Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0206300-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:7141593:7142740:1 gene:Os04g0206300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SAG39 description:Similar to OSIGBa0147O06.5 protein. (Os04t0206300-00)
Sequence

ATGGCCATGGCCAAGGCTCTGCTCTTCGCCATCCTCGGCTGCCTCTGCCTCTGCAGCGCT
GTTCTAGCAGCTCGTGAGCTGAGCGATGACGCGGCCATGGCGGCGAGGCACGAGAGGTGG
ATGGCGCAGTACGGGCGCGTGTACAGGGACGATGCCGAGAAGGCCCGCCGGTTCGAGGTG
TTCAAGGCCAATGTCGCCTTCATCGAGTCGTTCAATGCTGGTAACCACAATTTCTGGCTT
GGTGTGAACCAGTTCGCCGACCTCACCAATGACGAGTTCAGGTGGATGAAGACCAACAAG
GGATTCATTCCTAGCACGACTAGGGTTCCTACTGGATTCAGGTATGAGAATGTTAACATT
GATGCGCTGCCGGCGACCGTGGACTGGAGAACCAAGGGCGCGGTCACTCCCATCAAGGAT
CAAGGCCAATGTGGTTGTTGTTGGGCGTTTTCGGCCGTGGCAGCCATGGAAGGTATTGTC
AAGCTGAGCACGGGCAAACTTATCTCACTCTCTGAACAAGAGCTTGTTGACTGTGATGTC
CATGGTGAGGACCAGGGCTGCGAAGGTGGGCTCATGGATGACGCCTTCAAATTCATCATC
AAGAATGGCGGCCTCACCACCGAGTCTAACTACCCATACGCAGCAGCAGACGACAAGTGC
AAGAGTGTATCCAACAGCGTCGCATCGATCAAGGGCTATGAGGATGTGCCAGCCAACAAT
GAGGCTGCCCTTATGAAGGCGGTGGCTAACCAACCTGTGTCTGTGGCTGTCGATGGAGGC
GACATGACATTCCAGTTCTACAAAGGTGGTGTGATGACCGGCTCATGTGGCACTGACTTG
GACCATGGTATTGTGGCCATTGGCTATGGCAAGGCTAGTGATGGTACCAAGTATTGGTTG
CTGAAGAACTCCTGGGGCACGACTTGGGGTGAGAATGGTTTCTTGAGGATGGAGAAGGAC
ATTTCTGACAAAAGGGGCATGTGTGGCCTCGCCATGGAGCCTTCCTACCCTACTGCATAG

Peptide Sequence

PEP ID

Os04t0206300-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:7141593:7142740:1 gene:Os04g0206300 transcript:Os04t0206300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SAG39 description:Similar to OSIGBa0147O06.5 protein. (Os04t0206300-00)
Sequence

MAMAKALLFAILGCLCLCSAVLAARELSDDAAMAARHERWMAQYGRVYRDDAEKARRFEV
FKANVAFIESFNAGNHNFWLGVNQFADLTNDEFRWMKTNKGFIPSTTRVPTGFRYENVNI
DALPATVDWRTKGAVTPIKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDV
HGEDQGCEGGLMDDAFKFIIKNGGLTTESNYPYAAADDKCKSVSNSVASIKGYEDVPANN
EAALMKAVANQPVSVAVDGGDMTFQFYKGGVMTGSCGTDLDHGIVAIGYGKASDGTKYWL
LKNSWGTTWGENGFLRMEKDISDKRGMCGLAMEPSYPTA

Transcript Sequence

Transcript ID

Os04t0206300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:7141593:7142740:1 gene:Os04g0206300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SAG39 description:Similar to OSIGBa0147O06.5 protein. (Os04t0206300-00)
Sequence

GTCACAAAGCCTGATCGACCATGGCCATGGCCAAGGCTCTGCTCTTCGCCATCCTCGGCT
GCCTCTGCCTCTGCAGCGCTGTTCTAGCAGCTCGTGAGCTGAGCGATGACGCGGCCATGG
CGGCGAGGCACGAGAGGTGGATGGCGCAGTACGGGCGCGTGTACAGGGACGATGCCGAGA
AGGCCCGCCGGTTCGAGGTGTTCAAGGCCAATGTCGCCTTCATCGAGTCGTTCAATGCTG
GTAACCACAATTTCTGGCTTGGTGTGAACCAGTTCGCCGACCTCACCAATGACGAGTTCA
GGTGGATGAAGACCAACAAGGGATTCATTCCTAGCACGACTAGGGTTCCTACTGGATTCA
GGTATGAGAATGTTAACATTGATGCGCTGCCGGCGACCGTGGACTGGAGAACCAAGGGCG
CGGTCACTCCCATCAAGGATCAAGGCCAATGTGGTTGTTGTTGGGCGTTTTCGGCCGTGG
CAGCCATGGAAGGTATTGTCAAGCTGAGCACGGGCAAACTTATCTCACTCTCTGAACAAG
AGCTTGTTGACTGTGATGTCCATGGTGAGGACCAGGGCTGCGAAGGTGGGCTCATGGATG
ACGCCTTCAAATTCATCATCAAGAATGGCGGCCTCACCACCGAGTCTAACTACCCATACG
CAGCAGCAGACGACAAGTGCAAGAGTGTATCCAACAGCGTCGCATCGATCAAGGGCTATG
AGGATGTGCCAGCCAACAATGAGGCTGCCCTTATGAAGGCGGTGGCTAACCAACCTGTGT
CTGTGGCTGTCGATGGAGGCGACATGACATTCCAGTTCTACAAAGGTGGTGTGATGACCG
GCTCATGTGGCACTGACTTGGACCATGGTATTGTGGCCATTGGCTATGGCAAGGCTAGTG
ATGGTACCAAGTATTGGTTGCTGAAGAACTCCTGGGGCACGACTTGGGGTGAGAATGGTT
TCTTGAGGATGGAGAAGGACATTTCTGACAAAAGGGGCATGTGTGGCCTCGCCATGGAGC
CTTCCTACCCTACTGCATAG