Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0221600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:8117448:8126285:-1 gene:Os04g0221600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os04t0221600-01)
Sequence	CCCCTCCGCGTCGCCGCCGTCCTCTGCCGCCGCCGTCGTCCGTGTCTCCTGTATTCCTCC TCCCCTTTGTGTGGGAGATTGTCTGCCCAATCTCTGGAATCGACAAGGTTTGGTGGTGGC AACCCGCTCCGGCGGCTGCCTCTCGTCTCTCCACCACCCCGTCCCGCCGATTTTCCGCCT CGACCTGGTGGTGCAGTGCTCGATTCGGCAGTTCGGGGCTTACCGAGGGCGCAGGGTGTC GATGTGCAGCCCGAGGAATCGCATATCCGAAGGGGAGTCGAAATTAGGGTTTCCCTCTAC TCGCCGCCGATGAAGGGGGGCCGCTTGCACCGTCTGGAGCGGCCGCCCGCCGCCCACATC ACCACCGCCGCAGCCGCCACCACGCCCGCTCCGGCGCCCGCCGATGATTGGGGGGATGGC TCGTGGACGGTGGACTGCTCGTGCGGCATCACGTACGACGACGGGGAGGAGATGGTGAGC TGCGACGAGTGCAACGTCTGGGTGCACACGCGGTGCGCCCGCTACGTCCGCGGCGTGCAC ATCTCTTTCTCTTGCCACAACTGCAAGGCCAAGCGCGCCCCCTCCTCCGCCGACGAGGCT GAGGTCGCCGAGCTCCTGGCCGAGCTGCCCACCCACCGCCCACGGCCGTTGTACCGCCGA TGGGCTGAAGTCCCTCTCCCCTCCCGTGTCCATGTCCACGGGCTTCCAGGCGGTACAGAC ACCGCCCTATTCCGCAGCGCCGCACCCTCCCCTGTATTCTCGTCCGCCCTATGGCGCTGT GCTGGGTACGTACCCAAGAGATTCGGCTTCCGCTACTGCGAATTCCCCTACTGGGCTGAT GACAAGGACGGTGCCAACGCTCTATTTGCGCTGGCTAGAGAGAAGCGCAAGGAAAAGGCA GAGACTAGGTTCCCTCTCCGCCTTGGAGCCATACACAAGGACAAGAATTATGTCAGGACG CTGAGCATTTGCGGCGATAAGGTGGATGGCGTTGAGCACTCTGTGGACGATGACGCAAAG AGGACATCTCCACCAAGTGATGCAAAGAAGAGAGGAACATCCATTAGCATTGTAGAGCCT GATACTTGGGACAATGGTTGTGAGAAGAAAAGGGATTTTGATGTGCCAGCTAGTGAGGAT CAGCATGCCAAAACAAACATGGTAAATTCTGATTTGCACGTGCTTGTTGAAGCTAAGAAG AAGAGGGCTTCATCCTCAGAACGAAGTGGGGATAAGAAGTGCTCTGCCTCGAAGGAAATT ACTGGGATGCTAAAGAAATATGAACCTAAGGAGTCCAAGCGATTGGTGATATCCTCAGGA GTTGCAACAACGGCAGCTGTAGCAGAGCAAGAAGTGCACTCACGATTTGTGAAGGGTAGC GTGTATGAAGGACTAGACGGGAATCAAAATGTAGGTTTACAGACTGGAGTAAGATCGAAT GGAGTTGTGAAAAGGGATGATGCCAAACGATCAAATGGAGATGTCCAGAGCGATGCTGCT CCTGAGAAAATGAATGAGGGTCTGGATCTTCAGAAGCAATCAAATCAAACTTCAAATCTT CTGGTTGTTGGTGGTGTACCGGATTTACAGACTAACCAGTCAGAATCATTGACTATCAAG AAGGAAGCATCTACAGATGATCATGAGAGAACCGAGGCTATCCAGTTTGTAAGTGATGAG CATAAAAGTGGAAAACAAGATACTGCAATGTTATCAACCCTTCAGAGGCATTCGTCCAAG TTAGCATCTGACTTAGTTTATCAACATCCAAAGTCTGAAACACAAAATCCGATGCACACA ATACCAGAGCATCCAAACTCAAGTTTAGAACCATCATCAGAAGAAACTACTGTTCGTTTG GTAAAGAAGGATCAGACAAGGTTGGTCTCATCCGCTGACAGCGAAAATGATTTTGCAAAA