Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0283800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:12211882:12213339:1 gene:Os04g0283800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Octicosapeptide/Phox/Bem1p domain containing protein. (Os04t0283800-01)
Sequence

ATGGCTCCCGCCGGCGACTACGGCGCCTCGGTGAGCATGATGATCAGCTACGGCGGCGCG
ATCGTCCAGGCCGACGGCAAGGCCAAGGCGGCGTACTACGCCGGCGGAGTCCACCGCATC
GTCAAGGTCGGCATGTCCGAGCGGCTGCCCGGCCTCCGCGCGCGGCTCGCGGCGCTCGCC
GGCTGCGCCGACGTGTTCATCCGCTACGCGCTCCCCGGGGAGGGCCTCGGCGTCATCCGC
GACGTGGCGGACGACGGCGACCTGTGGGGCCTCGTGTCGCTGCTCTTCTACTACAAGGAG
GTGCCCGTGTCGTCCAAGCCCGGCCGCATCAGGGTCTTCCTGTTCGCCGCCGATCACGAC
GCGCCGCCGCACCGAACCGCGTCGGCGCCGTCGTTACCGGTGCTGGTATCTGGAAGTGCC
TCTGCTGCTCCTCCCGTTACACTGGGGTTGCCACGCAGCGCGTCTTCACCGTCGCTGGCG
ACGTCGGGCTCGGGCACCGCCGTGAGGATGAAGGTGAGCTACGGCGGGGAGATCATCCAG
CAGCAGCGCGGCGGATCAGCGGCGGCGTCGTGCTACTACGCCGGGGGAGTTCACCGGATC
GTCAGGGTCGGCCTGTCGGAGCGCCTCGCCGGCCTCCGCGCGAGGCTGGCGGCGCTCGCC
GGCTTCTCCGACTCCGACGACGTCCGCATCCAGTACGCGCTCCCGGGAGAGGAGGGCCTC
CACCTCCACGACGTGGCGAGCGACGGCGACCTGTGGAGCCTCGTGTCGCTGCTCTTCTTC
CACGAGGCGGTGATGGCCTCCAGCAAGCCCAAGCAAGGCCGCATCCGCGTGTTCCTCTTC
GCCGCCCACGACGCCCCGGCGACGTCGTCGACGTCGCCCACCGCGGCGCCGCTCAGGAGG
AGCGCGTCGTCGCCGTTCTTGCCGACATTGGTGGAGGAAGACGAGGACGACGACGACAAC
GACGGCAACACGGACACGGCGGCTGCAACTCAGACGAGCACTAGCCGTGTCACCGCCACC
GTGGGCATGCGGCGGAGCGCCTCGTCGCCGGCGCTGGCGACGACGTCATCGAGCTCGGAC
GCGGCGACTGCCTCGACGTCCGGTGGTGCAACATCCGGTTCATCAGGAGACAGCGACACA
CCGGCGATGACATCTTCCACGGCAGCGGCGGCGGCGGTGCAGTTCGGTCCGGTGGTGCTT
GTGCCGGTGATGGTGGTGTTCCCGGTGATCCCCGTGTACGCGATTGGCGTGGTAGATTAT
CGTAGTGTGCTCCTTGTAGCGTAG

Peptide Sequence

PEP ID

Os04t0283800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:12211882:12213339:1 gene:Os04g0283800 transcript:Os04t0283800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Octicosapeptide/Phox/Bem1p domain containing protein. (Os04t0283800-01)
Sequence

MAPAGDYGASVSMMISYGGAIVQADGKAKAAYYAGGVHRIVKVGMSERLPGLRARLAALA
GCADVFIRYALPGEGLGVIRDVADDGDLWGLVSLLFYYKEVPVSSKPGRIRVFLFAADHD
APPHRTASAPSLPVLVSGSASAAPPVTLGLPRSASSPSLATSGSGTAVRMKVSYGGEIIQ
QQRGGSAAASCYYAGGVHRIVRVGLSERLAGLRARLAALAGFSDSDDVRIQYALPGEEGL
HLHDVASDGDLWSLVSLLFFHEAVMASSKPKQGRIRVFLFAAHDAPATSSTSPTAAPLRR
SASSPFLPTLVEEDEDDDDNDGNTDTAAATQTSTSRVTATVGMRRSASSPALATTSSSSD
AATASTSGGATSGSSGDSDTPAMTSSTAAAAAVQFGPVVLVPVMVVFPVIPVYAIGVVDY
RSVLLVA

