Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0280600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:11911069:11918055:-1 gene:Os04g0280600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 20 description:Arbuscular mycorrhizal (AM)-specific marker, Similar to AB-hydrolase associated lipase region (Os04t0280600-01)
Sequence	ATGCCAGGAGGAGGCAACAGATGCGGTTTGCAGCCAATTAGCCTCCTGCAGGCTCTGGCA ACAATTATCCTCGCCGTCGCAGCAGCAGCAGCTGCAGCATGGCTGGCTCCGATCGCCGGG ACGTCGTCGTCGACGTCGCGTGTGGCGGCGGCCAATGGCACGTGCCAGTCAAGGGTGGCA CCGTTTGGCTACGCGTGTGAAGAGCACACGGTGACGACGGAAGATGGGTACATCCTAAGC CTGCAGAGGATCCCGAGCGGCCGCGGCGAGACGGCAGCCGGCGGCGGCGGCGGAGGCAAG GTGCCGGTGCTTCTGCAGCACGGACTCATGATGGATGGGGTGACTTGGCTTATGAACTCG CCCAATGAGTCGCTAGGATACATTCTAGCGGACAATGGGTACGATGTCTGGATTGCCAAT AGCCGTGGCACCGTCTATAGCCGCCACCACACTTCGCTCGTCTCTAGTGACTCGGTAATA TACGATGGAATAATCTTTATTGGCAAAATTATTTGTGCTAATTATCAACACTATTTGGAT GAGAATGTCATAATTAAATGGGATATAATGTGGTTCCATGTGATATTTTTTATTGCATAC TGGAACTGGTCATGGGACGAGCTGTCCAGCAAGGACCTATCAGCAGTAGTGCAGTACGTG TACAGCCAAGCCGGCCAGCAGAAGATGCACTACGTAGGCCACTCTTTGGGCACGTTGATC GCGTTGGCTGCCCTGAGCGATCAGCAGCAGCAGATCGGGATGCTGCGGTCGGCCGGTCTG CTCAGCCCCATCGCCTTCCTCGACAAGATGTCGTCGCCGCTGGCGCGCGCGGCGGCCGAC GTCTTCTTGGCTGAGGCACTCTACTGGCTGGGGCTCAGTGAGTTCGATCCTACAGGAGAA TACGTTCACAGCTTGGTCACTGACATTTGCAAGCAACCAGGCATCGATTGCTACAATCTG ATGTCAGCATTCACAGGTGACAACTGCTGCCTCGACAACTCCTCTGTTCAGGTCTTCCTT GCCCATGAGCCTCAAGCTACAGCCACCAAGAACATGATCCACCTGGCTCAGATGATTAGA GGAGGCACGATCGCCAAGTACGACTACGGCAATGCCGGCGACAACAGGGAGCACTACGGG CAGGCGACGCCGCCAGCGTACGACGTGACGGCGATCCCGGGCGACTTCCCTCTCTTCCTC AGCTACGGCGGCAGGGACAGCCTCTCCGACGTCCAGGACGTGAGCCGCCTCCTGCGGGCC CTGGGCCAGTCGCACTCGCGCGACGGCGACAAGCTCACCGTGCAGTACCTCGCCGACTAC GCGCACGCCGACTTCGTCATGGCCCGGAACGCCGGGGAGAGGGTGTATGCGCCTCTCATG GCCTTCTTCAAGCTCCAGGAGAAGTGA

Peptide Sequence

PEP ID	Os04t0280600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:11911069:11918055:-1 gene:Os04g0280600 transcript:Os04t0280600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 20 description:Arbuscular mycorrhizal (AM)-specific marker, Similar to AB-hydrolase associated lipase region (Os04t0280600-01)
Sequence	MPGGGNRCGLQPISLLQALATIILAVAAAAAAAWLAPIAGTSSSTSRVAAANGTCQSRVA PFGYACEEHTVTTEDGYILSLQRIPSGRGETAAGGGGGGKVPVLLQHGLMMDGVTWLMNS PNESLGYILADNGYDVWIANSRGTVYSRHHTSLVSSDSVIYDGIIFIGKIICANYQHYLD ENVIIKWDIMWFHVIFFIAYWNWSWDELSSKDLSAVVQYVYSQAGQQKMHYVGHSLGTLI ALAALSDQQQQIGMLRSAGLLSPIAFLDKMSSPLARAAADVFLAEALYWLGLSEFDPTGE YVHSLVTDICKQPGIDCYNLMSAFTGDNCCLDNSSVQVFLAHEPQATATKNMIHLAQMIR GGTIAKYDYGNAGDNREHYGQATPPAYDVTAIPGDFPLFLSYGGRDSLSDVQDVSRLLRA LGQSHSRDGDKLTVQYLADYAHADFVMARNAGERVYAPLMAFFKLQEK

