Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0208200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:7250381:7251823:1 gene:Os04g0208200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:senescence-associated gene 12 description:Cysteine proteinase. (Os04t0208200-01)
Sequence

ATGGCTTACACTAATCTCTCCAAGAAACTAGCCGTAGCCTTGGTAGCACTGGCCGTCGCC
TGTGCCCACGCACTCGCGGCGCGCGACCTTGTCGACGCGGCCGCCATGGCGCAGCGGCAC
GAGCGGTGGATGGCCAAGCACGGCCGCGCCTACGCCGACGACGCCGAGAAGGCGCGGCGG
CTGGAGGTGTTCAGGGACAACGTGGCGTTCATCGAGTCGGTGAACGCCGCCGCGAGCCAG
CACAAGTTCTGGCTGGAGGAGAACCAGTTCGCCGACCTCACCAACGCCGAGTTCAGGGCC
ACGCGGACGGGGCTCAGGCCGTCGTCGTCGCGCGGCAACCGCGCCCCGACGTCGTTCCGG
TACGCCAACGTCAGCACCGGCGATCTCCCGGCGAGCGTCGACTGGCGCGGCAAGGGCGCC
GTCAACCCCGTCAAGGACCAAGGCGATTGCGGGTGTTGCTGGGCGTTCTCGGCGGTGGCG
GCCATGGAGGGAGCCGTGAAGCTGGCCACGGGGAAGCTGGTGTCGCTGTCGGAGCAGCAG
CTGGTGTCGTGCGACGTCAAGGGCGAGGACCAGGGCTGCGAGGGCGGGCTCATGGACGAC
GCGTTCGACTTCATCATCAAGAACGGCGGCCTCGCCGCGGAGTCCGACTACCCGTACACG
GCGAGCGACGACAAGTGCGCCACCGCCGGCGCCGGCGCCGCCGCCGCGACCATCAAGGGG
TACGAGGACGTGCCGGCGAACGACGAGGCGGCGCTGCTCAAGGCCGTGGCGAACCAGCCG
GTGTCGGTGGCCATCGACGGCGGCGACCGGCACTTCCAGTTCTACAAGGGCGGCGTCCTC
TCCGGCGCCGCCGGCTGCGCCACCGAGCTGGACCACGCGATCACGGCGGTCGGGTACGGC
GTGGCGAGCGACGGGACCAAGTACTGGCTGATGAAGAACTCGTGGGGCACGTCGTGGGGG
GAGGACGGCTACGTCAGGATGGAGAGGGGCGTCGCCGACAAGGAGGGCGTCTGTGGCCTC
GCCATGATGGCCTCCTACCCGACGGCGTGA

Peptide Sequence

PEP ID

Os04t0208200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:7250381:7251823:1 gene:Os04g0208200 transcript:Os04t0208200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:senescence-associated gene 12 description:Cysteine proteinase. (Os04t0208200-01)
Sequence

MAYTNLSKKLAVALVALAVACAHALAARDLVDAAAMAQRHERWMAKHGRAYADDAEKARR
LEVFRDNVAFIESVNAAASQHKFWLEENQFADLTNAEFRATRTGLRPSSSRGNRAPTSFR
YANVSTGDLPASVDWRGKGAVNPVKDQGDCGCCWAFSAVAAMEGAVKLATGKLVSLSEQQ
LVSCDVKGEDQGCEGGLMDDAFDFIIKNGGLAAESDYPYTASDDKCATAGAGAAAATIKG
YEDVPANDEAALLKAVANQPVSVAIDGGDRHFQFYKGGVLSGAAGCATELDHAITAVGYG
VASDGTKYWLMKNSWGTSWGEDGYVRMERGVADKEGVCGLAMMASYPTA

Transcript Sequence

Transcript ID

Os04t0208200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:7250381:7251823:1 gene:Os04g0208200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:senescence-associated gene 12 description:Cysteine proteinase. (Os04t0208200-01)
Sequence

AAACAAACCAAGCTAAACAATCACCCACTTCTATAGTTAGTTAAGGTAGCAACACTTAAT
TATTTGCAATTAATCTAATTGCATATATAGGATGGCTTACACTAATCTCTCCAAGAAACT
AGCCGTAGCCTTGGTAGCACTGGCCGTCGCCTGTGCCCACGCACTCGCGGCGCGCGACCT
TGTCGACGCGGCCGCCATGGCGCAGCGGCACGAGCGGTGGATGGCCAAGCACGGCCGCGC
CTACGCCGACGACGCCGAGAAGGCGCGGCGGCTGGAGGTGTTCAGGGACAACGTGGCGTT
CATCGAGTCGGTGAACGCCGCCGCGAGCCAGCACAAGTTCTGGCTGGAGGAGAACCAGTT
CGCCGACCTCACCAACGCCGAGTTCAGGGCCACGCGGACGGGGCTCAGGCCGTCGTCGTC
GCGCGGCAACCGCGCCCCGACGTCGTTCCGGTACGCCAACGTCAGCACCGGCGATCTCCC
GGCGAGCGTCGACTGGCGCGGCAAGGGCGCCGTCAACCCCGTCAAGGACCAAGGCGATTG
CGGGTGTTGCTGGGCGTTCTCGGCGGTGGCGGCCATGGAGGGAGCCGTGAAGCTGGCCAC
GGGGAAGCTGGTGTCGCTGTCGGAGCAGCAGCTGGTGTCGTGCGACGTCAAGGGCGAGGA
CCAGGGCTGCGAGGGCGGGCTCATGGACGACGCGTTCGACTTCATCATCAAGAACGGCGG
CCTCGCCGCGGAGTCCGACTACCCGTACACGGCGAGCGACGACAAGTGCGCCACCGCCGG
CGCCGGCGCCGCCGCCGCGACCATCAAGGGGTACGAGGACGTGCCGGCGAACGACGAGGC
GGCGCTGCTCAAGGCCGTGGCGAACCAGCCGGTGTCGGTGGCCATCGACGGCGGCGACCG
GCACTTCCAGTTCTACAAGGGCGGCGTCCTCTCCGGCGCCGCCGGCTGCGCCACCGAGCT
GGACCACGCGATCACGGCGGTCGGGTACGGCGTGGCGAGCGACGGGACCAAGTACTGGCT
GATGAAGAACTCGTGGGGCACGTCGTGGGGGGAGGACGGCTACGTCAGGATGGAGAGGGG
CGTCGCCGACAAGGAGGGCGTCTGTGGCCTCGCCATGATGGCCTCCTACCCGACGGCGTG
ACAACCATCACTCTGAAATCTGAACGAGTGAATGGCATGCAGCTAGCAGGTTTTAAATAA
GCAGTATGGTATTATGGATGGTGCTCTGTTTCTGAATTCGGATAGTACAAAACAGAACTG
GAATGTAATGACAACTTGTGCAAGATCAAAATTTCTTGTCTTCACAACTGGAATCTATCT
ATTATCTATCTATCTATCTATCTATCT