Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0254000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:10061764:10065209:1 gene:Os04g0254000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrodipicolinate synthase 1, chloroplast precursor (EC 4.2.1.52) (DHDPS 1). (Os04t0254000-01)
Sequence	ATGGCGTCGCTGCTGATCGCCAGCACGGGGGGCGCCCACCGCCTCGCGTGGAAGGACGCC GCCGCCCTGGGACCCGCTCCGCGGCTGGCGCGACCTTGGCCCGCCGCCGTGGCTGCACCG GCGCCGCTGCTCAGGATTAGCAGAGGAAAGTTTGCATTGCAGGCCATCACCCTTGATGAT TATCTTCCAATGCGAAGTACTGAAGTGAAAAATCGGACATCAACAGCTGATATCACTAGT CTCAGAGTAATTACAGCGGTCAAAACCCCATATCTGCCTGATGGAAGATTTGATCTTGAA GCATATGATTCACTGATAAATATGCAGATAGATGGTGGTGCTGAAGGTGTAATAGTTGGA GGAACAACAGGAGAGGGCCACCTTATGAGCTGGGATGAACACATCATGCTTATTGGACAT ACTGTTAACTGCTTTGGTGCTAAAGTTAAAGTGGTAGGCAACACAGGTAGTAACTCAACA AGAGAGGCTATTCATGCAACAGAGCAGGGATTTGCTGTAGGTATGCATGCGGCTCTCCAT ATCAATCCTTACTATGGGAAGACCTCTATCGAAGGGTTGATATCTCATTTTGAGGCTGTC CTCCCAATGGGTCCAACCATTATTTACAATGTTCCATCTAGGACTGGCCAGGATATTCCT CCTGCAGTTATTGAGGCTGTTTCAAGTTTCACAAACTTGGCAGGTGTGAAAGAATGTGTT GGACATGAGAGGGTTAAGTGCTACACTGACAAAGGTATAACCATATGGAGTGGTAATGAT GATGAATGCCATGATTCTAGGTGGAAATATGGTGCCACTGGAGTTATTTCTGTGGCTAGC AACCTTATTCCTGGTCTCATGCACGATCTCATGTATGAAGGGGAGAATAAGACGCTAAAT GAGAAGCTCTTTCCCCTGATGAAATGGTTGTTTTGCCAGCCAAATCCAATTGCTCTCAAC ACTGCCCTGGCTCAGCTTGGAGTGGTAAGGCCTGTTTTCAGATTACCATATGTACCTCTT CCTCTTGAAAAGAGGGTAGAGTTTGTCCGAATCGTTGAATCTATTGGACGGGAAAACTTT GTGGGTGAGAACGAGGCACGGGTTCTTGACGACGATGATTTTGTGTTGGTCAGTAGGTAC TAA

Peptide Sequence

PEP ID	Os04t0254000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:10061764:10065209:1 gene:Os04g0254000 transcript:Os04t0254000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrodipicolinate synthase 1, chloroplast precursor (EC 4.2.1.52) (DHDPS 1). (Os04t0254000-01)
Sequence	MASLLIASTGGAHRLAWKDAAALGPAPRLARPWPAAVAAPAPLLRISRGKFALQAITLDD YLPMRSTEVKNRTSTADITSLRVITAVKTPYLPDGRFDLEAYDSLINMQIDGGAEGVIVG GTTGEGHLMSWDEHIMLIGHTVNCFGAKVKVVGNTGSNSTREAIHATEQGFAVGMHAALH INPYYGKTSIEGLISHFEAVLPMGPTIIYNVPSRTGQDIPPAVIEAVSSFTNLAGVKECV GHERVKCYTDKGITIWSGNDDECHDSRWKYGATGVISVASNLIPGLMHDLMYEGENKTLN EKLFPLMKWLFCQPNPIALNTALAQLGVVRPVFRLPYVPLPLEKRVEFVRIVESIGRENF VGENEARVLDDDDFVLVSRY