AAATCTGAGAGTTCCCAGGATCGCACAAGATCCTCTGATAAAGTTCAATTGAAAGGCTTT GTTCCGTCTGCGCCAAAATCATCTCAAGGAAGTAGAACATATGTATCTTCTGCCAAAAAT AGATTTATAGTGCCAAAGGAGCAGTTGCAAAAGACATCAACTGAAGGAAACGCTCCACCA GGGTCATTACAAGGTGAAGTGGCACCCTTACATTCTCGTAATAAGGCAATGCCTTTGAGC TTTTACCAAAGAAAGGACAAGATCCACCACCGCTCTATTCATATCACACAGGACACTTCC AATAGTTCAGCATCGGCTGAGCTGCAATCTACTGAAACAACAGCTTCATTGAGCGATGAA CAGCTTGCATTGTTATTACATCAACAATTGAACAGCTCCCCCAGAGTACCAAGGGTGCCA CGTTGTCATCAAGCATCTACCATGCAGATGCTACATCCAACTGGAGCTAGTGTGTTCTCA AAACGGTCTTCAGCACATGGAGGAAGGGATCAAGCACTGGTCTTAAAGAAGAGGAACAAA GATGATGCATGGAGAGATAATGATGAGACCAAGAAGACAGGAAAGGTGTCTAGTGTTGAA CGGAGGCATAGAGATAGTAGCACAGAACGTGTCCTTGCTGCAAAAGACTCATGCAAATTT ACTGAAAATATAGAATCAGAACAGAGAAATCGTGGCATTTGTTCAACTGGAGCCACCTCT GGCGTAGGAAATGATGCTCCAATAGATAGAGGTGTTTCACATGATTTACCTGGGTTGATT GAGGAAATCATTAGCAAAAATACAAACATAACATATGGTGAACTGTGCAACGCTATTCGC CAGCATTGGGGGGATTTAAGTAAACCCAACGTGGAAAACAATGCATACCCCAACTATTTA CATGCTGTTAACGATTGTCTTAGGAACAGGAATGACTGGGCTCACCTTGTTGACCAGGCT GCAATGATGAATCCAAACAAGCGCCGGAAGGTAGAGGAAAGTGACTCTTTGTCAGCAGAT GTACTGGCAACCGAGAAGACAAATAAAGAGGCTAAAAGGGGTCCAGAAGACACAAATGCT GAATCACACCATGAAATTCTGCCAAGGGGCAAACGCAAGGCTCGGAAATGCAGGCGTCTT GAACTGAAAGGGAGGAGAGTCAACGATACGAGGAAGAGATCTAGCTTTGATTCGGCCTCT GATGATGATGATACCACCTTGTCGGATTCCAGTAGTGACAGAAATGACACCCCTATGGAT AAGAGCCTAGAAGATAGTTTTGTTATAGCTAAGAATGCAGATTCAAGTTCATAG

Peptide Sequence

PEP ID	Os04t0221600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:8117448:8126285:-1 gene:Os04g0221600 transcript:Os04t0221600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os04t0221600-01)
Sequence	PLRVAAVLCRRRRPCLLYSSSPLCGRLSAQSLESTRFGGGNPLRRLPLVSPPPRPADFPP RPGGAVLDSAVRGLPRAQGVDVQPEESHIRRGVEIRVSLYSPPMKGGRLHRLERPPAAHI TTAAAATTPAPAPADDWGDGSWTVDCSCGITYDDGEEMVSCDECNVWVHTRCARYVRGVH ISFSCHNCKAKRAPSSADEAEVAELLAELPTHRPRPLYRRWAEVPLPSRVHVHGLPGGTD TALFRSAAPSPVFSSALWRCAGYVPKRFGFRYCEFPYWADDKDGANALFALAREKRKEKA ETRFPLRLGAIHKDKNYVRTLSICGDKVDGVEHSVDDDAKRTSPPSDAKKRGTSISIVEP DTWDNGCEKKRDFDVPASEDQHAKTNMVNSDLHVLVEAKKKRASSSERSGDKKCSASKEI TGMLKKYEPKESKRLVISSGVATTAAVAEQEVHSRFVKGSVYEGLDGNQNVGLQTGVRSN GVVKRDDAKRSNGDVQSDAAPEKMNEGLDLQKQSNQTSNLLVVGGVPDLQTNQSESLTIK KEASTDDHERTEAIQFVSDEHKSGKQDTAMLSTLQRHSSKLASDLVYQHPKSETQNPMHT