Transcript Sequence

Transcript ID	Os04t0280600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:11911069:11918055:-1 gene:Os04g0280600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 20 description:Arbuscular mycorrhizal (AM)-specific marker, Similar to AB-hydrolase associated lipase region (Os04t0280600-01)
Sequence	ATGCCAGGAGGAGGCAACAGATGCGGTTTGCAGCCAATTAGCCTCCTGCAGGCTCTGGCA ACAATTATCCTCGCCGTCGCAGCAGCAGCAGCTGCAGCATGGCTGGCTCCGATCGCCGGG ACGTCGTCGTCGACGTCGCGTGTGGCGGCGGCCAATGGCACGTGCCAGTCAAGGGTGGCA CCGTTTGGCTACGCGTGTGAAGAGCACACGGTGACGACGGAAGATGGGTACATCCTAAGC CTGCAGAGGATCCCGAGCGGCCGCGGCGAGACGGCAGCCGGCGGCGGCGGCGGAGGCAAG GTGCCGGTGCTTCTGCAGCACGGACTCATGATGGATGGGGTGACTTGGCTTATGAACTCG CCCAATGAGTCGCTAGGATACATTCTAGCGGACAATGGGTACGATGTCTGGATTGCCAAT AGCCGTGGCACCGTCTATAGCCGCCACCACACTTCGCTCGTCTCTAGTGACTCGGTAATA TACGATGGAATAATCTTTATTGGCAAAATTATTTGTGCTAATTATCAACACTATTTGGAT GAGAATGTCATAATTAAATGGGATATAATGTGGTTCCATGTGATATTTTTTATTGCATAC TGGAACTGGTCATGGGACGAGCTGTCCAGCAAGGACCTATCAGCAGTAGTGCAGTACGTG TACAGCCAAGCCGGCCAGCAGAAGATGCACTACGTAGGCCACTCTTTGGGCACGTTGATC GCGTTGGCTGCCCTGAGCGATCAGCAGCAGCAGATCGGGATGCTGCGGTCGGCCGGTCTG CTCAGCCCCATCGCCTTCCTCGACAAGATGTCGTCGCCGCTGGCGCGCGCGGCGGCCGAC GTCTTCTTGGCTGAGGCACTCTACTGGCTGGGGCTCAGTGAGTTCGATCCTACAGGAGAA TACGTTCACAGCTTGGTCACTGACATTTGCAAGCAACCAGGCATCGATTGCTACAATCTG ATGTCAGCATTCACAGGTGACAACTGCTGCCTCGACAACTCCTCTGTTCAGGTCTTCCTT GCCCATGAGCCTCAAGCTACAGCCACCAAGAACATGATCCACCTGGCTCAGATGATTAGA GGAGGCACGATCGCCAAGTACGACTACGGCAATGCCGGCGACAACAGGGAGCACTACGGG CAGGCGACGCCGCCAGCGTACGACGTGACGGCGATCCCGGGCGACTTCCCTCTCTTCCTC AGCTACGGCGGCAGGGACAGCCTCTCCGACGTCCAGGACGTGAGCCGCCTCCTGCGGGCC CTGGGCCAGTCGCACTCGCGCGACGGCGACAAGCTCACCGTGCAGTACCTCGCCGACTAC GCGCACGCCGACTTCGTCATGGCCCGGAACGCCGGGGAGAGGGTGTATGCGCCTCTCATG GCCTTCTTCAAGCTCCAGGAGAAGTGA