Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0201200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:6902893:6909851:-1 gene:Os04g0201200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os04t0201200-01)
Sequence	ATGGCTCCCTTCGGCGATGGCGGCGGCGGCGGAGGGGAGGAGGAGAAGAGGGAGGGGGAT GCGGGGTGGGGGTGGGACCCGATGAGGAGCGGCAGCGCGCCGCCGACCATGGAGGGCGCC GCGGCGGCGGCGGCTTCGGCGGTGGCGCAGCAGGAGGTGGAGGGGGTTTACGGGGGCGGC GGAGGCGGCGGCGGCGGGTCGTTCTTCTCCGGGATGGATGGGTTCGGCGCGAGGCTCGAC GAGGTCGGCCGGCGGCGCGGCGCCGCCGCGCAGGATCATTTTGGAAATTCTGAGTCATTA TCTAATGGAGCACCAGGCCTCCACCTTAATGGTACGAGAGAGTTTAATGGACAGCAATTT GGACCAACCCGGGTTCATAGTGTTGGCGCTATGCTGGATCACTCTGCAGTTAATGTTGGT TCCCCATGGATACAGACCAAAACAGATGATGCTGACTTTCATAGGCATGCCGAGAATCGC TTCATGCCAAACATGGGAAAGATGAATGCTTTTGCTAGAAGGGACCTTCAGTCCACCTAT CTCTCTGACTCTGATCTTTCAAATGCTTTATCTAGGGTGAACTTGTCTAATCATTTAGAA TATGATGAAAGGGGCCTTGCCAAAGACCTGCTTGATGAAATGGAAATGCGTAATCACGAC AGGCATTTTTCCTCTAAGATTGCCAATGACTGCCGTTCTCCTTTATCTGGCAATGCTTTG TGTACGCTTGGTTGTGAGCACTTGGATGTTCATTCACTACCTTCATATGGAGATGGTCTT CTACGCAGGCAGAACAGTATTATGGATAGTCCCTATGTTTCAAGGAATAATAACCATCAC ATGAAGAATGTGGATCGCCTATCTCTTGCTGATCAACTAGCTTTGATGCAGCTAAGCAAT CTTGACGAGAATAATTACCATAGCAATGCAGATATGGTAAATATAATCAACCCCTTGAGA AACAGACGCAACATCACAGACTTGGACTTAATCAGGAGTAGGAACCATTTCCTTGAAGAA CTTATTGCACAGCGTTGTTTGCAGGAAGATAATGTCTTTCAGTCAAAATCTGGTCCCTCA TATAATGACAACATACTATATCATGATGGACCTCGTTTTCCATATTCAAGAATGCAAAGA TCAGGGTCCCATGCTTATTCACATTTGAGGGGCATTCCATATCTTGGTGATCAGCAATCG CGGATGTTATCCTCTAGTAGGAGGACACCTGGTAGAAATATGGGATCACAAATCTACCAA GATAATCCTGTAGCAAACTGCCTGGATCTGTCTTCTTTGGATCTTGCAAATAGAAGTGGT GCTTGTCCCTTGGAGCTTGTTAATGTAGTGGGCCATGTTATGGAAGTTAGTATGGATCAA TTTGGAAGTCGTTTTATTCAACAAAAACTAGAGGTTGCCTCAGCTGATGACAGGGAAAAA ATCTTTCCAGAGATACTGACCAATGCTATTGCTCTGACAACTGATGTATTTGGCAATTAT GTGATTCAGAAGTTTTTTGAGTTTGCTACAGAAAGCCAGTTAAGCCAGTTAGCAGATCAG CTCAGAGGTCACTTTTTGCAACTCAGCTTTCAGATGTATGGTTGCAGAGTTGTTCAGAAG GTAAGTTATCTTTTTTTTTCTTGGGGTTCATGTAAATCTGTAACCCATGCAAACTCTACA AGTTTATAA

Peptide Sequence

PEP ID	Os04t0201200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:6902893:6909851:-1 gene:Os04g0201200 transcript:Os04t0201200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os04t0201200-01)
