Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0266900-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:11026653:11032673:1 gene:Os04g0266900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transketolase C-terminal-like domain containing protein. (Os04t0266900-01)
Sequence

ATGGCGACGGCGACGCAAGCTCCCACCTCGCCCGCCGCCGCGTCCGGGCGTGGCTCCGTT
CTCCCCCTCCTCCGTGGCCGCCCCTCCACCCGCGTCCGCCTCGCCGTTGGCCGGCGACCG
CAGACCGCCCTCCGCGCGCAGCCGCCGGGGGCGGCGGAGGTGGTGGAGCAGTCGGTGAAC
ACCATCCGGTTCCTCGCCGTGGACTCCGTGGAGAAGGCCAAGTCCGGCCACCCGGGACTC
CCCATGGGGTGCGCGCCGCTGGGCCACGTCCTATTCGACGAGTTCCTCCGGTTCAACCCC
AAGAACCCCTACTGGTTCGACCGCGACCGCTTCATCCTCTCCGCCGGCCATGGATGCATG
CTCCAGTACGCACTGCTTCACCTCGCCGGATACGACAGCGTCACGATGGATGATCTGAAA
GCTTTCCGGCAGTGGGGAAGCAGAACTCCTGGTCACCCAGAAAACTTCGAAACACCTGGT
GTTGAAGTCACTACTGGTCCTCTGGGGCAGGGTTTTGCAAATGCTGTTGGCCTAGCGCTT
GCTGAGAAACATCTAGCTGCCCGTTTCAATAAGCCTGATTTGAAAATCGTGGATCATCAC
ACGTATGTTATACTTGGGGATGGCTGCCAAATGGAAGGTGTGTCAAATGAGGCATCCTCC
CTTGCTGGTCACTGGGGTCTCGGGAAACTAATTGCCTTCTACGATGACAATCATATATCA
ATTGATGGTAGCACAGGCATTGCTTTCACTGAAGATGCACTTGCCCGATATGAGGCACTA
GGTTGGCATACTATCTGGGTGAAAAATGGTAACACAGGGTATGATGACATCCGTGCTGCA
ATTAAGGAAGCAAAGGCAGTCAAAGACAAGCCAACTCTTATCAAGGTGACTACTACTATT
GGTTATGGATCCCCAAACAAAGCAAACACTTATAGTGTTCATGGTAGCGCTCTAGGTACC
AAAGAAGTAGAGGCAACCAAAAACAATCTTTCTTGGCATCATGAACCTTTCCATGTTCCT
GATGAGGTGAAAAGGCACTGGAGTCACCATATTGATGAGGGTGCTTCTCTGGAAGCTGAA
TGGAATAAAAAAATTGTTGAATATGAAAAGAAATATCGCCAGGAGGCTGCTGAGTTAAAG
AGCATAATTTCAGGAGAACTGCCTTCCGGGTGGGACAATTCTCTTCCAAAATATACTCCT
GAAAATCCTGCTGATGCTACAAGGAACTTATCTCAACAATGCTTGAATGCTCTTGCTAAA
GCAATACCTGGATTTCTTGGAGGTAGTGCCGATCTCGCAACATCAAATATGACATTACTA
AAAATGTTTGGTGATTTTCAAAAAGACACACCTGAAGAAAGAAACATCCGTTTTGGTGTG
AGAGAGCATGCAATGGGTGCCATTTCCAACGGCATTGCATTGCACAGTCCTGGACTAATA
CCTTACTGTGCAACATTCTTTGTGTTTACTGACTATATGAGAGCTGCCATTCGTCTTTCG
GCCTTATGTGGATCAAGGGTGATCTTTGTAATGACTCATGATTCAATTGGCCTTGGAGAA
GATGGGCCAACACATCAGCCTGTTGAACAGTTATTCAGCCTCCGCGCCATGCCAAACATA
CTAATGCTTCGACCTGCAGATGGAAACGAGACTTCTGGAGCTTACAAGATTGCAGTTCTT
AATAGGCAAAGGCCCTCTGTCCTTGCCCTTTCTAGGCAGAAGCTTCAACAGCTGAAAGGA
ACATCAGCGGAAGGCGTTGCCAAGGGAGGATACATTATTTCTGATAATTCATCAGGAAAC
AAACCAGATATCATTCTCATCGGCACTGGTTCTGAACTTGAGATTGTAGAAAAAGCCGCA
GATGAGCTGAGGAAAGATGGGAAGACTGTACGAGTAGTTTCACTGGTTTGCTGGGAATTG
TTTGAGGAGCAGTCGGAGAAATACAAGGAGAGTGTTTTTCCAAGTGAAGTAACTTCTAGG
ATCAGCGTCGAGGCTGGGGTCACATTTGGATGGGAGAAATATATCGGAGAAAAAGGTAAA
GCTATTGGTGTTGACCGTTTTGGTTCTAGTGCGCCTGCTGGGAAAATATACAAGGAGCTT
GGTTTGACAGTGGAAAATGTCATTGCAACGGCCAAGTCACTGTGA

