Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0223000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:8216513:8233284:-1 gene:Os04g0223000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec1-like protein family protein. (Os04t0223000-01)
Sequence	ATGGCTCAGATCCCCAATCTCGACAATGCTCCTCTCAATCTCGCGGCCCTCAGGGAGCAG TCGCAGAAGGACCTGCTAAACATCCTCAAGAGTATTAGGGGGAAGAAGTGTGTAGTTATT GATCCCAAGCTCGCGGGTACCCTGTCTCTGATTCTGCAGACCTCACTGCTAAAGGAATAT GGTGCAGAGTTGCGGCTTCTCTCTGCTGAACCCCTCCAAACTGAGTGCGCTAAGATCCTA TATCTCGTACGCTCTGAGCTGAAGTTCATGAAATTAATTGCAAGCCAGATTAAGAACGAT GAGCCTAAAGGGCTTCAGAGGGAATTCTTTCTTTACTTTGTGCCACGGCGCACAGTTGCC TGCGAAAAGATTCTGGAGGAGGAAAAAGTTCATCAGAAATTGACACTCGGAGAGTACCCC TTGTATCTAGTTCCATTGGATGAAGATGTGATTTGTTTTGAACTTGATCATTCTCTGCAG GAATGCCTTATTGAAGGGGATACTAGTTCTGTTTGGCATGTTGCAAAAGCTATCCATAAG TTAGAGTTTGCCTTTGGAGTAATTCCCAATGTTCGGGCCAAGGGTGTTGCATCCACCAAA GCCGCAGAGTTGCTGAATAGTATGCAACAGGAAGATCCTGTCAACATGGATGATATGGGG ACTCCGGAGATAAACACTGTTATTTTGTTAGACAGAGAGGTGGATTTAGTGACACCGATG TGCTCTCAGTTGACATATGAAGGTTTATTAGATGAGATGTTGCAAATAAACAATGGATCT GTGGAGGTTGATGCCACTATTATGGGAGCCCAACAAGATGGTAAAAAAGTTAAAGTTCCA CTGAATTCAAGTGATAAGTTGTACAAGGAAATTCGAGATCTCAATTTTGAAGTTGTAGTT CAGGTCTTGCGCCAAAAGGCAACATCTATTCAGCAAGATTACGCCGAAGTAAAATCCACC AATACTCAATCGGTTTCGGAGCTGAAGGACTTTGTGAAGAGGTTACATTCACTGCCAGAG ATAGCTAGGCATGTTCATTTGGCACAACACTTGCAATCATTTACTGGAAAACCTTCCTTT CATGCCCGATTAGACATTGAACAAACAATATTGGAGGTGCAAAACTTTGAAATATGTTTT GAATACATTGAAGAGATGATACATAAGCAGGAGCCTATTGAAAATGTTCTTCGCCTTCTA GTGTTACTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAGGCGG GAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAATCTGGAAAAGGCT GGCCTATTTAAGCGCCAGGAATCAAGAAGTAACTGGATTGGTATTACAAGGGCTCTACAG CTTATAGTTGATGTAAATGATACTGCAAACCCTAGTGATATATCATACATATTTTCTGGA TACGCCCCTCTCAGTATTCGCCTTGTTCAGCATGCTGTGAGATCTGGATGGCGATCTATT GAAGAACTGTTGAAACTATTGCCAGGTCCTCATCTGGATTTGAAAAGAGGTAGTTCGGCC ATTAATTCTTCATTGGATGTACACCAAGGTTTGGGGCTTCAACAGAGTATTGACAGGGTT GGACATCGTTCTCTGGTTTTGGTTGTCTTTATTGGTGGGGTTACTTTTGCAGAGATTGCT GCTCTTCGATTCCTTAGTTCTCAGGAAGGGATGGGCTATGACTTCCTTGTTGCGACCACA AAGGTTGTCAATGGGAACACAATACTCAGGCCAATTATAACCAATAGCAAAGAGGTGATG ATATAG

Peptide Sequence

PEP ID	Os04t0223000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:8216513:8233284:-1 gene:Os04g0223000 transcript:Os04t0223000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec1-like protein family protein. (Os04t0223000-01)
Sequence	MAQIPNLDNAPLNLAALREQSQKDLLNILKSIRGKKCVVIDPKLAGTLSLILQTSLLKEY GAELRLLSAEPLQTECAKILYLVRSELKFMKLIASQIKNDEPKGLQREFFLYFVPRRTVA CEKILEEEKVHQKLTLGEYPLYLVPLDEDVICFELDHSLQECLIEGDTSSVWHVAKAIHK LEFAFGVIPNVRAKGVASTKAAELLNSMQQEDPVNMDDMGTPEINTVILLDREVDLVTPM CSQLTYEGLLDEMLQINNGSVEVDATIMGAQQDGKKVKVPLNSSDKLYKEIRDLNFEVVV QVLRQKATSIQQDYAEVKSTNTQSVSELKDFVKRLHSLPEIARHVHLAQHLQSFTGKPSF HARLDIEQTILEVQNFEICFEYIEEMIHKQEPIENVLRLLVLLSLTNAGLPKKNFDYLRR EILHSYGFEHMPLLYNLEKAGLFKRQESRSNWIGITRALQLIVDVNDTANPSDISYIFSG YAPLSIRLVQHAVRSGWRSIEELLKLLPGPHLDLKRGSSAINSSLDVHQGLGLQQSIDRV GHRSLVLVVFIGGVTFAEIAALRFLSSQEGMGYDFLVATTKVVNGNTILRPIITNSKEVM I