IPEHPNSSLEPSSEETTVRLVKKDQTRLVSSADSENDFAKKSESSQDRTRSSDKVQLKGF VPSAPKSSQGSRTYVSSAKNRFIVPKEQLQKTSTEGNAPPGSLQGEVAPLHSRNKAMPLS FYQRKDKIHHRSIHITQDTSNSSASAELQSTETTASLSDEQLALLLHQQLNSSPRVPRVP RCHQASTMQMLHPTGASVFSKRSSAHGGRDQALVLKKRNKDDAWRDNDETKKTGKVSSVE RRHRDSSTERVLAAKDSCKFTENIESEQRNRGICSTGATSGVGNDAPIDRGVSHDLPGLI EEIISKNTNITYGELCNAIRQHWGDLSKPNVENNAYPNYLHAVNDCLRNRNDWAHLVDQA AMMNPNKRRKVEESDSLSADVLATEKTNKEAKRGPEDTNAESHHEILPRGKRKARKCRRL ELKGRRVNDTRKRSSFDSASDDDDTTLSDSSSDRNDTPMDKSLEDSFVIAKNADSSS

Transcript Sequence

Transcript ID	Os04t0221600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:8117448:8126285:-1 gene:Os04g0221600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os04t0221600-01)
Sequence	CCCCTCCGCGTCGCCGCCGTCCTCTGCCGCCGCCGTCGTCCGTGTCTCCTGTATTCCTCC TCCCCTTTGTGTGGGAGATTGTCTGCCCAATCTCTGGAATCGACAAGGTTTGGTGGTGGC AACCCGCTCCGGCGGCTGCCTCTCGTCTCTCCACCACCCCGTCCCGCCGATTTTCCGCCT CGACCTGGTGGTGCAGTGCTCGATTCGGCAGTTCGGGGCTTACCGAGGGCGCAGGGTGTC GATGTGCAGCCCGAGGAATCGCATATCCGAAGGGGAGTCGAAATTAGGGTTTCCCTCTAC TCGCCGCCGATGAAGGGGGGCCGCTTGCACCGTCTGGAGCGGCCGCCCGCCGCCCACATC ACCACCGCCGCAGCCGCCACCACGCCCGCTCCGGCGCCCGCCGATGATTGGGGGGATGGC TCGTGGACGGTGGACTGCTCGTGCGGCATCACGTACGACGACGGGGAGGAGATGGTGAGC TGCGACGAGTGCAACGTCTGGGTGCACACGCGGTGCGCCCGCTACGTCCGCGGCGTGCAC ATCTCTTTCTCTTGCCACAACTGCAAGGCCAAGCGCGCCCCCTCCTCCGCCGACGAGGCT GAGGTCGCCGAGCTCCTGGCCGAGCTGCCCACCCACCGCCCACGGCCGTTGTACCGCCGA TGGGCTGAAGTCCCTCTCCCCTCCCGTGTCCATGTCCACGGGCTTCCAGGCGGTACAGAC ACCGCCCTATTCCGCAGCGCCGCACCCTCCCCTGTATTCTCGTCCGCCCTATGGCGCTGT GCTGGGTACGTACCCAAGAGATTCGGCTTCCGCTACTGCGAATTCCCCTACTGGGCTGAT GACAAGGACGGTGCCAACGCTCTATTTGCGCTGGCTAGAGAGAAGCGCAAGGAAAAGGCA GAGACTAGGTTCCCTCTCCGCCTTGGAGCCATACACAAGGACAAGAATTATGTCAGGACG CTGAGCATTTGCGGCGATAAGGTGGATGGCGTTGAGCACTCTGTGGACGATGACGCAAAG AGGACATCTCCACCAAGTGATGCAAAGAAGAGAGGAACATCCATTAGCATTGTAGAGCCT GATACTTGGGACAATGGTTGTGAGAAGAAAAGGGATTTTGATGTGCCAGCTAGTGAGGAT CAGCATGCCAAAACAAACATGGTAAATTCTGATTTGCACGTGCTTGTTGAAGCTAAGAAG AAGAGGGCTTCATCCTCAGAACGAAGTGGGGATAAGAAGTGCTCTGCCTCGAAGGAAATT ACTGGGATGCTAAAGAAATATGAACCTAAGGAGTCCAAGCGATTGGTGATATCCTCAGGA GTTGCAACAACGGCAGCTGTAGCAGAGCAAGAAGTGCACTCACGATTTGTGAAGGGTAGC GTGTATGAAGGACTAGACGGGAATCAAAATGTAGGTTTACAGACTGGAGTAAGATCGAAT