Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0282200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:12047171:12048694:1 gene:Os04g0282200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1685 family protein. (Os04t0282200-01)
Sequence

ATGGCAAGCAGCGGCAAGGAGCACCGGCGAGGTGTTCCACGCCCACCGCCGTTGTCGCTC
TACATCGAGAGGGAGCAAGGTGAGGTCATCATGGCTGGTCAGGCGCTGGCGACGACGAGG
ATGCTCCAGCAGGTCGCCACCAGCAGCAGTGGCAAGAAGAGGATACTGTCCAAGCAGCTG
TCCATGAAGGAGACAACCCGGGAGGTCAAGTGGGAGAAGCGGCGCAGGCAGATACACCGG
CAGAGGAGCAGCATGGCCCTTCAGGATGTTGAGGAAGAAGCGAGTGCCAACATGTTCGCC
GCCACCACTGACAGCGAAATGGGCTCCAGCACCGAGCGGGTGCCCAAGAGGCTGACCGAT
GGAGACCTCGATGAGCTGAGGGGATCCATGGAGCTTGGCTTTGGATTCGACGAGGAGAAT
GGTGGGCAGAACCTCTGTGACACGCTCCCTGCCCTCGACCTCTACTTCGCCGTCAACCGG
CAGCTCTCGGAGCCCAAGATGCGTTTGTCCACTAGCTCCTTGCCATCACCGACATCAGCG
ACGTCGTCCTCCTCTACCCTCGGTGGCACATCGAACCCGGGTAGCCCCGTCGCACCTTCT
TCTTTCATGGACTCGTGGAAGATTTGCAGTCCAGGTGACAACCCTCAGCTTGTGAAGACA
AGGCTTAGGCACTGGGCTCAAGTAGTGGCCTGTTCAGTGAAACACTCCAGCTGA

Peptide Sequence

PEP ID

Os04t0282200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:12047171:12048694:1 gene:Os04g0282200 transcript:Os04t0282200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1685 family protein. (Os04t0282200-01)
Sequence

MASSGKEHRRGVPRPPPLSLYIEREQGEVIMAGQALATTRMLQQVATSSSGKKRILSKQL
SMKETTREVKWEKRRRQIHRQRSSMALQDVEEEASANMFAATTDSEMGSSTERVPKRLTD
GDLDELRGSMELGFGFDEENGGQNLCDTLPALDLYFAVNRQLSEPKMRLSTSSLPSPTSA
TSSSSTLGGTSNPGSPVAPSSFMDSWKICSPGDNPQLVKTRLRHWAQVVACSVKHSS

Transcript Sequence

Transcript ID

Os04t0282200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:12047171:12048694:1 gene:Os04g0282200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1685 family protein. (Os04t0282200-01)
Sequence

TTAGATCGTGATAGAGGAATATAACAATCACAGAAGCCATGGCAAGCAGCGGCAAGGAGC
ACCGGCGAGGTGTTCCACGCCCACCGCCGTTGTCGCTCTACATCGAGAGGGAGCAAGGTG
AGGTCATCATGGCTGGTCAGGCGCTGGCGACGACGAGGATGCTCCAGCAGGTCGCCACCA
GCAGCAGTGGCAAGAAGAGGATACTGTCCAAGCAGCTGTCCATGAAGGAGACAACCCGGG
AGGTCAAGTGGGAGAAGCGGCGCAGGCAGATACACCGGCAGAGGAGCAGCATGGCCCTTC
AGGATGTTGAGGAAGAAGCGAGTGCCAACATGTTCGCCGCCACCACTGACAGCGAAATGG
GCTCCAGCACCGAGCGGGTGCCCAAGAGGCTGACCGATGGAGACCTCGATGAGCTGAGGG
GATCCATGGAGCTTGGCTTTGGATTCGACGAGGAGAATGGTGGGCAGAACCTCTGTGACA
CGCTCCCTGCCCTCGACCTCTACTTCGCCGTCAACCGGCAGCTCTCGGAGCCCAAGATGC
GTTTGTCCACTAGCTCCTTGCCATCACCGACATCAGCGACGTCGTCCTCCTCTACCCTCG
GTGGCACATCGAACCCGGGTAGCCCCGTCGCACCTTCTTCTTTCATGGACTCGTGGAAGA
TTTGCAGTCCAGGTGACAACCCTCAGCTTGTGAAGACAAGGCTTAGGCACTGGGCTCAAG
TAGTGGCCTGTTCAGTGAAACACTCCAGCTGATCAGTGCTGTAACAACCATATTCTCCTC
CCAAAAGCCATTAACAATACAATGTTTATATATATATATATATATATATATATATATATA
TATATATATATATATATATATGCATATCCCTGCATGCATTGGTTAGATGGCGAAGGATGA
GAAAATTAAACTTCGATGGTATAAACTGAACGTAACCTTTTTTCCCTCTGATGATGACGC
CCATGGTTGTGTTTGTATATATACAGATTTTAGTATACAAATATGTATGTGTTGGCAAAC
ATTAATGTTCTACATATTGCATATATGTGTCCTGGTTTTGCAAGAATATTTTTCATGCCA
ATTAATCTCTGGCCGATCTCTAATTGATACAAATACAGCCTTCACTAACATAACATGTTG
GTTGATTTCAGTAAAACCATATGGAACAGAACTACAGTTACAGAAACAGAAACCAGAGAC
TATCTTAGTTGTACCAGAGTCACAAATGATTCTATGAGGACTTCATAGAGGTAGAGTGTG
CGTGTGTATTCATAGGAATGAGTGTGAGCGCATTGTGAGCGCCTGTGTTTGTATTTTACT
TATAAAAAAAATTGCTCCAAAATGCATATACATTTTATGTTAATATACTTGGTGAGCTTT
GCCACAAGAGCACTTAAGC