Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0227500-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:8528512:8533136:1 gene:Os04g0227500 gene_biotype:protein_coding transcript_biotype:protein_coding description:DSBA oxidoreductase family protein. (Os04t0227500-01)
Sequence

ATGGAGGCCAGACACCGTGTGATGTCGCTGCTGCTGGTGCTGGTGATCGGCTGCTGCGCC
TGGGGCTGCCGCCCTGGCGCGGCGCAGGTGCCCGTCCCGGCGAGGACGGACGGGTTCGTG
TACGGTGGGAAGGCGCCGGCGCTGGGGGAGACGGTGGTGGTGGAGGCGTACTTCGACCCC
GTCTGCCCGGACAGCCGCGACGCGTGGCCGGAGCTGAAGAAGGCGGTCGAGCACTACGCC
TCGCGGGTGACCGTCGTCGTGCACCTCTTCCCACTACCTTATCACAGCAATGCCTTCATT
TCCTGCCGGTCAATTCATGCCGTGAACAAGATAAATCCGTCGTTTGTGTATCCCCTGCTC
GAGAGATTCTTCAAGTACCAGGAGGGTTATTACAACCAGCCAACGTATGGGAAAACAAGA
GCTACAGTGGATGCAGAGGTAGCTAAAAACCTTGTTGCCCCCGTCATTGGGGAAGCCAAT
TTGGCAGCATACAAAGCAGGTTTCAATGATTCAAAATCAGATCAAGCCACACGAATTTCT
TTCAAGTATGGTTGCGCACGAGGTGTTACGGGAACACCGTACTTCTTTGTGAATGGCATC
CCCCTTATTAGTGACTCTGGTTCCCCACTGGAATACAACAAGTGGAAATCAATCCTTGAT
CCATTGGTTGGCAAGATGTAG

Peptide Sequence

PEP ID

Os04t0227500-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:8528512:8533136:1 gene:Os04g0227500 transcript:Os04t0227500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DSBA oxidoreductase family protein. (Os04t0227500-01)
Sequence

MEARHRVMSLLLVLVIGCCAWGCRPGAAQVPVPARTDGFVYGGKAPALGETVVVEAYFDP
VCPDSRDAWPELKKAVEHYASRVTVVVHLFPLPYHSNAFISCRSIHAVNKINPSFVYPLL
ERFFKYQEGYYNQPTYGKTRATVDAEVAKNLVAPVIGEANLAAYKAGFNDSKSDQATRIS
FKYGCARGVTGTPYFFVNGIPLISDSGSPLEYNKWKSILDPLVGKM

Transcript Sequence

Transcript ID

Os04t0227500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:8528512:8533136:1 gene:Os04g0227500 gene_biotype:protein_coding transcript_biotype:protein_coding description:DSBA oxidoreductase family protein. (Os04t0227500-01)
Sequence

ACAAGCTTATTATGCACATTCGAATTGCTAGCTAGCTCGTCGAAGAAACCAAAGTGCGAG
CGATCGGCTAGCTGCTGCAAGAAGCCTTGACCATGGAGGCCAGACACCGTGTGATGTCGC
TGCTGCTGGTGCTGGTGATCGGCTGCTGCGCCTGGGGCTGCCGCCCTGGCGCGGCGCAGG
TGCCCGTCCCGGCGAGGACGGACGGGTTCGTGTACGGTGGGAAGGCGCCGGCGCTGGGGG
AGACGGTGGTGGTGGAGGCGTACTTCGACCCCGTCTGCCCGGACAGCCGCGACGCGTGGC
CGGAGCTGAAGAAGGCGGTCGAGCACTACGCCTCGCGGGTGACCGTCGTCGTGCACCTCT
TCCCACTACCTTATCACAGCAATGCCTTCATTTCCTGCCGGTCAATTCATGCCGTGAACA
AGATAAATCCGTCGTTTGTGTATCCCCTGCTCGAGAGATTCTTCAAGTACCAGGAGGGTT
ATTACAACCAGCCAACGTATGGGAAAACAAGAGCTACAGTGGATGCAGAGGTAGCTAAAA
ACCTTGTTGCCCCCGTCATTGGGGAAGCCAATTTGGCAGCATACAAAGCAGGTTTCAATG
ATTCAAAATCAGATCAAGCCACACGAATTTCTTTCAAGTATGGTTGCGCACGAGGTGTTA
CGGGAACACCGTACTTCTTTGTGAATGGCATCCCCCTTATTAGTGACTCTGGTTCCCCAC
TGGAATACAACAAGTGGAAATCAATCCTTGATCCATTGGTTGGCAAGATGTAGAGAGTGT
TTCAACTAAAGTCCTCTGCCTGGTGTTAAATACAAGACTCAAGACAAATAAGCTTGGCGC
AAAAACAGTATGATTTCGCCAAGATATAGATGGAACGATATTGATCACAAAGATCAAGTT
TAGTTAGGCAAATAAAAGGGCAACCCTACTCTAATGACATATATTGTCTTTACCTTGTAT
TATGAGACAGAAAAGAATTTCTATAATACAAAAGAGATGTAGCTCTCACATACAATGGTA
TCCCAGTGTGCTACCAACAAGACTTGTATGAAATATAGTATGCATTTTAAGATTTCGGAT
GTTATGCC