Transcript Sequence

Transcript ID

Os04t0283800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:12211882:12213339:1 gene:Os04g0283800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Octicosapeptide/Phox/Bem1p domain containing protein. (Os04t0283800-01)
Sequence

ATCCAACGCATCCATTCCGTCCTCTTCGATTGCTGCTTTCCCGTCGCGACCATGGCTCCC
GCCGGCGACTACGGCGCCTCGGTGAGCATGATGATCAGCTACGGCGGCGCGATCGTCCAG
GCCGACGGCAAGGCCAAGGCGGCGTACTACGCCGGCGGAGTCCACCGCATCGTCAAGGTC
GGCATGTCCGAGCGGCTGCCCGGCCTCCGCGCGCGGCTCGCGGCGCTCGCCGGCTGCGCC
GACGTGTTCATCCGCTACGCGCTCCCCGGGGAGGGCCTCGGCGTCATCCGCGACGTGGCG
GACGACGGCGACCTGTGGGGCCTCGTGTCGCTGCTCTTCTACTACAAGGAGGTGCCCGTG
TCGTCCAAGCCCGGCCGCATCAGGGTCTTCCTGTTCGCCGCCGATCACGACGCGCCGCCG
CACCGAACCGCGTCGGCGCCGTCGTTACCGGTGCTGGTATCTGGAAGTGCCTCTGCTGCT
CCTCCCGTTACACTGGGGTTGCCACGCAGCGCGTCTTCACCGTCGCTGGCGACGTCGGGC
TCGGGCACCGCCGTGAGGATGAAGGTGAGCTACGGCGGGGAGATCATCCAGCAGCAGCGC
GGCGGATCAGCGGCGGCGTCGTGCTACTACGCCGGGGGAGTTCACCGGATCGTCAGGGTC
GGCCTGTCGGAGCGCCTCGCCGGCCTCCGCGCGAGGCTGGCGGCGCTCGCCGGCTTCTCC
GACTCCGACGACGTCCGCATCCAGTACGCGCTCCCGGGAGAGGAGGGCCTCCACCTCCAC
GACGTGGCGAGCGACGGCGACCTGTGGAGCCTCGTGTCGCTGCTCTTCTTCCACGAGGCG
GTGATGGCCTCCAGCAAGCCCAAGCAAGGCCGCATCCGCGTGTTCCTCTTCGCCGCCCAC
GACGCCCCGGCGACGTCGTCGACGTCGCCCACCGCGGCGCCGCTCAGGAGGAGCGCGTCG
TCGCCGTTCTTGCCGACATTGGTGGAGGAAGACGAGGACGACGACGACAACGACGGCAAC
ACGGACACGGCGGCTGCAACTCAGACGAGCACTAGCCGTGTCACCGCCACCGTGGGCATG
CGGCGGAGCGCCTCGTCGCCGGCGCTGGCGACGACGTCATCGAGCTCGGACGCGGCGACT
GCCTCGACGTCCGGTGGTGCAACATCCGGTTCATCAGGAGACAGCGACACACCGGCGATG
ACATCTTCCACGGCAGCGGCGGCGGCGGTGCAGTTCGGTCCGGTGGTGCTTGTGCCGGTG
ATGGTGGTGTTCCCGGTGATCCCCGTGTACGCGATTGGCGTGGTAGATTATCGTAGTGTG
CTCCTTGTAGCGTAGTGAAACGCCTTGTTTCCTACTGCCAATCTGAGCTATGTACTTGTC
TACTTGATTTTGTACAATTCATTCAAGGTTATTATTGTAAACCACATTACCAATGTACTC
ATCGTGTGTTCACTGTTC