Sequence	MAPFGDGGGGGGEEEKREGDAGWGWDPMRSGSAPPTMEGAAAAAASAVAQQEVEGVYGGG GGGGGGSFFSGMDGFGARLDEVGRRRGAAAQDHFGNSESLSNGAPGLHLNGTREFNGQQF GPTRVHSVGAMLDHSAVNVGSPWIQTKTDDADFHRHAENRFMPNMGKMNAFARRDLQSTY LSDSDLSNALSRVNLSNHLEYDERGLAKDLLDEMEMRNHDRHFSSKIANDCRSPLSGNAL CTLGCEHLDVHSLPSYGDGLLRRQNSIMDSPYVSRNNNHHMKNVDRLSLADQLALMQLSN LDENNYHSNADMVNIINPLRNRRNITDLDLIRSRNHFLEELIAQRCLQEDNVFQSKSGPS YNDNILYHDGPRFPYSRMQRSGSHAYSHLRGIPYLGDQQSRMLSSSRRTPGRNMGSQIYQ DNPVANCLDLSSLDLANRSGACPLELVNVVGHVMEVSMDQFGSRFIQQKLEVASADDREK IFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLADQLRGHFLQLSFQMYGCRVVQK VSYLFFSWGSCKSVTHANSTSL

Transcript Sequence

Transcript ID	Os04t0201200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:6902893:6909851:-1 gene:Os04g0201200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os04t0201200-01)
Sequence	ATTTCCATTCCCTCCCCTCCTCTCCTCTCCCGCCCGCGCGCCCCCACCCTCTCCGCCCTA AAACCCAACCAAAACCCTAACCCTAACTCGGCGCCGCCACCACCCCAAAAACCGCACCCA CCCATTTCGGCGCGACCGCGGGGGTGGGGTTTTGGGTTCAAAACCACACGCGAGTTTTCG TTTCGCTTGCGCGCGCGTTGTGGGGGAGAGAGAGGGGATGGCTCCCTTCGGCGATGGCGG CGGCGGCGGAGGGGAGGAGGAGAAGAGGGAGGGGGATGCGGGGTGGGGGTGGGACCCGAT GAGGAGCGGCAGCGCGCCGCCGACCATGGAGGGCGCCGCGGCGGCGGCGGCTTCGGCGGT GGCGCAGCAGGAGGTGGAGGGGGTTTACGGGGGCGGCGGAGGCGGCGGCGGCGGGTCGTT CTTCTCCGGGATGGATGGGTTCGGCGCGAGGCTCGACGAGGTCGGCCGGCGGCGCGGCGC CGCCGCGCAGGATCATTTTGGAAATTCTGAGTCATTATCTAATGGAGCACCAGGCCTCCA CCTTAATGGTACGAGAGAGTTTAATGGACAGCAATTTGGACCAACCCGGGTTCATAGTGT TGGCGCTATGCTGGATCACTCTGCAGTTAATGTTGGTTCCCCATGGATACAGACCAAAAC AGATGATGCTGACTTTCATAGGCATGCCGAGAATCGCTTCATGCCAAACATGGGAAAGAT GAATGCTTTTGCTAGAAGGGACCTTCAGTCCACCTATCTCTCTGACTCTGATCTTTCAAA TGCTTTATCTAGGGTGAACTTGTCTAATCATTTAGAATATGATGAAAGGGGCCTTGCCAA AGACCTGCTTGATGAAATGGAAATGCGTAATCACGACAGGCATTTTTCCTCTAAGATTGC CAATGACTGCCGTTCTCCTTTATCTGGCAATGCTTTGTGTACGCTTGGTTGTGAGCACTT GGATGTTCATTCACTACCTTCATATGGAGATGGTCTTCTACGCAGGCAGAACAGTATTAT GGATAGTCCCTATGTTTCAAGGAATAATAACCATCACATGAAGAATGTGGATCGCCTATC TCTTGCTGATCAACTAGCTTTGATGCAGCTAAGCAATCTTGACGAGAATAATTACCATAG CAATGCAGATATGGTAAATATAATCAACCCCTTGAGAAACAGACGCAACATCACAGACTT GGACTTAATCAGGAGTAGGAACCATTTCCTTGAAGAACTTATTGCACAGCGTTGTTTGCA GGAAGATAATGTCTTTCAGTCAAAATCTGGTCCCTCATATAATGACAACATACTATATCA