Peptide Sequence

PEP ID

Os04t0266900-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:11026653:11032673:1 gene:Os04g0266900 transcript:Os04t0266900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transketolase C-terminal-like domain containing protein. (Os04t0266900-01)
Sequence

MATATQAPTSPAAASGRGSVLPLLRGRPSTRVRLAVGRRPQTALRAQPPGAAEVVEQSVN
TIRFLAVDSVEKAKSGHPGLPMGCAPLGHVLFDEFLRFNPKNPYWFDRDRFILSAGHGCM
LQYALLHLAGYDSVTMDDLKAFRQWGSRTPGHPENFETPGVEVTTGPLGQGFANAVGLAL
AEKHLAARFNKPDLKIVDHHTYVILGDGCQMEGVSNEASSLAGHWGLGKLIAFYDDNHIS
IDGSTGIAFTEDALARYEALGWHTIWVKNGNTGYDDIRAAIKEAKAVKDKPTLIKVTTTI
GYGSPNKANTYSVHGSALGTKEVEATKNNLSWHHEPFHVPDEVKRHWSHHIDEGASLEAE
WNKKIVEYEKKYRQEAAELKSIISGELPSGWDNSLPKYTPENPADATRNLSQQCLNALAK
AIPGFLGGSADLATSNMTLLKMFGDFQKDTPEERNIRFGVREHAMGAISNGIALHSPGLI
PYCATFFVFTDYMRAAIRLSALCGSRVIFVMTHDSIGLGEDGPTHQPVEQLFSLRAMPNI
LMLRPADGNETSGAYKIAVLNRQRPSVLALSRQKLQQLKGTSAEGVAKGGYIISDNSSGN
KPDIILIGTGSELEIVEKAADELRKDGKTVRVVSLVCWELFEEQSEKYKESVFPSEVTSR
ISVEAGVTFGWEKYIGEKGKAIGVDRFGSSAPAGKIYKELGLTVENVIATAKSL

Transcript Sequence

Transcript ID

Os04t0266900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:11026653:11032673:1 gene:Os04g0266900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transketolase C-terminal-like domain containing protein. (Os04t0266900-01)
Sequence