Transcript Sequence

Transcript ID	Os04t0254000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:10061764:10065209:1 gene:Os04g0254000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrodipicolinate synthase 1, chloroplast precursor (EC 4.2.1.52) (DHDPS 1). (Os04t0254000-01)
Sequence	AGTAGTCCAGTACGATCACAAGTCCGACCTAAACTGCTAAACAAATCTTGCGCACCGCTT ATTGCCGCCGCGGCGCATCCCCCATCCCCCATCCCCTCTGCACTCTCCCCTCTCCCCACA GCGAGACGCCAAAACCCTAGTCCGTTCTTTCTCCACGGAGGCGAGGATGGCGTCGCTGCT GATCGCCAGCACGGGGGGCGCCCACCGCCTCGCGTGGAAGGACGCCGCCGCCCTGGGACC CGCTCCGCGGCTGGCGCGACCTTGGCCCGCCGCCGTGGCTGCACCGGCGCCGCTGCTCAG GATTAGCAGAGGAAAGTTTGCATTGCAGGCCATCACCCTTGATGATTATCTTCCAATGCG AAGTACTGAAGTGAAAAATCGGACATCAACAGCTGATATCACTAGTCTCAGAGTAATTAC AGCGGTCAAAACCCCATATCTGCCTGATGGAAGATTTGATCTTGAAGCATATGATTCACT GATAAATATGCAGATAGATGGTGGTGCTGAAGGTGTAATAGTTGGAGGAACAACAGGAGA GGGCCACCTTATGAGCTGGGATGAACACATCATGCTTATTGGACATACTGTTAACTGCTT TGGTGCTAAAGTTAAAGTGGTAGGCAACACAGGTAGTAACTCAACAAGAGAGGCTATTCA TGCAACAGAGCAGGGATTTGCTGTAGGTATGCATGCGGCTCTCCATATCAATCCTTACTA TGGGAAGACCTCTATCGAAGGGTTGATATCTCATTTTGAGGCTGTCCTCCCAATGGGTCC AACCATTATTTACAATGTTCCATCTAGGACTGGCCAGGATATTCCTCCTGCAGTTATTGA GGCTGTTTCAAGTTTCACAAACTTGGCAGGTGTGAAAGAATGTGTTGGACATGAGAGGGT TAAGTGCTACACTGACAAAGGTATAACCATATGGAGTGGTAATGATGATGAATGCCATGA TTCTAGGTGGAAATATGGTGCCACTGGAGTTATTTCTGTGGCTAGCAACCTTATTCCTGG TCTCATGCACGATCTCATGTATGAAGGGGAGAATAAGACGCTAAATGAGAAGCTCTTTCC CCTGATGAAATGGTTGTTTTGCCAGCCAAATCCAATTGCTCTCAACACTGCCCTGGCTCA GCTTGGAGTGGTAAGGCCTGTTTTCAGATTACCATATGTACCTCTTCCTCTTGAAAAGAG GGTAGAGTTTGTCCGAATCGTTGAATCTATTGGACGGGAAAACTTTGTGGGTGAGAACGA GGCACGGGTTCTTGACGACGATGATTTTGTGTTGGTCAGTAGGTACTAATAAGTGAATTA TGCAAGTCCCATGTACGTTGATGAACATCGTTTAGTTACATTATGATAGTTTGCAGTCTT CCTTGTAGACATTTCAGCACTTTTTGATCACGCTTGATCGGTTATCAGTGTAATGGGAAT CGTAATCGGGCTTATTTGTACCTTAAATGATAGGTATATTGAGAATAAGCTAAGAGATCA TGTACATTATCCTTATTCGGAAATGCCCTATACCCTTGTACCATTTGTATATGCACCCGT TTCTGGTTGTGATAAGGGTGTCGCCTACCGGCGGTTACTGCGTGGTAATTGAGTTTATTG TGGGG