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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0295100-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:12955765:12957248:-1 gene:Os04g0295100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB1687 (EMBRYO DEFECTIVE 1687); ribonuclease P/ ribonuclease. (Os04t0295100-00)
Sequence

ATGGTTCATTTCAAGAACAGGTACATGGTGATGGAGGTGTTCATCGATACACCAGTCAAG
GGCCAGCCCGACCCTCTCATTCTCACGCAGATCAATATCACCAAAGCTATCAAAGACAGC
ATCCAGCTCAACTTTGGGGAGTGTGGCCTAGCAGCTTGTCTTGGGTCGTTGCAAGGTGTT
TATGAGCTCTGTTCATCTGCAGTGAAGTATGTAAATCCGATAACGAAGCTTTGCGTGATC
CGAGTTTCCCGTGAAGATCACCAGAAAGTGTGGGCTGCTATCACCATGGTGAGGAACATT
GGGAAAATCCCAGTTTCATTCAACCTGCGGGATATGAGTGGAAGTATCAGGGCCTGCAAG
AAGGCTGCGTTGGAGTGTGAAGAAGCTAAGTTCGAGTATTACAAACTGGCTGCTGGTGAT
CGTATCACGCCCAAGTTTGTGGAGACCATGGAGAGCTGCTTTGCCAAGATTAAAGGATTA
GAGAGCTAA

Peptide Sequence

PEP ID

Os04t0295100-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:12955765:12957248:-1 gene:Os04g0295100 transcript:Os04t0295100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB1687 (EMBRYO DEFECTIVE 1687); ribonuclease P/ ribonuclease. (Os04t0295100-00)
Sequence

MVHFKNRYMVMEVFIDTPVKGQPDPLILTQINITKAIKDSIQLNFGECGLAACLGSLQGV
YELCSSAVKYVNPITKLCVIRVSREDHQKVWAAITMVRNIGKIPVSFNLRDMSGSIRACK
KAALECEEAKFEYYKLAAGDRITPKFVETMESCFAKIKGLES

Transcript Sequence

Transcript ID

Os04t0295100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:12955765:12957248:-1 gene:Os04g0295100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB1687 (EMBRYO DEFECTIVE 1687); ribonuclease P/ ribonuclease. (Os04t0295100-00)
Sequence

ATGGTTCATTTCAAGAACAGGTACATGGTGATGGAGGTGTTCATCGATACACCAGTCAAG
GGCCAGCCCGACCCTCTCATTCTCACGCAGATCAATATCACCAAAGCTATCAAAGACAGC
ATCCAGCTCAACTTTGGGGAGTGTGGCCTAGCAGCTTGTCTTGGGTCGTTGCAAGGTGTT
TATGAGCTCTGTTCATCTGCAGTGAAGTATGTAAATCCGATAACGAAGCTTTGCGTGATC
CGAGTTTCCCGTGAAGATCACCAGAAAGTGTGGGCTGCTATCACCATGGTGAGGAACATT
GGGAAAATCCCAGTTTCATTCAACCTGCGGGATATGAGTGGAAGTATCAGGGCCTGCAAG
AAGGCTGCGTTGGAGTGTGAAGAAGCTAAGTTCGAGTATTACAAACTGGCTGCTGGTGAT
CGTATCACGCCCAAGTTTGTGGAGACCATGGAGAGCTGCTTTGCCAAGATTAAAGGATTA
GAGAGCTAA