ACTCCACACTCCTCGACTTTCGTAGCAGCAAGCCACGCGTGACCGAGAAGCCTCGCGGCC
ATGGCGACGGCGACGCAAGCTCCCACCTCGCCCGCCGCCGCGTCCGGGCGTGGCTCCGTT
CTCCCCCTCCTCCGTGGCCGCCCCTCCACCCGCGTCCGCCTCGCCGTTGGCCGGCGACCG
CAGACCGCCCTCCGCGCGCAGCCGCCGGGGGCGGCGGAGGTGGTGGAGCAGTCGGTGAAC
ACCATCCGGTTCCTCGCCGTGGACTCCGTGGAGAAGGCCAAGTCCGGCCACCCGGGACTC
CCCATGGGGTGCGCGCCGCTGGGCCACGTCCTATTCGACGAGTTCCTCCGGTTCAACCCC
AAGAACCCCTACTGGTTCGACCGCGACCGCTTCATCCTCTCCGCCGGCCATGGATGCATG
CTCCAGTACGCACTGCTTCACCTCGCCGGATACGACAGCGTCACGATGGATGATCTGAAA
GCTTTCCGGCAGTGGGGAAGCAGAACTCCTGGTCACCCAGAAAACTTCGAAACACCTGGT
GTTGAAGTCACTACTGGTCCTCTGGGGCAGGGTTTTGCAAATGCTGTTGGCCTAGCGCTT
GCTGAGAAACATCTAGCTGCCCGTTTCAATAAGCCTGATTTGAAAATCGTGGATCATCAC
ACGTATGTTATACTTGGGGATGGCTGCCAAATGGAAGGTGTGTCAAATGAGGCATCCTCC
CTTGCTGGTCACTGGGGTCTCGGGAAACTAATTGCCTTCTACGATGACAATCATATATCA
ATTGATGGTAGCACAGGCATTGCTTTCACTGAAGATGCACTTGCCCGATATGAGGCACTA
GGTTGGCATACTATCTGGGTGAAAAATGGTAACACAGGGTATGATGACATCCGTGCTGCA
ATTAAGGAAGCAAAGGCAGTCAAAGACAAGCCAACTCTTATCAAGGTGACTACTACTATT
GGTTATGGATCCCCAAACAAAGCAAACACTTATAGTGTTCATGGTAGCGCTCTAGGTACC
AAAGAAGTAGAGGCAACCAAAAACAATCTTTCTTGGCATCATGAACCTTTCCATGTTCCT
GATGAGGTGAAAAGGCACTGGAGTCACCATATTGATGAGGGTGCTTCTCTGGAAGCTGAA
TGGAATAAAAAAATTGTTGAATATGAAAAGAAATATCGCCAGGAGGCTGCTGAGTTAAAG
AGCATAATTTCAGGAGAACTGCCTTCCGGGTGGGACAATTCTCTTCCAAAATATACTCCT
GAAAATCCTGCTGATGCTACAAGGAACTTATCTCAACAATGCTTGAATGCTCTTGCTAAA
GCAATACCTGGATTTCTTGGAGGTAGTGCCGATCTCGCAACATCAAATATGACATTACTA
AAAATGTTTGGTGATTTTCAAAAAGACACACCTGAAGAAAGAAACATCCGTTTTGGTGTG
AGAGAGCATGCAATGGGTGCCATTTCCAACGGCATTGCATTGCACAGTCCTGGACTAATA
CCTTACTGTGCAACATTCTTTGTGTTTACTGACTATATGAGAGCTGCCATTCGTCTTTCG
GCCTTATGTGGATCAAGGGTGATCTTTGTAATGACTCATGATTCAATTGGCCTTGGAGAA
GATGGGCCAACACATCAGCCTGTTGAACAGTTATTCAGCCTCCGCGCCATGCCAAACATA
CTAATGCTTCGACCTGCAGATGGAAACGAGACTTCTGGAGCTTACAAGATTGCAGTTCTT
AATAGGCAAAGGCCCTCTGTCCTTGCCCTTTCTAGGCAGAAGCTTCAACAGCTGAAAGGA
ACATCAGCGGAAGGCGTTGCCAAGGGAGGATACATTATTTCTGATAATTCATCAGGAAAC
AAACCAGATATCATTCTCATCGGCACTGGTTCTGAACTTGAGATTGTAGAAAAAGCCGCA
GATGAGCTGAGGAAAGATGGGAAGACTGTACGAGTAGTTTCACTGGTTTGCTGGGAATTG
TTTGAGGAGCAGTCGGAGAAATACAAGGAGAGTGTTTTTCCAAGTGAAGTAACTTCTAGG
ATCAGCGTCGAGGCTGGGGTCACATTTGGATGGGAGAAATATATCGGAGAAAAAGGTAAA
GCTATTGGTGTTGACCGTTTTGGTTCTAGTGCGCCTGCTGGGAAAATATACAAGGAGCTT
GGTTTGACAGTGGAAAATGTCATTGCAACGGCCAAGTCACTGTGAAGTATCGTTTGCTTT
AATGAGCATATATATAGGAATGCCAGTTTCAATAATATATTGGATTTGAATAAAGCGGCA
GGCTTTCAAGTAGTTTGTGCTTGAGGAGTCCGTGTTTAGGCTTTCTGAGTGTAAGGCACT
TTTTTTTTGAACGAACCAGTCAGTGTAAGGCACTTTACATGCTGTTTCAATTCACTCTTG
AATTTTGCCGTCGCACTTGGGAGCATTGAGAGTTTATTAGTCGGGGCCGGCCCATGAACT
GCCATTACTATGTTGTTGCAGAATAAAATGTTGATGGCATTATCAGATTCATTATCGGCT
TTTTATCAAGTTATAATGGTATGGTTCTGATTTTTCC