GGAGTTGTGAAAAGGGATGATGCCAAACGATCAAATGGAGATGTCCAGAGCGATGCTGCT CCTGAGAAAATGAATGAGGGTCTGGATCTTCAGAAGCAATCAAATCAAACTTCAAATCTT CTGGTTGTTGGTGGTGTACCGGATTTACAGACTAACCAGTCAGAATCATTGACTATCAAG AAGGAAGCATCTACAGATGATCATGAGAGAACCGAGGCTATCCAGTTTGTAAGTGATGAG CATAAAAGTGGAAAACAAGATACTGCAATGTTATCAACCCTTCAGAGGCATTCGTCCAAG TTAGCATCTGACTTAGTTTATCAACATCCAAAGTCTGAAACACAAAATCCGATGCACACA ATACCAGAGCATCCAAACTCAAGTTTAGAACCATCATCAGAAGAAACTACTGTTCGTTTG GTAAAGAAGGATCAGACAAGGTTGGTCTCATCCGCTGACAGCGAAAATGATTTTGCAAAA AAATCTGAGAGTTCCCAGGATCGCACAAGATCCTCTGATAAAGTTCAATTGAAAGGCTTT GTTCCGTCTGCGCCAAAATCATCTCAAGGAAGTAGAACATATGTATCTTCTGCCAAAAAT AGATTTATAGTGCCAAAGGAGCAGTTGCAAAAGACATCAACTGAAGGAAACGCTCCACCA GGGTCATTACAAGGTGAAGTGGCACCCTTACATTCTCGTAATAAGGCAATGCCTTTGAGC TTTTACCAAAGAAAGGACAAGATCCACCACCGCTCTATTCATATCACACAGGACACTTCC AATAGTTCAGCATCGGCTGAGCTGCAATCTACTGAAACAACAGCTTCATTGAGCGATGAA CAGCTTGCATTGTTATTACATCAACAATTGAACAGCTCCCCCAGAGTACCAAGGGTGCCA CGTTGTCATCAAGCATCTACCATGCAGATGCTACATCCAACTGGAGCTAGTGTGTTCTCA AAACGGTCTTCAGCACATGGAGGAAGGGATCAAGCACTGGTCTTAAAGAAGAGGAACAAA GATGATGCATGGAGAGATAATGATGAGACCAAGAAGACAGGAAAGGTGTCTAGTGTTGAA CGGAGGCATAGAGATAGTAGCACAGAACGTGTCCTTGCTGCAAAAGACTCATGCAAATTT ACTGAAAATATAGAATCAGAACAGAGAAATCGTGGCATTTGTTCAACTGGAGCCACCTCT GGCGTAGGAAATGATGCTCCAATAGATAGAGGTGTTTCACATGATTTACCTGGGTTGATT GAGGAAATCATTAGCAAAAATACAAACATAACATATGGTGAACTGTGCAACGCTATTCGC CAGCATTGGGGGGATTTAAGTAAACCCAACGTGGAAAACAATGCATACCCCAACTATTTA CATGCTGTTAACGATTGTCTTAGGAACAGGAATGACTGGGCTCACCTTGTTGACCAGGCT GCAATGATGAATCCAAACAAGCGCCGGAAGGTAGAGGAAAGTGACTCTTTGTCAGCAGAT GTACTGGCAACCGAGAAGACAAATAAAGAGGCTAAAAGGGGTCCAGAAGACACAAATGCT GAATCACACCATGAAATTCTGCCAAGGGGCAAACGCAAGGCTCGGAAATGCAGGCGTCTT GAACTGAAAGGGAGGAGAGTCAACGATACGAGGAAGAGATCTAGCTTTGATTCGGCCTCT GATGATGATGATACCACCTTGTCGGATTCCAGTAGTGACAGAAATGACACCCCTATGGAT AAGAGCCTAGAAGATAGTTTTGTTATAGCTAAGAATGCAGATTCAAGTTCATAGAGGTGG TTCAATGCAGTGCTGCTGGCAATACATTCGAATGGAGTTGGTGAAGAAAGTCAGATTTAG CGACCGCAGATCGGTTCACTTGTAAGTTGTAACAGTAGTGTAACATAGTTAATCCTTTTC TCGCCTAACTGTAATGCAGGTAGATTTGTTGAAGTAGCGTATCATGTAAGCAATTTGCAA TTTGTAGCGTCTGATGATTGCGCCCAAAATAACAAGCATTATGTGTATCAGCGTATCTAG TTATTTTGTGGCGGATTGGTTGGTAACCTAAGCAAAAAATGTCTACGAAACTGCAATTGA AC