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAG GAAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAG AAGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAG ACCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTC GACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGC ACTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACC AGCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGGGCAGGAACAAGAGGTCATGTGGCTGAA GAAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTAC GACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGT AAGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGAT GATTGA

Peptide Sequence

PEP ID	Os04t0307200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:13834743:13841242:1 gene:Os04g0307200 transcript:Os04t0307200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C43, ER-resident J-protein 2 description:Similar to Cysteine string protein (CCCS1). (Os04t0307200-01);Similar to OSIGBa0125J07.5 protein. (Os04t0307200-02)
Sequence	MAAAEENSSLFLIFILTMIALPLVPYTIMRLCRAANVKAKTIHCRCSGCHRSGKYRKSIY KRISNFSTCSNLTILLLWIVMIFLVYYIKHVSREVQVFEPYSILGLEPGASESDIKKSYR RLSIQYHPDKNPDPEAHKYFVEFISKAYQALTDPVSRENYEKYGHPDGRQGMQMGIALPK FLLNMDGASGGIMLLGIVGLCILLPLMIAVIYLSRSSKYTGNYVMHQTLSTYYYFMKPSL APSKVMDVFIKAAEYMEMPVRRSDDEPLQKLFVAVRSELNLDLKNIRTEQAKFWKQHPSL VKMELLIQAHLTGESFALTPALLKDYRHMLELAPRLLDELVKIALLPRSPHGFGWLRPAI GVIELSQNIIQAVPLSARKASGGNSEGIAPFLQLPHFTETVVKKIARKKIRSFQEFCDMP VEERATLLTQVAGLSDEGAQDVELVLEMIPSIEVDIKCETEGEEGIQEGDVVTMYAWVSL HRRNGLTAALPHAPSFPFHKEENFWLLLADAASNEVWLSQKVSFMDETTAITAASKAIQE TQEALGASAKEIGIAIREAVDRVKKGSRLVMGKFQAPAEGTHNLTSFCLCDAWIGCDTKT SLKLKVLKRSRAGTRGHVAEEGPVAEDGIEEEEEEEEEEYDDYESEYSDDEEDEKSKGKG KVANGVAHQKANSDIDSGSDD

