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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0189400-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:6053705:6054979:-1 gene:Os04g0189400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:defensin-like 9 description:Gamma Purothionin family protein. (Os04t0189400-01)
Sequence

ATGATATTGGCTCTCTTTATATATAAACCTCGCCACAATCACTTCAATTATCATAGTTAC
AAGGGATTCAATACTAGTGCCAAATTTGATCATCAACACAAAGACAAATCGATCAAAATG
GAGACATCACGCAAGTTCTTCCCAACAATTGTAGTTCTCCTCCTGCTCGTTGTCACCACA
GCTGCACAGGCAAGGGAGTGCGAGACGCCAAGCAACGAGTTCAAGGGGATCTGCATGATG
GTGGCCAACTGCGCCAACGTGTGCCTGACTGAGGGCTTCTCCGGAGGCAAGTGCAGCGGC
TTCCGGCGCCGCTGCATGTGTACCAAGGATTGCTAG

Peptide Sequence

PEP ID

Os04t0189400-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:6053705:6054979:-1 gene:Os04g0189400 transcript:Os04t0189400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:defensin-like 9 description:Gamma Purothionin family protein. (Os04t0189400-01)
Sequence

MILALFIYKPRHNHFNYHSYKGFNTSAKFDHQHKDKSIKMETSRKFFPTIVVLLLLVVTT
AAQARECETPSNEFKGICMMVANCANVCLTEGFSGGKCSGFRRRCMCTKDC

Transcript Sequence

Transcript ID

Os04t0189400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:6053705:6054979:-1 gene:Os04g0189400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:defensin-like 9 description:Gamma Purothionin family protein. (Os04t0189400-01)
Sequence

GTTACTTGCATGATATTGGCTCTCTTTATATATAAACCTCGCCACAATCACTTCAATTAT
CATAGTTACAAGGGATTCAATACTAGTGCCAAATTTGATCATCAACACAAAGACAAATCG
ATCAAAATGGAGACATCACGCAAGTTCTTCCCAACAATTGTAGTTCTCCTCCTGCTCGTT
GTCACCACAGCTGCACAGGCAAGGGAGTGCGAGACGCCAAGCAACGAGTTCAAGGGGATC
TGCATGATGGTGGCCAACTGCGCCAACGTGTGCCTGACTGAGGGCTTCTCCGGAGGCAAG
TGCAGCGGCTTCCGGCGCCGCTGCATGTGTACCAAGGATTGCTAGTCAAGTGGTTAATCC
AAATAACTGCGCAAAATTGCAACCTATCTATCTTGCATGCTTCAATGAATAAACCTTCTC
TCTAATAGAGCCAGAAGGTTTTCATTCATCTCGGCTACAATACTACCTGTAACAATTTTC
TGTTTCATGTAATCTTTTCTTTCTATTTTTTGTGGTTTGAGTATTAATTGTATTGTTTTT
TCTTTTGTTGAAGATAATTAACCCCAATTCGATTC