TGATGGACCTCGTTTTCCATATTCAAGAATGCAAAGATCAGGGTCCCATGCTTATTCACA TTTGAGGGGCATTCCATATCTTGGTGATCAGCAATCGCGGATGTTATCCTCTAGTAGGAG GACACCTGGTAGAAATATGGGATCACAAATCTACCAAGATAATCCTGTAGCAAACTGCCT GGATCTGTCTTCTTTGGATCTTGCAAATAGAAGTGGTGCTTGTCCCTTGGAGCTTGTTAA TGTAGTGGGCCATGTTATGGAAGTTAGTATGGATCAATTTGGAAGTCGTTTTATTCAACA AAAACTAGAGGTTGCCTCAGCTGATGACAGGGAAAAAATCTTTCCAGAGATACTGACCAA TGCTATTGCTCTGACAACTGATGTATTTGGCAATTATGTGATTCAGAAGTTTTTTGAGTT TGCTACAGAAAGCCAGTTAAGCCAGTTAGCAGATCAGCTCAGAGGTCACTTTTTGCAACT CAGCTTTCAGATGTATGGTTGCAGAGTTGTTCAGAAGGTAAGTTATCTTTTTTTTTCTTG GGGTTCATGTAAATCTGTAACCCATGCAAACTCTACAAGTTTATAATCAATTTCCTACAA GTTTATTGTGGACAGCAGTGTAGTCTCCTAAAGTAAATCTGTTAGTAATGTACAAAAAAG AATTTTAATGTACACAAAAATAATTTGAGTGGAAGCCTGAACCAAGATTAAATCATCCGC TGCTTTTAACACTCAATCTTATCTCACTACTAGCATTGAGCTAATGTGTAAAAGCTACAA TTGATGACAAATGATTTACCATTTATGATTTTTCTAATTGTTATGTGGCAAATCATTTTT TCATGGTGGCTGACAAGAGATAATGAATCTCTGTTTATTAAAAAAAATGAACATGCTTTG TTCTTTGTTTGCGTTATGAGCGTTATGTCTTCACCAAAAGTCCATGCATGGAATGCCACC TTAACTAAAATTGGTGTCACTCTGTCAGCATTATGAGTGAGACATTGATGAGGCACGAGT CATTTCACTTTAGAGGTGCTTGATTGGAATTTTATCCATGCATTTGCCACAGGTCATTGA TGTGGTTGACTTGGAGAGAAAGATATCTATTGTTGGTGAGCTTAAGAATTCTGTTCTCAG ATGTATTTCTGATCAGAATGGTAACCACGTAATCCAGAAGTGCATAGAGTGTGTTCCAGA AGATCACATTCCATTTGTAATTGAGGATATACTTCAGAAAATTTATCCGCTTTGCACTCA CCAATATGGCTGCAGAGTTATTCAGGTACAAATTGCAACCTTCTGTTTCCTAAGCATTAA ATTCTGTAACTTTAAATGGTAGTTTCTAACCTTATCTTTGCAGAGAGTTTTGGAGCATTG CCATAATCCAGCAACTCAAAGTGCTGTGATGGATGAAATTGTCGAACGTGCTTTTGATTT GACAGAAGATAAATTTGGAAACTATGTTGTTCAACACGTCTTAGAACATGGTAGGCCAGA GGAGCGGTCATCCATTATTCAAAAGCTTTCTGGGCAAGTGGTGAACTTGAGCCAGCAGAA GTATGCTTCTAATGTTGTGGAAAAGTGTCTATCTTTTGGAACTCCTGATGAACGTGAAGG CCTTATAAGAGAGATTGTATCCTCTGGCCAAACATTCCAGGGACTGATGAAGGATCAGTT TGGCAATTATGTTGTACAGAGAATCCTTCAGACATGTGATGACAAATTCCTAGTTGTGAT CCTCTCAAGCATCAAGATGCATTTGAACGAACTGAAGAACTACACTTTCGGGAAGCATAT AGTTGCGCGTGTGGAGAAGTTAATCATTACAGGAGAAAACCGAGTGCGGATGGGGTCCAA GACTAGCCAATGTCAGCAGTCACTAAGCTGTACAGATGTTGACGCTAATCCTTTTTAAGC ATTGGCATCAATAAGCAAATCTGGTGAATTGACAAATGTGGAGATTTTTGTTTTGAGATA CACTGTAATAGCCAATAGGGGTGTCCTGGTGGAGACTGGATGTGTTCTCTTCTTTTTTAC TGTGGCCTGTATAGATCTCTCCGGGTACTTAAAAGGTAATTAGATGAGTGTTAGGTATCG CCGCTGTAAATCTGTTTTTTGGCCATGTACAAGTTTACTGATGGGTATC