Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0223300-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:8239288:8241854:-1 gene:Os04g0223300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE PEROXIDASE 3 description:Similar to Peroxisome type ascorbate peroxidase. (Os04t0223300-00)
Sequence

ATGTCGGCGGCGCCGGTAGTGGACGCGGAGTACATGGCGGAGGTCGAGAGGGCGCGCCGC
GACCTGCGCGCCCTCATCGCCAGCAAGAGCTGCGCTCCCATCATGCTCCGCCTGGCGTGG
CACGACGCCGGCACGTACGACAAGGCGACGAAGACGGGAGGGCCCAACGGCTCCATCAGG
TTCCCGCAGGAGTACAGCCACGCCGCGAATGCGGGCATCAAGATTGCTATTGATCTGCTA
GAACCGATGAAACAGAAGCATCCCAAGATTACCTATGCTGACCTGTATCAGCTTGCCGGA
GTTGTTGCCGTTGAAGTCACCGGTGGGCCAACTATAGATTATGTTCCTGGCAGGAGGGAT
TCTTCAGATTCCCCAGAGGAAGGCCGTTTGCCAGATGCTAAGAAAGGTGCTGCGCATCTG
AGGGAAGTCTTCTACAGGATGGGCTTATCAGACAAGGACATAGTAGCACTCTCAGGCGGC
CATACTCTCGGGAAAGCTCGTCCCGAAAGATCAGGATTTGATGGTGCCTGGACAAAGGAT
CCACTGAAATTTGACAACTCCTATTTCATTGAGCTTCTGAAAGAGAATTCAGAAGGGCTT
CTGAAGTTGCCTACTGACAAGGCTCTTGTTGAAGATCCTACATTCCGCCGCTATGTCGAA
CTATATGCCAAGGACGAAGATGCATTTTTCAGGGACTATGCAGAGTCGCACAAGAAGCTA
TCTGAGCTGGGGTTCACGCCTCCTCGCTCTGCATTCATCTACAAATCATGCCAGAAACCA
AAGTCCCTGTTGATGCAAACTGCAGCTGGGGTTGCAGTTGCTGCTGCAGTTGTCGCATGG
GCTTACCTCTGTGAATCCAACAAGAGGCTTGGCTAA

Peptide Sequence

PEP ID

Os04t0223300-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:8239288:8241854:-1 gene:Os04g0223300 transcript:Os04t0223300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE PEROXIDASE 3 description:Similar to Peroxisome type ascorbate peroxidase. (Os04t0223300-00)
Sequence

MSAAPVVDAEYMAEVERARRDLRALIASKSCAPIMLRLAWHDAGTYDKATKTGGPNGSIR
FPQEYSHAANAGIKIAIDLLEPMKQKHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRD
SSDSPEEGRLPDAKKGAAHLREVFYRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKD
PLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKL
SELGFTPPRSAFIYKSCQKPKSLLMQTAAGVAVAAAVVAWAYLCESNKRLG

Transcript Sequence

Transcript ID

Os04t0223300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:8239288:8241854:-1 gene:Os04g0223300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE PEROXIDASE 3 description:Similar to Peroxisome type ascorbate peroxidase. (Os04t0223300-00)
Sequence

CTATCACCTCTCCTCGGATCGTCAGCAACAGCGGCGGCGATGTCGGCGGCGCCGGTAGTG
GACGCGGAGTACATGGCGGAGGTCGAGAGGGCGCGCCGCGACCTGCGCGCCCTCATCGCC
AGCAAGAGCTGCGCTCCCATCATGCTCCGCCTGGCGTGGCACGACGCCGGCACGTACGAC
AAGGCGACGAAGACGGGAGGGCCCAACGGCTCCATCAGGTTCCCGCAGGAGTACAGCCAC
GCCGCGAATGCGGGCATCAAGATTGCTATTGATCTGCTAGAACCGATGAAACAGAAGCAT
CCCAAGATTACCTATGCTGACCTGTATCAGCTTGCCGGAGTTGTTGCCGTTGAAGTCACC
GGTGGGCCAACTATAGATTATGTTCCTGGCAGGAGGGATTCTTCAGATTCCCCAGAGGAA
GGCCGTTTGCCAGATGCTAAGAAAGGTGCTGCGCATCTGAGGGAAGTCTTCTACAGGATG
GGCTTATCAGACAAGGACATAGTAGCACTCTCAGGCGGCCATACTCTCGGGAAAGCTCGT
CCCGAAAGATCAGGATTTGATGGTGCCTGGACAAAGGATCCACTGAAATTTGACAACTCC
TATTTCATTGAGCTTCTGAAAGAGAATTCAGAAGGGCTTCTGAAGTTGCCTACTGACAAG
GCTCTTGTTGAAGATCCTACATTCCGCCGCTATGTCGAACTATATGCCAAGGACGAAGAT
GCATTTTTCAGGGACTATGCAGAGTCGCACAAGAAGCTATCTGAGCTGGGGTTCACGCCT
CCTCGCTCTGCATTCATCTACAAATCATGCCAGAAACCAAAGTCCCTGTTGATGCAAACT
GCAGCTGGGGTTGCAGTTGCTGCTGCAGTTGTCGCATGGGCTTACCTCTGTGAATCCAAC
AAGAGGCTTGGCTAATTTAATTTGCATCGATCACAATGATCGTTATTTCGTCTCAACCAC
TAATGGCTGTACAAAAAGAAGGTACTCGATTGGAACATTTGGATGATGTATATGTGTTTG
TTGGTATATATATGTGAGTGCTGCTAAGTCTGCTATGTTG