Transcript Sequence

Transcript ID	Os04t0307200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:13834743:13841242:1 gene:Os04g0307200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C43, ER-resident J-protein 2 description:Similar to Cysteine string protein (CCCS1). (Os04t0307200-01);Similar to OSIGBa0125J07.5 protein. (Os04t0307200-02)
Sequence	GATCTCGCCTCGCCTCGCCTCGCCGCGCCGCCGCGCCGCCCCAGATCCGCCCCGCCTCCG GCCATCCCCGCCGCCAGATCCGGTGGGGGAAGCCCCCTCTCTCCGCTCTCGCCCAAGGGG GGGTTGGTTTATCCGGTAGGAGGAGGAGTAGTGAGGTGGTGGTAGTGGTTTAAGCGGCCA TGGCGGCGGCGGAGGAGAACAGCTCGCTGTTCCTCATATTCATCCTCACCATGATCGCGC TCCCCCTCGTGCCCTACACCATCATGCGCCTCTGCCGCGCCGCCAACGTCAAGGCCAAGA CCATCCACTGCCGCTGCTCCGGCTGCCACCGCTCCGGCAAGTACCGCAAGTCGATCTACA AGAGGATATCCAACTTCTCGACATGCAGTAACCTCACCATCCTGCTTCTCTGGATAGTTA TGATCTTCCTTGTATACTACATCAAGCATGTTAGCCGCGAGGTACAAGTGTTTGAGCCGT ATAGCATTCTTGGACTGGAACCAGGTGCATCAGAGTCTGATATCAAGAAATCATACCGTA GACTTTCTATCCAATACCATCCTGATAAAAATCCTGATCCTGAGGCCCACAAGTACTTTG TTGAATTTATATCCAAGGCATATCAGGCTTTAACTGATCCTGTATCTCGTGAAAACTATG AGAAGTATGGTCACCCAGATGGACGCCAGGGGATGCAAATGGGCATTGCTTTGCCCAAGT TCTTGTTGAATATGGATGGTGCATCTGGTGGAATAATGCTTCTTGGAATAGTAGGGCTAT GCATACTCTTGCCCTTGATGATAGCAGTTATTTATTTGTCAAGGTCATCAAAGTACACCG GAAATTATGTCATGCATCAAACTCTGTCCACTTATTACTACTTCATGAAGCCTTCACTGG CTCCAAGCAAAGTCATGGATGTCTTCATTAAGGCTGCAGAGTATATGGAGATGCCAGTCC GGCGCAGTGACGATGAACCCTTGCAGAAATTATTTGTAGCTGTTAGGAGTGAATTAAATC TAGACTTGAAGAATATTAGAACAGAACAAGCTAAATTCTGGAAGCAGCATCCATCTCTAG TGAAGATGGAGCTTTTGATTCAGGCTCACCTCACTGGAGAGTCATTTGCTTTGACACCAG CGTTACTGAAGGATTACAGGCACATGCTTGAACTTGCACCTCGTCTTCTGGATGAACTTG TCAAGATTGCACTACTACCAAGGAGTCCCCATGGTTTTGGATGGCTCAGGCCTGCAATCG GTGTAATTGAGCTTTCCCAAAATATCATCCAGGCTGTCCCTCTCAGTGCACGAAAAGCTA GCGGAGGCAACTCTGAAGGAATAGCACCTTTCTTGCAGCTACCGCATTTTACTGAAACGG TTGTCAAAAAAATTGCTCGCAAGAAAATCCGTTCATTCCAAGAATTCTGTGACATGCCTG TGGAGGAACGCGCCACGTTGCTGACACAGGTTGCTGGGCTTTCTGATGAAGGTGCTCAAG ATGTAGAGCTTGTGCTGGAGATGATTCCTTCTATTGAAGTGGATATTAAATGTGAGACTG AAGGCGAAGAGGGGATTCAAGAGGGTGATGTTGTGACCATGTATGCTTGGGTCTCACTTC ACCGTCGCAATGGCCTAACTGCTGCTCTTCCCCATGCTCCTTCCTTCCCGTTCCACAAGG AAGAGAACTTCTGGTTGCTTCTAGCAGATGCTGCATCGAATGAAGTTTGGTTATCCCAGA AGGTCAGCTTCATGGATGAGACTACCGCTATAACTGCAGCATCAAAAGCTATACAAGAGA CCCAAGAAGCACTAGGTGCAAGTGCAAAGGAAATAGGGATTGCGATTAGAGAGGCAGTCG ACAGGGTGAAGAAAGGCAGTAGGTTGGTAATGGGCAAGTTCCAAGCCCCGGCCGAGGGCA CTCACAACCTGACTTCCTTCTGTTTGTGCGACGCATGGATAGGATGTGACACCAAGACCA GCTTGAAGTTGAAGGTCCTGAAGCGCAGCCGGGCAGGAACAAGAGGTCATGTGGCTGAAG AAGGCCCAGTGGCAGAGGATGGTATTGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGTACG ACGACTACGAGAGCGAGTACAGCGATGACGAGGAGGATGAGAAGAGCAAAGGAAAGGGTA AGGTCGCGAACGGAGTAGCCCACCAAAAGGCAAACTCCGATATAGATTCTGGCAGTGATG ATTGATATAGTACCTTGAGTTGTCCAACCATAGACACTTAACATCGTTGTTTTTGCCCTT TGTGCACCCTGTTGAAACTTGAACATATCAGTTGTCAACTTATAGAGCAATCGGCGATAG CTACCAAAGTTACCATTTTTGTTTAATATTGTTGTGTTGGATGAATGAAAAATAATTG