Transcript Sequence

Transcript ID	Os04t0223000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:8216513:8233284:-1 gene:Os04g0223000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec1-like protein family protein. (Os04t0223000-01)
Sequence	GTTCTCTCTTCTCTAGTAGACTCGTTCTCTCTCCCCCTTTCCTTCCCCTCGGCCTCGACT CCCCCGTCTCTCCGCGCCAGCTCGTTCCCCGCCGGCGCCGCCCAGCGCCGATCTCCGTCC CGGGGGCAGCAGCGGGCGCCGCCGACCTGCTGCTTCCGCCCGCATCCTCGTCGCCGGTTT GGCCCGGCTCTGAAGTAAGCAGGATTCTGAATCTGAGAACGAGGAGTTGGATTGGGGGAC TATGGCTCAGATCCCCAATCTCGACAATGCTCCTCTCAATCTCGCGGCCCTCAGGGAGCA GTCGCAGAAGGACCTGCTAAACATCCTCAAGAGTATTAGGGGGAAGAAGTGTGTAGTTAT TGATCCCAAGCTCGCGGGTACCCTGTCTCTGATTCTGCAGACCTCACTGCTAAAGGAATA TGGTGCAGAGTTGCGGCTTCTCTCTGCTGAACCCCTCCAAACTGAGTGCGCTAAGATCCT ATATCTCGTACGCTCTGAGCTGAAGTTCATGAAATTAATTGCAAGCCAGATTAAGAACGA TGAGCCTAAAGGGCTTCAGAGGGAATTCTTTCTTTACTTTGTGCCACGGCGCACAGTTGC CTGCGAAAAGATTCTGGAGGAGGAAAAAGTTCATCAGAAATTGACACTCGGAGAGTACCC CTTGTATCTAGTTCCATTGGATGAAGATGTGATTTGTTTTGAACTTGATCATTCTCTGCA GGAATGCCTTATTGAAGGGGATACTAGTTCTGTTTGGCATGTTGCAAAAGCTATCCATAA GTTAGAGTTTGCCTTTGGAGTAATTCCCAATGTTCGGGCCAAGGGTGTTGCATCCACCAA AGCCGCAGAGTTGCTGAATAGTATGCAACAGGAAGATCCTGTCAACATGGATGATATGGG GACTCCGGAGATAAACACTGTTATTTTGTTAGACAGAGAGGTGGATTTAGTGACACCGAT GTGCTCTCAGTTGACATATGAAGGTTTATTAGATGAGATGTTGCAAATAAACAATGGATC TGTGGAGGTTGATGCCACTATTATGGGAGCCCAACAAGATGGTAAAAAAGTTAAAGTTCC ACTGAATTCAAGTGATAAGTTGTACAAGGAAATTCGAGATCTCAATTTTGAAGTTGTAGT TCAGGTCTTGCGCCAAAAGGCAACATCTATTCAGCAAGATTACGCCGAAGTAAAATCCAC CAATACTCAATCGGTTTCGGAGCTGAAGGACTTTGTGAAGAGGTTACATTCACTGCCAGA GATAGCTAGGCATGTTCATTTGGCACAACACTTGCAATCATTTACTGGAAAACCTTCCTT TCATGCCCGATTAGACATTGAACAAACAATATTGGAGGTGCAAAACTTTGAAATATGTTT TGAATACATTGAAGAGATGATACATAAGCAGGAGCCTATTGAAAATGTTCTTCGCCTTCT AGTGTTACTTTCACTTACAAATGCTGGGTTGCCAAAGAAGAATTTTGACTACTTGAGGCG GGAAATACTGCACAGTTATGGCTTTGAGCACATGCCCTTGTTATACAATCTGGAAAAGGC TGGCCTATTTAAGCGCCAGGAATCAAGAAGTAACTGGATTGGTATTACAAGGGCTCTACA GCTTATAGTTGATGTAAATGATACTGCAAACCCTAGTGATATATCATACATATTTTCTGG ATACGCCCCTCTCAGTATTCGCCTTGTTCAGCATGCTGTGAGATCTGGATGGCGATCTAT TGAAGAACTGTTGAAACTATTGCCAGGTCCTCATCTGGATTTGAAAAGAGGTAGTTCGGC CATTAATTCTTCATTGGATGTACACCAAGGTTTGGGGCTTCAACAGAGTATTGACAGGGT TGGACATCGTTCTCTGGTTTTGGTTGTCTTTATTGGTGGGGTTACTTTTGCAGAGATTGC TGCTCTTCGATTCCTTAGTTCTCAGGAAGGGATGGGCTATGACTTCCTTGTTGCGACCAC AAAGGTTGTCAATGGGAACACAATACTCAGGCCAATTATAACCAATAGCAAAGAGGTGAT GATATAGAGTAAATAATCTTTTGCTGCACATCCTTTTCTTTTCTGATTGTACTCTCACAC ACCCGAGCTCCACTTGGTTCTCATAGTTGTTACGGCTCCCTTGTATGTTCTCAAACTGAG TGTATATATTTTAACATCTGTAGATCTTTCTAGATTAAAATTCCGCATTCTAGTTTGGCA TTTCAGTTCTCTATTGCCCGTTTTCATTTTCCTTTTCTACCTCTTGTTGAATGTGCAAAC TTGAACGACACCAGTTATTTCTCTTTCAAATCCACTGTATTTTGCATC