Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0221000-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:8064674:8072284:-1 gene:Os04g0221000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0221000-01)
Sequence

ATGCCGAAGCCCAACCATCGTGCCCGCTCCGCCGCTGCCGGCGGCGGCGGGGGCGGCGGG
GGCCCGATAGACGCGGATTGGAAGTACTTCCTCGACAATGTCCGCGAGGAAGGCCACTCC
TACGCCGTCCGCGTCCCTGCCGACGGCGCCAACCCTTCCTACTACCTCCAATACGAGAAG
CCCCTCACCAACGGCGCCGCCTCCACCTCCTCCCGGGGCGGGGCTGCACGCAAGCGCTGC
CGGATGGAGGAGGAGGAGGAGGAGGAGAGCTCGTCCGGCGAACCCGAACCCGCACCCGAC
CCCGACATTGAAGAGGACTACCGCGTGTTCCTTCAGAACGTGCGCCTCGTTGGGCATGGC
GGCTTCGTGCTGGAGCATGAGGGCAATGTGATCAGGTACGATGCTTCGGGCGCGGCGCTC
AGCTCGGATGAGTCTTCCGATGAGTCCGTGATGGGTGCTCCGGAGCCCGATCCGCGTCGA
CGAAAGGCGAAAATTGTGGAGGAGGATCAGGAGGAGGAGGAGGATGTGAAGAATGAGGTT
GCCGTTCCGTCTAGAAAGAAAGATTTTACCATGGTAAAAGAGGATCAGGAGAAGAAGGGG
AAGAGAGTGGTCGACCTTCCTGCTAGGGGGGAAGATGGTGCCATGGTGGCGGAAGAGGAT
CGGAAGAAGAAGCTCAGAAAAGAGTTCAACTTTCATTCCTTTCATTCTAAGGGGAAAGAT
GATACAACACCAGTGAAAAATCTGAAGGATAAGAAGAAAGAGGTTAAAAATCCAAAGGAT
AAGAAGGTTCATGGGAAGAAAGAGGTTGCCCTTTCTGCTAAGGGGAAAGATTGTCAATTA
GCAGAGGGTGTGGTGATCAAGGTGGAAGAGGAAGATGGGCAGTTGCAGATTGTGCCGGCT
GTGGAGAAACTAGCGACTACAACTAGACTGACAAACTTAAGCAATGGCCACAAAACCGCC
CCTCGTATCGCTTCGGGGTCACATGGAGTTATATGGCCAATACATATAAATGATAGGGAA
GAATCGGATTTCAAGCAAAGATTGATACATGTTCTCAACAAACCCTTTAGCCAGGGAGAA
TATGACAAACTCTTTGGTATGGCTACTATTCGCAATCCATTGACAAGGGAACGTCGGACA
CGCTGTGGTGTGAAGTATTACTACTCTCAACATGAGAAGGCAAAATCATATTTTGATTGT
TACCCAGATCTTGCCAAACAAGTTGAAGAAGCCAGCTATCCCAATCGCTTGGCTCTGTTG
CGTGGGCTTTTCTTCTGGTTGGAGAATATTGGGCAAGATGATCAATTCAGGCCGTGGAGA
GACGATCACAAACGCTACAAAATTATGTCTCTCTGA

Peptide Sequence

PEP ID

Os04t0221000-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:8064674:8072284:-1 gene:Os04g0221000 transcript:Os04t0221000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0221000-01)
Sequence

MPKPNHRARSAAAGGGGGGGGPIDADWKYFLDNVREEGHSYAVRVPADGANPSYYLQYEK
PLTNGAASTSSRGGAARKRCRMEEEEEEESSSGEPEPAPDPDIEEDYRVFLQNVRLVGHG
GFVLEHEGNVIRYDASGAALSSDESSDESVMGAPEPDPRRRKAKIVEEDQEEEEDVKNEV
AVPSRKKDFTMVKEDQEKKGKRVVDLPARGEDGAMVAEEDRKKKLRKEFNFHSFHSKGKD
DTTPVKNLKDKKKEVKNPKDKKVHGKKEVALSAKGKDCQLAEGVVIKVEEEDGQLQIVPA
VEKLATTTRLTNLSNGHKTAPRIASGSHGVIWPIHINDREESDFKQRLIHVLNKPFSQGE
YDKLFGMATIRNPLTRERRTRCGVKYYYSQHEKAKSYFDCYPDLAKQVEEASYPNRLALL
RGLFFWLENIGQDDQFRPWRDDHKRYKIMSL

Transcript Sequence

Transcript ID

Os04t0221000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:8064674:8072284:-1 gene:Os04g0221000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0221000-01)
Sequence

GTTCCCCACACTCTCCTCACAGTCACCAATGCCGAAGCCCAACCATCGTGCCCGCTCCGC
CGCTGCCGGCGGCGGCGGGGGCGGCGGGGGCCCGATAGACGCGGATTGGAAGTACTTCCT
CGACAATGTCCGCGAGGAAGGCCACTCCTACGCCGTCCGCGTCCCTGCCGACGGCGCCAA
CCCTTCCTACTACCTCCAATACGAGAAGCCCCTCACCAACGGCGCCGCCTCCACCTCCTC
CCGGGGCGGGGCTGCACGCAAGCGCTGCCGGATGGAGGAGGAGGAGGAGGAGGAGAGCTC
GTCCGGCGAACCCGAACCCGCACCCGACCCCGACATTGAAGAGGACTACCGCGTGTTCCT
TCAGAACGTGCGCCTCGTTGGGCATGGCGGCTTCGTGCTGGAGCATGAGGGCAATGTGAT
CAGGTACGATGCTTCGGGCGCGGCGCTCAGCTCGGATGAGTCTTCCGATGAGTCCGTGAT
GGGTGCTCCGGAGCCCGATCCGCGTCGACGAAAGGCGAAAATTGTGGAGGAGGATCAGGA
GGAGGAGGAGGATGTGAAGAATGAGGTTGCCGTTCCGTCTAGAAAGAAAGATTTTACCAT
GGTAAAAGAGGATCAGGAGAAGAAGGGGAAGAGAGTGGTCGACCTTCCTGCTAGGGGGGA
AGATGGTGCCATGGTGGCGGAAGAGGATCGGAAGAAGAAGCTCAGAAAAGAGTTCAACTT
TCATTCCTTTCATTCTAAGGGGAAAGATGATACAACACCAGTGAAAAATCTGAAGGATAA
GAAGAAAGAGGTTAAAAATCCAAAGGATAAGAAGGTTCATGGGAAGAAAGAGGTTGCCCT
TTCTGCTAAGGGGAAAGATTGTCAATTAGCAGAGGGTGTGGTGATCAAGGTGGAAGAGGA
AGATGGGCAGTTGCAGATTGTGCCGGCTGTGGAGAAACTAGCGACTACAACTAGACTGAC
AAACTTAAGCAATGGCCACAAAACCGCCCCTCGTATCGCTTCGGGGTCACATGGAGTTAT
ATGGCCAATACATATAAATGATAGGGAAGAATCGGATTTCAAGCAAAGATTGATACATGT
TCTCAACAAACCCTTTAGCCAGGGAGAATATGACAAACTCTTTGGTATGGCTACTATTCG
CAATCCATTGACAAGGGAACGTCGGACACGCTGTGGTGTGAAGTATTACTACTCTCAACA
TGAGAAGGCAAAATCATATTTTGATTGTTACCCAGATCTTGCCAAACAAGTTGAAGAAGC
CAGCTATCCCAATCGCTTGGCTCTGTTGCGTGGGCTTTTCTTCTGGTTGGAGAATATTGG
GCAAGATGATCAATTCAGGCCGTGGAGAGACGATCACAAACGCTACAAAATTATGTCTCT
CTGAGAACACATAACAAAGTTCTTACTTGCATGTGATTATCTGCAGCATCTCGCCCATCA
TTGTTGTAAATACGTACCCAGTAAAAAACCGTAGAATGGAAATGGCACTGAATTTAGGCC
CTTCTCTAGTCTCCATAGATAGGATAACCTTGGGTTCTCTCACCTTCTCTTTGTGTAACT
GAGTATGGGGTTGACTAAAATGTGTTTAGAGAATGTTTACTTGTACTAACTCAGTCCGAA
TTCTGGAACACCCTATGGCTCATGGCTTTCTATCGGAGGAGCAAAA